Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2497c_(pdhA)_2811003_2812106
DateWed Aug 7 12:50:12 BST 2019
Unique Job ID58f97dcdfdcf8fa4
SequenceMGEGSRRPSG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:54.265 Y:55.727 Z:77.570
Model (left) based on template d1qs0a_
Top template information
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
Confidence and coverage
Confidence:100.0% Coverage: 95%
350 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1qs0a_
100.0 32
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
2d1umda_
100.0 40
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
3d1w85a_
100.0 36
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
4d2bfda1
100.0 35
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
5d2ozla1
100.0 26
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
6c2yicC_
100.0 18
PDB header:lyase
Chain: C: PDB Molecule:2-oxoglutarate decarboxylase;
PDBTitle: crystal structure of the suca domain of mycobacterium smegmatis2 alpha-ketoglutarate decarboxylase (triclinic form)
7c2xt6B_
100.0 17
PDB header:lyase
Chain: B: PDB Molecule:2-oxoglutarate decarboxylase;
PDBTitle: crystal structure of mycobacterium smegmatis alpha-ketoglutarate2 decarboxylase homodimer (orthorhombic form)
8c2jgdA_
100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-oxoglutarate dehydrogenase e1 component;
PDBTitle: e. coli 2-oxoglutarate dehydrogenase (e1o)
9d1gpua1
100.0 21
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
10d2r8oa2
100.0 20
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
11d1r9ja2
100.0 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
12d1itza1
100.0 18
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
13c4c7vA_
100.0 18
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: apo transketolase from lactobacillus salivarius at 2.2a resolution
14c5nd5A_
100.0 18
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase from chlamydomonas reinhardtii in2 complex with tpp and mg2+
15c5vrbB_
100.0 18
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: crystal structure of a transketolase from neisseria gonorrhoeae
16c3mosA_
100.0 19
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: the structure of human transketolase
17c1itzC_
100.0 18
PDB header:transferase
Chain: C: PDB Molecule:transketolase;
PDBTitle: maize transketolase in complex with tpp
18c3rimA_
100.0 19
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of mycobacterium tuberculosis transketolase2 (rv1449c)
19c1tkcA_
100.0 20
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: specificity of coenzyme binding in thiamin diphosphate2 dependent enzymes: crystal structures of yeast3 transketolase in complex with analogs of thiamin4 diphosphate
20c5hgxA_
100.0 17
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase mutant - h261f from pichia stipitis
21c3m7iA_
not modelled 100.0 17
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase in complex with thiamine2 diphosphate, ribose-5-phosphate(pyranose form) and magnesium ion
22c2r8pA_
not modelled 100.0 20
PDB header:transferase
Chain: A: PDB Molecule:transketolase 1;
PDBTitle: transketolase from e. coli in complex with substrate d-fructose-6-2 phosphate
23c1r9jB_
not modelled 100.0 18
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: transketolase from leishmania mexicana
24c3uk1A_
not modelled 100.0 24
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of a transketolase from burkholderia thailandensis2 with an oxidized cysteinesulfonic acid in the active site
25c2e6kB_
not modelled 100.0 20
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: x-ray structure of thermus thermopilus hb8 tt0505
26c3hylB_
not modelled 100.0 20
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase from bacillus anthracis
27c2o1xA_
not modelled 100.0 19
PDB header:transferase
Chain: A: PDB Molecule:1-deoxy-d-xylulose-5-phosphate synthase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from deinococcus2 radiodurans
28c3komB_
not modelled 100.0 20
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: crystal structure of apo transketolase from francisella tularensis
29c2o1sC_
not modelled 100.0 18
PDB header:transferase
Chain: C: PDB Molecule:1-deoxy-d-xylulose-5-phosphate synthase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from2 escherichia coli
30c6ouwA_
not modelled 100.0 18
PDB header:transferase
Chain: A: PDB Molecule:1-deoxy-d-xylulose-5-phosphate synthase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate synthase (dxps) from deinococcus2 radiodurans with enamine intermediate bound
31c2g28A_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase e1 component;
PDBTitle: e. coli pyruvate dehydrogenase h407a variant2 phosphonolactylthiamin diphosphate complex
32d2ieaa2
not modelled 99.9 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
33c4qoyC_
not modelled 99.9 18
PDB header:oxidoreductase
Chain: C: PDB Molecule:pyruvate dehydrogenase e1 component;
PDBTitle: novel binding motif and new flexibility revealed by structural2 analysis of a pyruvate dehydrogenase-dihydrolipoyl acetyltransferase3 sub-complex from the escherichia coli pyruvate dehydrogenase multi-4 enzyme complex
34d2djia3
not modelled 99.9 21
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
35c2djiA_
not modelled 99.9 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate oxidase;
PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad
36c3ahhA_
not modelled 99.9 15
PDB header:lyase
Chain: A: PDB Molecule:xylulose 5-phosphate/fructose 6-phosphate phosphoketolase;
PDBTitle: h142a mutant of phosphoketolase from bifidobacterium breve complexed2 with acetyl thiamine diphosphate
37c1powA_
not modelled 99.8 23
PDB header:oxidoreductase(oxygen as acceptor)
Chain: A: PDB Molecule:pyruvate oxidase;
PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
38d1t9ba3
not modelled 99.8 20
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
39d1jsca3
not modelled 99.7 21
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
40c4k9qB_
not modelled 99.7 20
PDB header:lyase
Chain: B: PDB Molecule:benzoylformate decarboxylase;
PDBTitle: the crystal structure of benzoylformate decarboxylase from2 polynucleobacter necessarius
41c4q9dA_
not modelled 99.7 28
PDB header:lyase
Chain: A: PDB Molecule:benzoylformate decarboxylase;
PDBTitle: x-ray structure of a putative thiamin diphosphate-dependent enzyme2 isolated from mycobacterium smegmatis
42d2ez9a3
not modelled 99.7 24
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
43d1ybha3
not modelled 99.7 28
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
44d1q6za3
not modelled 99.7 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
45c2panF_
not modelled 99.6 23
PDB header:lyase
Chain: F: PDB Molecule:glyoxylate carboligase;
PDBTitle: crystal structure of e. coli glyoxylate carboligase
46d1ozha3
not modelled 99.6 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
47c6n2oB_
not modelled 99.6 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyruvate ferredoxin/flavodoxin oxidoreductase, beta
PDBTitle: 2-oxoglutarate:ferredoxin oxidoreductase from magnetococcus marinus2 with 2-oxoglutarate, coenzyme a and succinyl-coa bound
48d2ihta3
not modelled 99.6 22
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
49c3eyaE_
not modelled 99.6 26
PDB header:oxidoreductase
Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome];
PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli
50c4rjjB_
not modelled 99.6 22
PDB header:lyase
Chain: B: PDB Molecule:acetolactate synthase;
PDBTitle: acetolactate synthase from bacillus subtilis bound to thdp - crystal2 form ii
51c1t9dB_
not modelled 99.6 19
PDB header:transferase
Chain: B: PDB Molecule:acetolactate synthase, mitochondrial;
PDBTitle: crystal structure of yeast acetohydroxyacid synthase in complex with a2 sulfonylurea herbicide, metsulfuron methyl
52c1yi1A_
not modelled 99.6 26
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase;
PDBTitle: crystal structure of arabidopsis thaliana acetohydroxyacid synthase in2 complex with a sulfonylurea herbicide, tribenuron methyl
53c3ey9B_
not modelled 99.6 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyruvate dehydrogenase [cytochrome];
PDBTitle: structural basis for membrane binding and catalytic activation of the2 peripheral membrane enzyme pyruvate oxidase from escherichia coli
54c5ahkB_
not modelled 99.6 18
PDB header:transferase
Chain: B: PDB Molecule:acetolactate synthase ii, large subunit;
PDBTitle: crystal structure of acetohydroxy acid synthase pf5 from2 pseudomonas protegens
55c1upaC_
not modelled 99.5 24
PDB header:synthase
Chain: C: PDB Molecule:carboxyethylarginine synthase;
PDBTitle: carboxyethylarginine synthase from streptomyces2 clavuligerus (semet structure)
56c1jscA_
not modelled 99.5 21
PDB header:lyase
Chain: A: PDB Molecule:acetohydroxy-acid synthase;
PDBTitle: crystal structure of the catalytic subunit of yeast2 acetohydroxyacid synthase: a target for herbicidal3 inhibitors
57c2ag1A_
not modelled 99.5 22
PDB header:lyase
Chain: A: PDB Molecule:benzaldehyde lyase;
PDBTitle: crystal structure of benzaldehyde lyase (bal)- semet
58d2ji7a3
not modelled 99.5 20
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
59d1pvda3
not modelled 99.5 18
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
60c2v3wC_
not modelled 99.5 23
PDB header:lyase
Chain: C: PDB Molecule:benzoylformate decarboxylase;
PDBTitle: crystal structure of the benzoylformate decarboxylase variant l461a2 from pseudomonas putida
61d1ovma3
not modelled 99.5 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
62c2vbgB_
not modelled 99.5 23
PDB header:lyase
Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase;
PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp
63c2w93A_
not modelled 99.5 19
PDB header:lyase
Chain: A: PDB Molecule:pyruvate decarboxylase isozyme 1;
PDBTitle: crystal structure of the saccharomyces cerevisiae pyruvate2 decarboxylase variant e477q in complex with the surrogate pyruvamide
64c2nxwB_
not modelled 99.5 23
PDB header:lyase
Chain: B: PDB Molecule:phenyl-3-pyruvate decarboxylase;
PDBTitle: crystal structure of phenylpyruvate decarboxylase of azospirillum2 brasilense
65c1ozhD_
not modelled 99.5 16
PDB header:lyase
Chain: D: PDB Molecule:acetolactate synthase, catabolic;
PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate.
66c2pgnA_
not modelled 99.5 24
PDB header:hydrolase
Chain: A: PDB Molecule:cyclohexane-1,2-dione hydrolase (cdh);
PDBTitle: the crystal structure of fad and thdp-dependent cyclohexane-1,2-dione2 hydrolase in complex with cyclohexane-1,2-dione
67c2ji6B_
not modelled 99.5 19
PDB header:lyase
Chain: B: PDB Molecule:oxalyl-coa decarboxylase;
PDBTitle: x-ray structure of oxalyl-coa decarboxylase in complex with 3-deaza-2 thdp and oxalyl-coa
68c2q27B_
not modelled 99.5 16
PDB header:lyase
Chain: B: PDB Molecule:oxalyl-coa decarboxylase;
PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
69c2x7jA_
not modelled 99.4 21
PDB header:transferase
Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene
PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis
70c2jlaD_
not modelled 99.4 22
PDB header:transferase
Chain: D: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene
PDBTitle: crystal structure of e.coli mend, 2-succinyl-5-enolpyruvyl-2 6-hydroxy-3-cyclohexadiene-1-carboxylate synthase - semet3 protein
71c1zpdA_
not modelled 99.4 25
PDB header:alcohol fermentation
Chain: A: PDB Molecule:pyruvate decarboxylase;
PDBTitle: pyruvate decarboxylase from zymomonas mobilis
72c3lq1A_
not modelled 99.4 18
PDB header:transferase
Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-2 carboxylic acid synthase/2-oxoglutarate decarboxylase from listeria3 monocytogenes str. 4b f2365
73d1zpda3
not modelled 99.4 23
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
74c1ovmC_
not modelled 99.4 21
PDB header:lyase
Chain: C: PDB Molecule:indole-3-pyruvate decarboxylase;
PDBTitle: crystal structure of indolepyruvate decarboxylase from2 enterobacter cloacae
75c5essB_
not modelled 99.4 17
PDB header:transferase
Chain: B: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
PDBTitle: crystal structure of m. tuberculosis mend bound to mg2+ and covalent2 intermediate i (a thdp and decarboxylated 2-oxoglutarate adduct)
76c5b46B_
not modelled 99.4 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:2-oxoacid--ferredoxin oxidoreductase beta subunit;
PDBTitle: 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai - ligand2 free form
77c2vbiF_
not modelled 99.4 24
PDB header:lyase
Chain: F: PDB Molecule:pyruvate decarboxylase;
PDBTitle: holostructure of pyruvate decarboxylase from acetobacter pasteurianus
78c5c4iC_
not modelled 99.0 14
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxalate oxidoreductase subunit beta;
PDBTitle: structure of an oxalate oxidoreductase
79d2c42a2
not modelled 98.3 18
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:PFOR PP module
80c6cipD_
not modelled 97.8 21
PDB header:oxidoreductase
Chain: D: PDB Molecule:pyruvate-ferredoxin oxidoreductase;
PDBTitle: pyruvate:ferredoxin oxidoreductase from moorella thermoacetica with2 acetyl-tpp bound
81d1zpda2
not modelled 97.5 14
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
82d1pvda2
not modelled 97.3 11
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
83d2djia2
not modelled 97.3 18
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
84c5b47A_
not modelled 97.2 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-oxoacid--ferredoxin oxidoreductase alpha subunit;
PDBTitle: 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai -2 pyruvate complex
85c5b48A_
not modelled 97.2 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-oxoacid--ferredoxin oxidoreductase alpha subunit;
PDBTitle: 2-oxoacid:ferredoxin oxidoreductase 1 from sulfolobus tokodai
86c6n2nA_
not modelled 97.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate flavodoxin/ferredoxin oxidoreductase domain
PDBTitle: crystal structure of 2-oxoglutarate:ferredoxin oxidoreductase from2 magnetococcus marinus
87d2ez9a2
not modelled 97.0 14
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
88d2ji7a2
not modelled 96.9 17
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
89d1t9ba2
not modelled 96.8 17
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
90d2c42a1
not modelled 96.8 13
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:PFOR Pyr module
91d2r8oa1
not modelled 96.6 13
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
92d1ozha2
not modelled 96.4 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
93d1ybha2
not modelled 96.3 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
94d2ihta2
not modelled 96.3 14
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
95d1itza2
not modelled 96.3 9
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
96d1r9ja1
not modelled 96.2 13
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
97c4wbxC_
not modelled 96.2 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:2-keto acid:ferredoxin oxidoreductase subunit alpha;
PDBTitle: conserved hypothetical protein pf1771 from pyrococcus furiosus solved2 by sulfur sad using swiss light source data
98c2c3yA_
not modelled 96.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase;
PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus
99d1q6za2
not modelled 95.9 17
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
100d1gpua2
not modelled 95.7 12
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
101d1ovma2
not modelled 95.1 11
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
102c5c4iA_
not modelled 94.7 5
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxalate oxidoreductase subunit alpha;
PDBTitle: structure of an oxalate oxidoreductase
103c1yd7A_
not modelled 67.8 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-keto acid:ferredoxin oxidoreductase subunit alpha;
PDBTitle: conserved hypothetical protein pfu-1647980-001 from pyrococcus2 furiosus
104d1on3a2
not modelled 55.7 20
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
105c1ik6A_
not modelled 52.5 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase;
PDBTitle: 3d structure of the e1beta subunit of pyruvate2 dehydrogenase from the archeon pyrobaculum aerophilum
106d1ugpa_
not modelled 48.8 10
Fold:Nitrile hydratase alpha chain
Superfamily:Nitrile hydratase alpha chain
Family:Nitrile hydratase alpha chain
107d1e5xa_
not modelled 48.7 18
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
108c5cw9A_
not modelled 47.5 28
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed ferredoxin-ferredoxin domain insertion
PDBTitle: crystal structure of de novo designed ferredoxin-ferredoxin domain2 insertion protein
109c1olsB_
not modelled 47.5 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit;
PDBTitle: roles of his291-alpha and his146-beta' in the reductive acylation2 reaction catalyzed by human branched-chain alpha-ketoacid3 dehydrogenase
110d1umdb1
not modelled 46.6 18
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
111d1ik6a1
not modelled 44.0 21
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
112c1vrgE_
not modelled 43.8 18
PDB header:ligase
Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit;
PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution
113d2a7sa2
not modelled 43.3 18
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
114d2a7sa1
not modelled 40.7 17
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
115d1w85b1
not modelled 40.3 11
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
116d1vrga2
not modelled 40.3 19
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
117c6e28D_
not modelled 40.3 16
PDB header:signaling protein
Chain: D: PDB Molecule:caspase recruitment domain-containing protein 9;
PDBTitle: the card9 card domain-swapped dimer
118d2pjua1
not modelled 39.8 14
Fold:Chelatase-like
Superfamily:PrpR receptor domain-like
Family:PrpR receptor domain-like
119d1xnya2
not modelled 39.1 14
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
120c4l6wB_
not modelled 38.9 11
PDB header:ligase
Chain: B: PDB Molecule:probable propionyl-coa carboxylase beta chain 6;
PDBTitle: carboxyltransferase subunit (accd6) of mycobacterium tuberculosis2 acetyl-coa carboxylase

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite