1 c6n6jB_
100.0
48
PDB header: rna binding protein/rnaChain: B: PDB Molecule: rna exonuclease 2 homolog,small fragment nuclease;
PDBTitle: human rexo2 bound to paa
2 c6n6dA_
100.0
43
PDB header: rna binding protein/rnaChain: A: PDB Molecule: oligoribonuclease;
PDBTitle: vibrio cholerae oligoribonuclease bound to pag
3 c5cy4C_
100.0
42
PDB header: oxidoreductaseChain: C: PDB Molecule: oligoribonuclease;
PDBTitle: crystal structure of an oligoribonuclease from acinetobacter baumannii
4 c6a4dA_
100.0
41
PDB header: hydrolaseChain: A: PDB Molecule: oligoribonuclease;
PDBTitle: pnp-tmp bound oligoribonuclease (orn) from colwellia psychrerythraea2 strain 34h
5 c3tr8A_
100.0
41
PDB header: hydrolaseChain: A: PDB Molecule: oligoribonuclease;
PDBTitle: structure of an oligoribonuclease (orn) from coxiella burnetii
6 d1j9aa_
100.0
42
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
7 d2igia1
100.0
46
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
8 c2gbzA_
100.0
45
PDB header: hydrolaseChain: A: PDB Molecule: oligoribonuclease;
PDBTitle: the crystal structure of xc847 from xanthomonas campestris: a 3-52 oligoribonuclease of dnaq fold family with a novel opposingly-shifted3 helix
9 c5z9xA_
100.0
19
PDB header: plant protein/rnaChain: A: PDB Molecule: small rna degrading nuclease 1;
PDBTitle: arabidopsis small rna degrading nuclease 1 in complex with an rna2 substrate
10 d2qxfa1
100.0
16
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
11 d1y97a1
100.0
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
12 c4rg8A_
100.0
24
PDB header: hydrolaseChain: A: PDB Molecule: exonuclease i;
PDBTitle: structural and biochemical studies of a moderately thermophilic2 exonuclease i from methylocaldum szegediense
13 d3b6oa1
100.0
12
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
14 c3u6fA_
99.9
11
PDB header: hydrolase/dnaChain: A: PDB Molecule: three prime repair exonuclease 1;
PDBTitle: mouse trex1 d200n mutant
15 c5fkvD_
99.9
21
PDB header: transferaseChain: D: PDB Molecule: dna polymerase iii epsilon;
PDBTitle: cryo-em structure of the e. coli replicative dna polymerase complex2 bound to dna (dna polymerase iii alpha, beta, epsilon, tau complex)
16 d1w0ha_
99.9
14
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
17 d2guia1
99.9
23
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
18 d2f96a1
99.9
16
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
19 c3cm6A_
99.9
14
PDB header: hydrolase, apoptosisChain: A: PDB Molecule: cell death-related nuclease 4;
PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er
20 d1wlja_
99.9
21
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
21 c2p1jB_
not modelled
99.9
16
PDB header: transferaseChain: B: PDB Molecule: dna polymerase iii polc-type;
PDBTitle: crystal structure of a polc-type dna polymerase iii exonuclease domain2 from thermotoga maritima
22 c2xriA_
not modelled
99.9
9
PDB header: hydrolaseChain: A: PDB Molecule: eri1 exoribonuclease 3;
PDBTitle: crystal structure of human eri1 exoribonuclease 3
23 c1zbhA_
not modelled
99.9
14
PDB header: hydrolase/rnaChain: A: PDB Molecule: 3'-5' exonuclease eri1;
PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease
24 c1zbuB_
not modelled
99.9
16
PDB header: hydrolaseChain: B: PDB Molecule: 3'-5' exonuclease eri1;
PDBTitle: crystal structure of full-length 3'-exonuclease
25 c5l80B_
not modelled
99.9
12
PDB header: rna binding proteinChain: B: PDB Molecule: maternal protein exuperantia,maternal protein exuperantia;
PDBTitle: structure of exuperantia exo-like and sam-like domains
26 c4fzxC_
not modelled
99.9
16
PDB header: hydrolase/dnaChain: C: PDB Molecule: exodeoxyribonuclease 10;
PDBTitle: exonuclease x in complex with 3' overhanging duplex dna
27 c4wbqA_
not modelled
99.8
13
PDB header: rna binding proteinChain: A: PDB Molecule: qde-2-interacting protein;
PDBTitle: crystal structure of the exonuclease domain of qip (qde-2 interacting2 protein) solved by native-sad phasing.
28 c2is3B_
not modelled
99.8
14
PDB header: hydrolaseChain: B: PDB Molecule: ribonuclease t;
PDBTitle: crystal structure of escherichia coli rnase t
29 c4czwA_
not modelled
99.8
17
PDB header: gene regulationChain: A: PDB Molecule: pab-dependent poly(a)-specific ribonuclease subunit pan2;
PDBTitle: structure of the neurospora crassa pan2 catalytic unit (protease and2 nuclease domain)
30 c4q8jA_
not modelled
99.7
18
PDB header: hydrolaseChain: A: PDB Molecule: pab-dependent poly(a)-specific ribonuclease subunit pan2;
PDBTitle: structure of the saccharomyces cerevisiae pan2-pan3 core complex
31 c6r5kA_
not modelled
99.6
17
PDB header: rna binding proteinChain: A: PDB Molecule: pan2-pan3 deadenylation complex catalytic subunit pan2;
PDBTitle: cryo-em structure of a poly(a) rnp bound to the pan2-pan3 deadenylase
32 c4hecB_
not modelled
99.3
15
PDB header: unknown functionChain: B: PDB Molecule: putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium tuberculosis
33 d1uoca_
not modelled
99.1
14
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: CAF1-like ribonuclease
34 c2kzzA_
not modelled
98.9
19
PDB header: transferase/dnaChain: A: PDB Molecule: protein (dna polymerase i);
PDBTitle: klenow fragment with normal substrate and zinc only
35 d1kfsa1
not modelled
98.9
16
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
36 d2d5ra1
not modelled
98.9
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: CAF1-like ribonuclease
37 c2p51A_
not modelled
98.9
20
PDB header: hydrolase, gene regulationChain: A: PDB Molecule: spcc18.06c protein;
PDBTitle: crystal structure of the s. pombe pop2p deadenylation subunit
38 c4gmjB_
not modelled
98.8
15
PDB header: rna binding proteinChain: B: PDB Molecule: ccr4-not transcription complex subunit 7;
PDBTitle: structure of human not1 mif4g domain co-crystallized with caf1
39 d1x9ma1
not modelled
98.7
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
40 c3d45B_
not modelled
98.5
17
PDB header: hydrolaseChain: B: PDB Molecule: poly(a)-specific ribonuclease parn;
PDBTitle: crystal structure of mouse parn in complex with m7gpppg
41 c2a1sC_
not modelled
98.5
17
PDB header: hydrolaseChain: C: PDB Molecule: poly(a)-specific ribonuclease parn;
PDBTitle: crystal structure of native parn nuclease domain
42 c1tk0A_
not modelled
98.5
15
PDB header: transferase/electron transport/dnaChain: A: PDB Molecule: dna polymerase;
PDBTitle: t7 dna polymerase ternary complex with 8 oxo guanosine and ddctp at2 the insertion site
43 c5dkuB_
not modelled
98.4
12
PDB header: transferaseChain: B: PDB Molecule: prex dna polymerase;
PDBTitle: c-terminal his tagged appol exonuclease mutant
44 c1njzA_
not modelled
98.3
8
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase i;
PDBTitle: cytosine-thymine mismatch at the polymerase active site
45 d2hhva1
not modelled
98.2
10
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
46 c4x0pB_
not modelled
98.1
12
PDB header: transferase/dnaChain: B: PDB Molecule: dna polymerase theta;
PDBTitle: ternary complex of human dna polymerase theta c-terminal domain2 binding ddatp opposite a tetrahydrofuran ap site analog
47 c2gv9B_
not modelled
98.1
18
PDB header: transferaseChain: B: PDB Molecule: dna polymerase;
PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase
48 c2gv9A_
not modelled
98.1
19
PDB header: transferaseChain: A: PDB Molecule: dna polymerase;
PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase
49 c5okiA_
not modelled
98.0
14
PDB header: replicationChain: A: PDB Molecule: dna polymerase epsilon catalytic subunit a;
PDBTitle: crystal structure of the ctf18-1-8 module from ctf18-rfc in complex2 with a 63 kda fragment of dna polymerase epsilon
50 d1wn7a1
not modelled
98.0
13
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
51 c3iayA_
not modelled
98.0
16
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase delta catalytic subunit;
PDBTitle: ternary complex of dna polymerase delta
52 d1tgoa1
not modelled
97.9
13
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
53 c6fwkB_
not modelled
97.9
17
PDB header: dna binding proteinChain: B: PDB Molecule: dna polymerase epsilon catalytic subunit a;
PDBTitle: the crystal structure of pol2core-m644g in complex with dna and an2 incoming nucleotide
54 c4m8oA_
not modelled
97.9
12
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase epsilon catalytic subunit a;
PDBTitle: ternary complex of dna polymerase epsilon with an incoming datp
55 d1d5aa1
not modelled
97.8
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
56 d1qhta1
not modelled
97.7
12
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
57 c5exrG_
not modelled
97.5
15
PDB header: replicationChain: G: PDB Molecule: dna polymerase alpha catalytic subunit;
PDBTitle: crystal structure of human primosome
58 c2vwkA_
not modelled
97.5
12
PDB header: dna replicationChain: A: PDB Molecule: dna polymerase;
PDBTitle: uracil recognition in archaeal dna polymerases captured by2 x-ray crystallography. v93q polymerase variant
59 c5zo4B_
not modelled
97.4
20
PDB header: hydrolaseChain: B: PDB Molecule: putative 3'-5' exonuclease family protein;
PDBTitle: inactive state of the nuclease
60 d1ih7a1
not modelled
97.3
13
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
61 c5mdnB_
not modelled
97.3
20
PDB header: transferaseChain: B: PDB Molecule: dna polymerase;
PDBTitle: structure of the family b dna polymerase from the hyperthermophilic2 archaeon pyrobaculum calidifontis
62 c5c0xK_
not modelled
97.2
15
PDB header: hydrolase/rnaChain: K: PDB Molecule: exosome complex exonuclease rrp6;
PDBTitle: structure of a 12-subunit nuclear exosome complex bound to structured2 rna
63 c1d5aA_
not modelled
97.2
16
PDB header: transferaseChain: A: PDB Molecule: protein (dna polymerase);
PDBTitle: crystal structure of an archaebacterial dna polymerase2 d.tok. deposition of second native structure at 2.43 angstrom
64 c4fydA_
not modelled
97.2
8
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase alpha catalytic subunit a;
PDBTitle: crystal structure of yeast dna polymerase alpha bound to dna/rna and2 dgtp
65 d1noya_
not modelled
97.1
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
66 d1s5ja1
not modelled
97.1
19
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
67 c5n2hA_
not modelled
97.1
6
PDB header: transferaseChain: A: PDB Molecule: dna polymerase;
PDBTitle: structure of the e9 dna polymerase exonuclease deficient mutant2 (d166a+e168a) from vaccinia virus
68 c4xviA_
not modelled
97.0
12
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase nu;
PDBTitle: binary complex of human polymerase nu and dna with the finger domain2 ajar
69 d1q8ia1
not modelled
97.0
16
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
70 c4q5vA_
not modelled
96.9
14
PDB header: transferase/dna/rnaChain: A: PDB Molecule: dna polymerase alpha catalytic subunit;
PDBTitle: crystal structure of the catalytic core of human dna polymerase alpha2 in ternary complex with an rna-primed dna template and aphidicolin
71 d1yt3a3
not modelled
96.9
13
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
72 c1s5jA_
not modelled
96.8
21
PDB header: transferaseChain: A: PDB Molecule: dna polymerase i;
PDBTitle: insight in dna replication: the crystal structure of dna2 polymerase b1 from the archaeon sulfolobus solfataricus
73 c2e6mA_
not modelled
96.7
13
PDB header: hydrolaseChain: A: PDB Molecule: werner syndrome atp-dependent helicase homolog;
PDBTitle: structure of mouse werner exonuclease domain
74 c2dtuA_
not modelled
96.5
13
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase;
PDBTitle: crystal structure of the beta hairpin loop deletion variant of rb692 gp43 in complex with dna containing an abasic site analog
75 c6k1dB_
not modelled
96.5
16
PDB header: hydrolaseChain: B: PDB Molecule: exonuclease 3'-5' domain-containing protein 2;
PDBTitle: crystal structure of exd2 exonuclease domain soaked in mn and gmp
76 c1yt3A_
not modelled
96.5
14
PDB header: hydrolase,translationChain: A: PDB Molecule: ribonuclease d;
PDBTitle: crystal structure of escherichia coli rnase d, an2 exoribonuclease involved in structured rna processing
77 c4ktqA_
not modelled
96.3
14
PDB header: transferase/dnaChain: A: PDB Molecule: protein (large fragment of dna polymerase i);
PDBTitle: binary complex of the large fragment of dna polymerase i2 from t. aquaticus bound to a primer/template dna
78 c5af0B_
not modelled
96.1
13
PDB header: unknown proteinChain: B: PDB Molecule: maelstrom;
PDBTitle: mael domain from bombyx mori maelstrom
79 c4oo1J_
not modelled
95.4
17
PDB header: hydrolase/rnaChain: J: PDB Molecule: exosome complex exonuclease rrp6;
PDBTitle: structure of an rrp6-rna exosome complex bound to poly(a) rna
80 c1q8iA_
not modelled
94.9
15
PDB header: transferaseChain: A: PDB Molecule: dna polymerase ii;
PDBTitle: crystal structure of escherichia coli dna polymerase ii
81 d2hbka2
not modelled
94.8
19
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
82 c4ybgA_
not modelled
94.4
13
PDB header: hydrolaseChain: A: PDB Molecule: protein maelstrom;
PDBTitle: crystal structure of the mael domain of drosophila melanogaster2 maelstrom
83 c3cymA_
not modelled
91.5
13
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein bad_0989;
PDBTitle: crystal structure of protein bad_0989 from bifidobacterium2 adolescentis
84 c3ikmD_
not modelled
91.0
27
PDB header: transferaseChain: D: PDB Molecule: dna polymerase subunit gamma-1;
PDBTitle: crystal structure of human mitochondrial dna polymerase holoenzyme
85 c4ztuA_
not modelled
90.0
27
PDB header: dna binding protein/dnaChain: A: PDB Molecule: dna polymerase subunit gamma-1;
PDBTitle: structural basis for processivity and antiviral drug toxicity in human2 mitochondrial dna replicase
86 c4nlbA_
not modelled
78.2
13
PDB header: hydrolaseChain: A: PDB Molecule: ribosomal rna processing protein 6;
PDBTitle: crystal structure of the catalytic core of rrp6 from trypanosoma2 brucei
87 d2py5a1
not modelled
70.4
17
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
88 c2hbkA_
not modelled
70.3
18
PDB header: hydrolase, gene regulationChain: A: PDB Molecule: exosome complex exonuclease rrp6;
PDBTitle: structure of the yeast nuclear exosome component, rrp6p, reveals an2 interplay between the active site and the hrdc domain; protein in3 complex with mn
89 c5c0wK_
not modelled
65.5
17
PDB header: hydrolase/rnaChain: K: PDB Molecule: exosome complex exonuclease rrp6;
PDBTitle: structure of a 12-subunit nuclear exosome complex bound to single-2 stranded rna substrates
90 d1vk0a_
not modelled
58.6
13
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: DnaQ-like 3'-5' exonuclease
91 c3sahA_
not modelled
55.0
14
PDB header: hydrolaseChain: A: PDB Molecule: exosome component 10;
PDBTitle: crystal structure of the human rrp6 catalytic domain with y436a2 mutation in the catalytic site
92 c2ex3I_
not modelled
38.7
19
PDB header: transferase/replicationChain: I: PDB Molecule: dna polymerase;
PDBTitle: bacteriophage phi29 dna polymerase bound to terminal protein
93 c5v5fA_
not modelled
18.2
11
PDB header: transferaseChain: A: PDB Molecule: at3g11770;
PDBTitle: crystal structure of rice1 (pnt2)
94 d3bzka5
not modelled
12.9
25
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Tex RuvX-like domain-like
95 c3bdvB_
not modelled
11.7
19
PDB header: hydrolaseChain: B: PDB Molecule: uncharacterized protein duf1234;
PDBTitle: crystal structure of a putative yden-like hydrolase (eca3091) from2 pectobacterium atrosepticum scri1043 at 1.66 a resolution
96 d1hpla2
not modelled
8.9
11
Fold: alpha/beta-HydrolasesSuperfamily: alpha/beta-HydrolasesFamily: Pancreatic lipase, N-terminal domain
97 d1ji8a_
not modelled
8.9
13
Fold: DsrC, the gamma subunit of dissimilatory sulfite reductaseSuperfamily: DsrC, the gamma subunit of dissimilatory sulfite reductaseFamily: DsrC, the gamma subunit of dissimilatory sulfite reductase
98 c4mf4F_
not modelled
8.9
31
PDB header: lyaseChain: F: PDB Molecule: hpch/hpai aldolase/citrate lyase family protein;
PDBTitle: crystal structure of a hpch/hpal aldolase/citrate lyase family protein2 from burkholderia cenocepacia j2315
99 d2v4jc1
not modelled
8.5
18
Fold: DsrC, the gamma subunit of dissimilatory sulfite reductaseSuperfamily: DsrC, the gamma subunit of dissimilatory sulfite reductaseFamily: DsrC, the gamma subunit of dissimilatory sulfite reductase