Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2527_(-)_2851325_2851726
DateWed Aug 7 12:50:16 BST 2019
Unique Job ID94ed09c53cfcd661
SequenceMTTWILDKSA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.132 Y:35.161 Z:44.867
Model (left) based on template c3h87B_
Top template information
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis
Confidence and coverage
Confidence: 99.9% Coverage: 98%
130 residues ( 98% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3h87B_



99.9 30
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis
2c5sv2A_



99.9 29
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease vapc21;
PDBTitle: toxin vapc21 from mycobacterium tuberculosis
3c4chgC_



99.9 18
PDB header:toxin/antitoxin
Chain: C: PDB Molecule:probable ribonuclease vapc15;
PDBTitle: crystal structure of vapbc15 complex from mycobacterium tuberculosis
4c3tndC_



99.9 15
PDB header:translation, toxin
Chain: C: PDB Molecule:trna(fmet)-specific endonuclease vapc;
PDBTitle: crystal structure of shigella flexneri vapbc toxin-antitoxin complex
5d1v96a1



99.8 13
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
6c6nklA_



99.8 18
PDB header:antitoxin
Chain: A: PDB Molecule:ribonuclease vapc;
PDBTitle: 2.2 a resolution structure of vapbc-1 from nontypeable haemophilus2 influenzae
7c3dboB_



99.8 21
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a member of the vapbc family of toxin-antitoxin2 systems, vapbc-5, from mycobacterium tuberculosis
8c3zvkC_



99.8 16
PDB header:antitoxin/toxin/dna
Chain: C: PDB Molecule:toxin of toxin-antitoxin system;
PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter
9c6a7vG_



99.8 23
PDB header:toxin/antitoxin
Chain: G: PDB Molecule:ribonuclease vapc11;
PDBTitle: crystal structure of mycobacterium tuberculosis vapbc11 toxin-2 antitoxin complex
10c5l6mC_



99.8 19
PDB header:hydrolase
Chain: C: PDB Molecule:ribonuclease vapc;
PDBTitle: structure of caulobacter crescentus vapbc1 (vapb1deltac:vapc1 form)
11d1y82a1



99.8 14
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
12d2h1ca1



99.8 16
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
13c4xgrG_



99.7 15
PDB header:toxin/antitoxin
Chain: G: PDB Molecule:ribonuclease vapc30;
PDBTitle: crystal structure of addiction module from mycobacterial species
14c5x3tD_



99.4 18
PDB header:antitoxin/toxin
Chain: D: PDB Molecule:ribonuclease vapc26;
PDBTitle: vapbc from mycobacterium tuberculosis
15c5wzfB_



99.4 11
PDB header:hydrolase
Chain: B: PDB Molecule:23s rrna-specific endonuclease vapc20;
PDBTitle: crystal structure of mycobacterium tuberculosis vapc20 (rv2549c),2 sarcin-ricin loop cleaving toxin
16c2fe1A_



99.3 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein pae0151;
PDBTitle: crystal structure of pae0151 from pyrobaculum aerophilum
17d2fe1a1



99.3 13
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
18c3ix7A_



98.2 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ttha0540;
PDBTitle: crystal structure of a domain of functionally unknown protein from2 thermus thermophilus hb8
19d1v8pa_



98.2 16
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
20d1o4wa_



98.2 14
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
21c1v8pK_



not modelled 98.1 16
PDB header:structural genomics, unknown function
Chain: K: PDB Molecule:hypothetical protein pae2754;
PDBTitle: crystal structure of pae2754 from pyrobaculum aerophilum
22c3i8oA_



not modelled 97.9 9
PDB header:rna binding protein
Chain: A: PDB Molecule:kh domain-containing protein mj1533;
PDBTitle: a domain of a functionally unknown protein from methanocaldococcus2 jannaschii dsm 2661.
23c5ywwA_



not modelled 97.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
24d1w8ia_



not modelled 97.6 9
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
25c5f4hF_



not modelled 97.5 17
PDB header:hydrolase
Chain: F: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
26c2lcqA_



not modelled 97.1 17
PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
27c2hwwC_



not modelled 94.9 20
PDB header:rna binding protein
Chain: C: PDB Molecule:telomerase-binding protein est1a;
PDBTitle: structure of pin domain of human smg6
28c5yz4A_



not modelled 93.1 14
PDB header:hydrolase
Chain: A: PDB Molecule:rrna-processing protein fcf1;
PDBTitle: structure of the pin domain endonuclease utp24
29c5jpqd_



not modelled 93.0 20
PDB header:ribosome
Chain: D: PDB Molecule:wd40 domain proteins;
PDBTitle: cryo-em structure of the 90s pre-ribosome
30c2hwyB_



not modelled 84.1 9
PDB header:rna binding protein
Chain: B: PDB Molecule:protein smg5;
PDBTitle: structure of pin domain of human smg5.
31c3v32B_



not modelled 72.6 36
PDB header:hydrolase
Chain: B: PDB Molecule:ribonuclease zc3h12a;
PDBTitle: crystal structure of mcpip1 n-terminal conserved domain
32c3v33A_



not modelled 70.1 36
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease zc3h12a;
PDBTitle: crystal structure of mcpip1 conserved domain with zinc-finger motif
33c4mj7B_



not modelled 65.2 17
PDB header:rna binding protein
Chain: B: PDB Molecule:rrna-processing protein utp23;
PDBTitle: crystal structure of the pin domain of saccharomyces cerevisiae utp23
34c6g5iy_



not modelled 63.4 12
PDB header:ribosome
Chain: Y: PDB Molecule:40s ribosomal protein s24;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state r
35d1cmwa2



not modelled 57.9 26
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
36c3zddA_



not modelled 52.1 23
PDB header:hydrolase/dna
Chain: A: PDB Molecule:protein xni;
PDBTitle: structure of e. coli exoix in complex with the palindromic 5ov62 oligonucleotide and potassium
37c2qipA_



not modelled 21.9 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function vpa0982;
PDBTitle: crystal structure of a protein of unknown function vpa0982 from vibrio2 parahaemolyticus rimd 2210633
38c1ut8B_



not modelled 21.8 22
PDB header:hydrolase
Chain: B: PDB Molecule:exodeoxyribonuclease;
PDBTitle: divalent metal ions (zinc) bound to t5 5'-exonuclease
39d1tfra2



not modelled 17.7 19
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
40c1cmwA_



not modelled 17.2 26
PDB header:transferase
Chain: A: PDB Molecule:protein (dna polymerase i);
PDBTitle: crystal structure of taq dna-polymerase shows a new orientation for2 the structure-specific nuclease domain
41d1xo1a2



not modelled 15.5 19
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
42c2ihnA_



not modelled 14.8 22
PDB header:hydrolase/dna
Chain: A: PDB Molecule:ribonuclease h;
PDBTitle: co-crystal of bacteriophage t4 rnase h with a fork dna2 substrate
43d1a77a2



not modelled 10.7 17
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
44c4qtkB_



not modelled 10.2 8
PDB header:transcription/dna
Chain: B: PDB Molecule:white-opaque regulator 1;
PDBTitle: complex of wopr domain of wor1 in candida albicans with the 17bp dsdna
45c3q8lA_



not modelled 8.7 13
PDB header:hydrolase/dna
Chain: A: PDB Molecule:flap endonuclease 1;
PDBTitle: crystal structure of human flap endonuclease fen1 (wt) in complex with2 substrate 5'-flap dna, sm3+, and k+
46c2iswB_



not modelled 8.7 22
PDB header:lyase
Chain: B: PDB Molecule:putative fructose-1,6-bisphosphate aldolase;
PDBTitle: structure of giardia fructose-1,6-biphosphate aldolase in2 complex with phosphoglycolohydroxamate
47d1ul1x2



not modelled 8.4 13
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
48c1zp0D_



not modelled 8.3 13
PDB header:oxidoreductase
Chain: D: PDB Molecule:small cytochrome binding protein;
PDBTitle: crystal structure of mitochondrial respiratory complex ii2 bound with 3-nitropropionate and 2-thenoyltrifluoroacetone
49c2murA_



not modelled 8.0 10
PDB header:protein binding
Chain: A: PDB Molecule:fanconi anemia-associated protein of 20 kda;
PDBTitle: solution structure of the human faap20 ubz-ubiquitin complex
50c2muqA_



not modelled 8.0 10
PDB header:ubiquitin binding protein
Chain: A: PDB Molecule:fanconi anemia-associated protein of 20 kda;
PDBTitle: solution structure of the human faap20 ubz
51c2n22B_



not modelled 7.9 38
PDB header:transcription
Chain: B: PDB Molecule:transcription factor p65;
PDBTitle: nmr structure of the complex between the ph domain of the tfb1 subunit2 from tfiih and the transactivation domain of p65
52c3wmqA_



not modelled 7.0 8
PDB header:sugar binding protein
Chain: A: PDB Molecule:galactose-binding lectin;
PDBTitle: crystal structure of the complex between sll-2 and galnac.
53c4m8bR_



not modelled 6.5 16
PDB header:transcription/dna
Chain: R: PDB Molecule:yhr177w;
PDBTitle: fungal protein
54c2lhuA_



not modelled 6.0 33
PDB header:structural protein
Chain: A: PDB Molecule:mybpc3 protein;
PDBTitle: structural insight into the unique cardiac myosin binding protein-c2 motif: a partially folded domain
55c5urnB_



not modelled 6.0 38
PDB header:transcription
Chain: B: PDB Molecule:transcription factor p65;
PDBTitle: nmr structure of the complex between the ph domain of the tfb1 subunit2 from tfiih and the transactivation domain 1 of p65
56d1q0qa2



not modelled 6.0 20
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
57c2izoA_



not modelled 5.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:flap structure-specific endonuclease;
PDBTitle: structure of an archaeal pcna1-pcna2-fen1 complex
58c4mitG_



not modelled 5.7 25
PDB header:signaling protein
Chain: G: PDB Molecule:serine/threonine protein kinase pak, putative;
PDBTitle: crystal structure of e. histolytica racc bound to the ehpak4 pbd
59c5v76A_



not modelled 5.3 36
PDB header:structural protein
Chain: A: PDB Molecule:microcompartments protein;
PDBTitle: structure of haliangium ochraceum bmc-t ho-3341

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