Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2515c_(-)_2831354_2832601
DateWed Aug 7 12:50:14 BST 2019
Unique Job ID7917e38d2eb8620e
SequenceVGIGHPMWVG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:52.256 Y:52.435 Z:54.946
Model (left) based on template c6cz6D_
Top template information
PDB header:transcription
Chain: D: PDB Molecule:hth-type transcriptional regulator prpr;
PDBTitle: mycobacterium tuberculosis transcriptional regulator
Confidence and coverage
Confidence: 99.9% Coverage: 38%
158 residues ( 38% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
254 residues ( 61%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6cz6D_



99.9 19
PDB header:transcription
Chain: D: PDB Molecule:hth-type transcriptional regulator prpr;
PDBTitle: mycobacterium tuberculosis transcriptional regulator
2c3dtkA_



99.9 25
PDB header:gene regulation
Chain: A: PDB Molecule:irre protein;
PDBTitle: crystal structure of the irre protein, a central regulator2 of dna damage repair in deinococcaceae
3c3ivpD_



99.4 18
PDB header:dna binding protein
Chain: D: PDB Molecule:putative transposon-related dna-binding protein;
PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
4c1y9qA_



99.4 35
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, hth_3 family;
PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae
5c4mcxE_



99.4 15
PDB header:toxin
Chain: E: PDB Molecule:antidote protein;
PDBTitle: p. vulgaris higba structure, crystal form 2
6c2ebyA_



99.4 16
PDB header:transcription
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq;
PDBTitle: crystal structure of a hypothetical protein from e. coli
7c3lisB_



99.4 20
PDB header:transcription
Chain: B: PDB Molecule:csp231i c protein;
PDBTitle: crystal structure of the restriction-modification controller protein2 c.csp231i (monoclinic form)
8c2bnoA_



99.4 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:epoxidase;
PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase from s.2 wedmorenis.
9c3op9A_



99.4 22
PDB header:transcription regulator
Chain: A: PDB Molecule:pli0006 protein;
PDBTitle: crystal structure of transcriptional regulator from listeria innocua
10c3cecA_



99.3 10
PDB header:transcription
Chain: A: PDB Molecule:putative antidote protein of plasmid maintenance system;
PDBTitle: crystal structure of a putative antidote protein of plasmid2 maintenance system (npun_f2943) from nostoc punctiforme pcc 73102 at3 1.60 a resolution
11d2icta1



99.3 12
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
12c4ybaA_



99.3 18
PDB header:gene regulation
Chain: A: PDB Molecule:regulatory protein c;
PDBTitle: the structure of the c.kpn2i controller protein
13c2mezA_



99.3 22
PDB header:rna binding protein
Chain: A: PDB Molecule:multiprotein bridging factor (mbp-like);
PDBTitle: flexible anchoring of archaeal mbf1 on ribosomes suggests role as2 recruitment factor
14c3mlfC_



99.3 17
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator;
PDBTitle: putative transcriptional regulator from staphylococcus aureus.
15c6b9tH_



99.3 18
PDB header:oxidoreductase
Chain: H: PDB Molecule:methylphosphonate synthase;
PDBTitle: crystal structure of mpns with substrate 2-hydroxyethylphosphonate (2-2 hep) and fe(ii) bound
16d1y9qa1



99.3 35
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Probable transcriptional regulator VC1968, N-terminal domain
17c1b0nA_



99.3 18
PDB header:transcription regulator
Chain: A: PDB Molecule:protein (sinr protein);
PDBTitle: sinr protein/sini protein complex
18c3trbA_



99.3 16
PDB header:dna binding protein
Chain: A: PDB Molecule:virulence-associated protein i;
PDBTitle: structure of an addiction module antidote protein of a higa (higa)2 family from coxiella burnetii
19c3bs3A_



99.3 16
PDB header:dna binding protein
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis
20d1rioa_



99.3 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
21c6b9rD_



not modelled 99.3 23
PDB header:oxidoreductase
Chain: D: PDB Molecule:hydroxyethylphosphonate dioxygenase;
PDBTitle: streptomyces albus hepd with substrate 2-hydroxyethylphosphonate (2-2 hep) and fe(ii) bound
22c3f52A_



not modelled 99.3 19
PDB header:transcription activator
Chain: A: PDB Molecule:clp gene regulator (clgr);
PDBTitle: crystal structure of the clp gene regulator clgr from c. glutamicum
23d2r1jl1



not modelled 99.3 16
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
24c2kpjA_



not modelled 99.3 13
PDB header:transcription regulator
Chain: A: PDB Molecule:sos-response transcriptional repressor, lexa;
PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
25c3vk0B_



not modelled 99.3 21
PDB header:dna binding protein
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of hypothetical transcription factor nhtf from2 neisseria
26c6f8sA_



not modelled 99.3 15
PDB header:toxin
Chain: A: PDB Molecule:xre family transcriptional regulator;
PDBTitle: toxin-antitoxin complex grata
27c5woqA_



not modelled 99.3 19
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator clgr;
PDBTitle: crystal structure of an xre family protein transcriptional regulator2 from mycobacterium smegmatis
28c3zhiA_



not modelled 99.3 19
PDB header:transcription
Chain: A: PDB Molecule:ci;
PDBTitle: n-terminal domain of the ci repressor from bacteriophage tp901-1
29c3omtA_



not modelled 99.3 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae.
30d1adra_



not modelled 99.3 15
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
31c4o8bA_



not modelled 99.3 18
PDB header:dna binding protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of transcriptional regulator bswr
32d2b5aa1



not modelled 99.3 19
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
33c2ewtA_



not modelled 99.3 25
PDB header:dna binding protein
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of the dna-binding domain of bldd
34d1utxa_



not modelled 99.2 19
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
35c3clcC_



not modelled 99.2 26
PDB header:transcription regulator/dna
Chain: C: PDB Molecule:regulatory protein;
PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
36d1y7ya1



not modelled 99.2 24
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
37d1x57a1



not modelled 99.2 25
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:EDF1-like
38c3f6wE_



not modelled 99.2 21
PDB header:dna binding protein
Chain: E: PDB Molecule:xre-family like protein;
PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000
39d1b0na2



not modelled 99.2 19
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
40c5uk3J_



not modelled 99.2 20
PDB header:lyase
Chain: J: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of cyanase from t. urticae
41d1lmb3_



not modelled 99.2 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
42d1llib_



not modelled 99.2 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
43c2o38A_



not modelled 99.2 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: putative xre family transcriptional regulator
44d2o38a1



not modelled 99.2 16
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE1354
45c2jvlA_



not modelled 99.2 21
PDB header:transcription
Chain: A: PDB Molecule:trmbf1;
PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei
46d1r69a_



not modelled 99.2 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
47c5d4zF_



not modelled 99.2 18
PDB header:dna binding protein
Chain: F: PDB Molecule:repressor;
PDBTitle: crystal structure of repressor from salmonella-temperate phage
48c3kxaD_



not modelled 99.1 19
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of ngo0477 from neisseria gonorrhoeae
49d1sq8a_



not modelled 99.1 18
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
50c3b7hA_



not modelled 99.1 28
PDB header:structural protein
Chain: A: PDB Molecule:prophage lp1 protein 11;
PDBTitle: crystal structure of the prophage lp1 protein 11
51d2croa_



not modelled 99.1 18
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
52c5jubA_



not modelled 99.1 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of comr from s.thermophilus in complex with dna and2 its signalling peptide coms.
53c2ef8A_



not modelled 99.1 21
PDB header:transcription regulator
Chain: A: PDB Molecule:putative transcription factor;
PDBTitle: crystal structure of c.ecot38is
54d2ofya1



not modelled 99.1 23
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
55c4rykA_



not modelled 99.1 21
PDB header:dna binding protein
Chain: A: PDB Molecule:lmo0325 protein;
PDBTitle: crystal structure of a putative transcriptional regulator from2 listeria monocytogenes egd-e
56c5fd4B_



not modelled 99.1 14
PDB header:transcription regulator
Chain: B: PDB Molecule:comr;
PDBTitle: crystal structure of comr from streptococcus suis
57c3eusB_



not modelled 99.1 28
PDB header:dna binding protein
Chain: B: PDB Molecule:dna-binding protein;
PDBTitle: the crystal structure of the dna binding protein from silicibacter2 pomeroyi
58c2xcjB_



not modelled 99.1 15
PDB header:viral protein
Chain: B: PDB Molecule:c protein;
PDBTitle: crystal structure of p2 c, the immunity repressor of2 temperate e. coli phage p2
59c3t76A_



not modelled 99.1 10
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator vanug;
PDBTitle: crystal structure of transcriptional regulator vanug, form ii
60c5j9iH_



not modelled 99.1 18
PDB header:antitoxin
Chain: H: PDB Molecule:antitoxin iga-2;
PDBTitle: crystal structure of the higa2 antitoxin c-terminal domain
61c3dnvB_



not modelled 99.0 19
PDB header:transcription/dna
Chain: B: PDB Molecule:hth-type transcriptional regulator hipb;
PDBTitle: mdt protein
62c3qyxD_



not modelled 99.0 18
PDB header:transcription/dna
Chain: D: PDB Molecule:esx-1 secretion-associated regulator espr;
PDBTitle: crystal structure of mycobacterium tuberculosis espr in complex with a2 small dna fragment
63c4yv9C_



not modelled 99.0 18
PDB header:dna binding protein/inhibitor
Chain: C: PDB Molecule:transcriptional regulator;
PDBTitle: x-ray crystal structure of streptococcus dysgalactiae shp pheromone2 receptor rgg2
64c3bdnB_



not modelled 99.0 21
PDB header:transcription/dna
Chain: B: PDB Molecule:lambda repressor;
PDBTitle: crystal structure of the lambda repressor
65c4pu4C_



not modelled 99.0 23
PDB header:toxin/antitoxin/dna
Chain: C: PDB Molecule:toxin-antitoxin system antidote transcriptional repressor
PDBTitle: shewanella oneidensis mr-1 toxin antitoxin system hipa, hipb and its2 operator dna complex (space group p21)
66c5d50I_



not modelled 99.0 15
PDB header:dna binding protein
Chain: I: PDB Molecule:repressor;
PDBTitle: crystal structure of rep-ant complex from salmonella-temperate phage
67c2fjrB_



not modelled 99.0 12
PDB header:transcription regulator
Chain: B: PDB Molecule:repressor protein ci;
PDBTitle: crystal structure of bacteriophage 186
68c3fmyA_



not modelled 99.0 17
PDB header:dna binding protein
Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa
PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021)
69d2a6ca1



not modelled 99.0 22
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE1354
70c4ghjA_



not modelled 99.0 19
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: 1.75 angstrom crystal structure of transcriptional regulator ftom2 vibrio vulnificus.
71c2grmB_



not modelled 98.9 11
PDB header:transcription
Chain: B: PDB Molecule:prgx;
PDBTitle: crystal structure of prgx/icf10 complex
72c5jaaB_



not modelled 98.9 18
PDB header:toxin
Chain: B: PDB Molecule:antitoxin iga-2;
PDBTitle: crystal structure of the higba2 toxin-antitoxin complex
73c3fymA_



not modelled 98.9 18
PDB header:dna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus
74c2axzC_



not modelled 98.9 14
PDB header:transcription
Chain: C: PDB Molecule:prgx;
PDBTitle: crystal structure of prgx/ccf10 complex
75c3pxpA_



not modelled 98.9 16
PDB header:transcription regulator
Chain: A: PDB Molecule:helix-turn-helix domain protein;
PDBTitle: crystal structure of a pas and dna binding domain containing protein2 (caur_2278) from chloroflexus aurantiacus j-10-fl at 2.30 a3 resolution
76c2wusR_



not modelled 98.8 17
PDB header:structural protein
Chain: R: PDB Molecule:putative uncharacterized protein;
PDBTitle: bacterial actin mreb assembles in complex with cell shape protein rodz
77c2ppxA_



not modelled 98.8 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atu1735;
PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens
78d2ppxa1



not modelled 98.8 14
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
79c2qfcB_



not modelled 98.8 23
PDB header:transcription regulation
Chain: B: PDB Molecule:plcr protein;
PDBTitle: crystal structure of bacillus thuringiensis plcr complexed with papr
80c4gqmA_



not modelled 98.7 21
PDB header:unknown function
Chain: A: PDB Molecule:ct009;
PDBTitle: crystal structure of a helix-turn-helix containing hypothetical2 protein (ct009) from chlamydia trachomatis in a sub-domain swap3 conformation
81c3gn5B_



not modelled 98.6 17
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
82c6fkgC_



not modelled 98.4 26
PDB header:toxin
Chain: C: PDB Molecule:rv1990c (mbca);
PDBTitle: crystal structure of the m.tuberculosis mbct-mbca toxin-antitoxin2 complex.
83c3r1fO_



not modelled 97.8 17
PDB header:transcription
Chain: O: PDB Molecule:esx-1 secretion-associated regulator espr;
PDBTitle: crystal structure of a key regulator of virulence in mycobacterium2 tuberculosis
84c2mqkA_



not modelled 97.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent target dna activator b;
PDBTitle: solution structure of n terminal domain of the mub aaa+ atpase
85d1nera_



not modelled 97.2 12
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
86c3bd1B_



not modelled 97.2 15
PDB header:transcription
Chain: B: PDB Molecule:cro protein;
PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1
87d1dwka1



not modelled 97.1 15
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Cyanase N-terminal domain
88d2bnma1



not modelled 96.8 35
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
89c2iv1J_



not modelled 96.8 15
PDB header:lyase
Chain: J: PDB Molecule:cyanate hydratase;
PDBTitle: site directed mutagenesis of key residues involved in the catalytic2 mechanism of cyanase
90c3c37B_



not modelled 96.7 17
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase, m48 family;
PDBTitle: x-ray structure of the putative zn-dependent peptidase q74d82 at the2 resolution 1.7 a. northeast structural genomics consortium target3 gsr143a
91c2auwB_



not modelled 96.2 14
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein ne0471;
PDBTitle: crystal structure of putative dna binding protein ne0471 from2 nitrosomonas europaea atcc 19718
92c1y791_



not modelled 96.2 12
PDB header:hydrolase
Chain: 1: PDB Molecule:peptidyl-dipeptidase dcp;
PDBTitle: crystal structure of the e.coli dipeptidyl carboxypeptidase2 dcp in complex with a peptidic inhibitor
93c3sksA_



not modelled 96.2 14
PDB header:hydrolase
Chain: A: PDB Molecule:putative oligoendopeptidase f;
PDBTitle: crystal structure of a putative oligoendopeptidase f from bacillus2 anthracis str. ames
94c5l43B_



not modelled 95.9 10
PDB header:hydrolase
Chain: B: PDB Molecule:k-26 dipeptidyl carboxypeptidase;
PDBTitle: structure of k26-dcp
95c5u57B_



not modelled 95.9 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:(s)-2-hydroxypropylphosphonic acid epoxidase;
PDBTitle: psf4 in complex with fe2+ and (s)-2-hpp
96c4ka8A_



not modelled 95.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:oligopeptidase a;
PDBTitle: structure of organellar oligopeptidase
97c2h1jA_



not modelled 95.6 11
PDB header:hydrolase
Chain: A: PDB Molecule:oligoendopeptidase f;
PDBTitle: 3.1 a x-ray structure of putative oligoendopeptidase f: crystals grown2 by microfluidic seeding
98d1lcda_



not modelled 95.5 13
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
99c4il3B_



not modelled 95.3 19
PDB header:hydrolase
Chain: B: PDB Molecule:ste24p;
PDBTitle: crystal structure of s. mikatae ste24p
100d2hsga1



not modelled 95.3 18
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
101c2c6nA_



not modelled 95.1 16
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:angiotensin-converting enzyme, somatic isoform;
PDBTitle: structure of human somatic angiontensin-i converting enzyme n domain2 with lisinopril
102d1s4bp_



not modelled 94.9 13
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Neurolysin-like
103d2bjca1



not modelled 94.9 12
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
104d1ic8a2



not modelled 94.8 5
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:POU-specific domain
105c3ce2A_



not modelled 94.8 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative peptidase;
PDBTitle: crystal structure of putative peptidase from chlamydophila abortus
106d1i1ip_



not modelled 94.7 17
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Neurolysin-like
107d1efaa1



not modelled 94.5 12
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
108d2ajfa1



not modelled 94.5 11
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Neurolysin-like
109c2k9qB_



not modelled 94.4 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of hth_xre family transcriptional2 regulator bt_p548217 from bacteroides thetaiotaomicron.3 northeast structural genomics consortium target btr244.
110d1qpza1



not modelled 94.3 8
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
111c6aitD_



not modelled 94.3 16
PDB header:hydrolase
Chain: D: PDB Molecule:beta-barrel assembly-enhancing protease;
PDBTitle: crystal structure of e. coli bepa
112c2lcvA_



not modelled 94.3 14
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional repressor cytr;
PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation
113c1efaA_



not modelled 94.2 13
PDB header:transcription/dna
Chain: A: PDB Molecule:lac repressor;
PDBTitle: crystal structure of the lac repressor dimer bound to operator and the2 anti-inducer onpf
114c5j2yA_



not modelled 94.1 17
PDB header:gene regulation/dna
Chain: A: PDB Molecule:regulatory protein;
PDBTitle: molecular insight into the regulatory mechanism of the quorum-sensing2 repressor rsal in pseudomonas aeruginosa
115c2l8nA_



not modelled 94.1 13
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional repressor cytr;
PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
116d1uxda_



not modelled 94.1 13
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
117c3cqbB_



not modelled 93.9 11
PDB header:hydrolase
Chain: B: PDB Molecule:probable protease htpx homolog;
PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633
118c4go1A_



not modelled 93.9 30
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lsrr;
PDBTitle: crystal structure of full length transcription repressor lsrr from e.2 coli.
119d1uxca_



not modelled 93.8 16
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
120d2auwa1



not modelled 93.7 15
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE0471 C-terminal domain-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite