Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2532c_(-)_2857863_2858264
DateWed Aug 7 12:50:16 BST 2019
Unique Job ID3f6ca0c82c5ff5cb
SequenceMTRLELRVVV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.450 Y:33.484 Z:37.705
Model (left) based on template c2w0cT_
Top template information
PDB header:virus
Chain: T: PDB Molecule:protein p6;
PDBTitle: x-ray structure of the entire lipid-containing bacteriophage pm2
Confidence and coverage
Confidence: 40.5% Coverage: 22%
29 residues ( 22% of your sequence) have been modelled with 40.5% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2w0cT_



40.5 45
PDB header:virus
Chain: T: PDB Molecule:protein p6;
PDBTitle: x-ray structure of the entire lipid-containing bacteriophage pm2
2d1pyla_



13.9 27
Fold:Microbial ribonucleases
Superfamily:Microbial ribonucleases
Family:Bacterial ribonucleases
3c6dnmA_



13.4 22
PDB header:chaperone
Chain: A: PDB Molecule:export chaperone sats;
PDBTitle: the crystal structure of sats c-terminal domain
4d1v8ha1



11.7 20
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:SoxZ-like
5c2kq5A_



10.6 44
PDB header:unknown function
Chain: A: PDB Molecule:avirulence protein;
PDBTitle: solution nmr structure of a section of the repeat domain of the type2 iii effector protein ptha
6c2n2aA_



10.4 29
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: spatial structure of her2/erbb2 dimeric transmembrane domain in the2 presence of cytoplasmic juxtamembrane domains
7c1zgxB_



8.7 40
PDB header:hydrolase
Chain: B: PDB Molecule:guanyl-specific ribonuclease sa;
PDBTitle: crystal structure of ribonuclease mutant
8c3h3pT_



8.2 45
PDB header:immune system
Chain: T: PDB Molecule:4e10_s0_1tjlc_004_n;
PDBTitle: crystal structure of hiv epitope-scaffold 4e10 fv complex
9d1s9ca2



8.1 54
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:MaoC-like
10d1gyca3



7.8 43
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
11d1kyaa3



7.6 43
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
12c3d0fA_



7.4 38
PDB header:transferase
Chain: A: PDB Molecule:penicillin-binding 1 transmembrane protein mrca;
PDBTitle: structure of the big_1156.2 domain of putative penicillin-binding2 protein mrca from nitrosomonas europaea atcc 19718
13d1v10a3



7.3 43
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
14d1hfua3



6.5 43
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
15d2idba1



6.3 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:UbiD middle domain-like
16d1mgra_



6.3 33
Fold:Microbial ribonucleases
Superfamily:Microbial ribonucleases
Family:Bacterial ribonucleases
17d1uyra1



6.2 44
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
18c2yxwB_



6.1 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:blue copper oxidase cueo;
PDBTitle: the deletion mutant of multicopper oxidase cueo
19c3zfnA_



6.1 45
PDB header:hydrolase
Chain: A: PDB Molecule:n-terminal protease npro;
PDBTitle: crystal structure of product-like, processed n-terminal protease npro
20d1pn2a1



6.1 23
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:MaoC-like
21d2q9oa3



not modelled 6.0 71
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
22c3gliP_



not modelled 5.9 36
PDB header:transferase/dna
Chain: P: PDB Molecule:dna polymerase iii subunit psi;
PDBTitle: crystal structure of the e. coli clamp loader bound to primer-template2 dna and psi peptide
23d1pj5a3



not modelled 5.4 50
Fold:FAD-linked reductases, C-terminal domain
Superfamily:FAD-linked reductases, C-terminal domain
Family:L-aminoacid/polyamine oxidase
24d1ku7a_



not modelled 5.4 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
25c6fhsH_



not modelled 5.2 50
PDB header:dna binding protein
Chain: H: PDB Molecule:les2;
PDBTitle: cryoem structure of ino80core
26c2uxtA_



not modelled 5.1 0
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein sufi;
PDBTitle: sufi protein from escherichia coli

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below