Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2555c_(alaS)_2873781_2876495
DateWed Aug 7 12:50:19 BST 2019
Unique Job ID8db8c08487052773
SequenceVQTHEIRKRF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:88.635 Y:107.911 Z:121.966
Model (left) based on template c3wqyB_
Top template information
PDB header:ligase/rna
Chain: B: PDB Molecule:alanine--trna ligase;
PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna synthetase in2 complex with wild-type trna(ala) having g3.u70
Confidence and coverage
Confidence:100.0% Coverage: 87%
784 residues ( 87% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
886 residues ( 98%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3wqyB_
100.0 28
PDB header:ligase/rna
Chain: B: PDB Molecule:alanine--trna ligase;
PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna synthetase in2 complex with wild-type trna(ala) having g3.u70
2c2zzfA_
100.0 32
PDB header:ligase
Chain: A: PDB Molecule:alanyl-trna synthetase;
PDBTitle: crystal structure of alanyl-trna synthetase without oligomerization2 domain
3c2ztgA_
100.0 29
PDB header:ligase
Chain: A: PDB Molecule:alanyl-trna synthetase;
PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase lacking the c-terminal dimerization domain in3 complex with ala-sa
4c1yfsB_
100.0 48
PDB header:ligase
Chain: B: PDB Molecule:alanyl-trna synthetase;
PDBTitle: the crystal structure of alanyl-trna synthetase in complex2 with l-alanine
5c3hxxA_
100.0 47
PDB header:ligase
Chain: A: PDB Molecule:alanyl-trna synthetase;
PDBTitle: crystal structure of catalytic fragment of e. coli alars in complex2 with amppcp
6c5knnG_
100.0 43
PDB header:ligase
Chain: G: PDB Molecule:alanine--trna ligase, cytoplasmic;
PDBTitle: evolutionary gain of alanine mischarging to non-cognate trnas with a2 g4:u69 base pair
7c4xeoB_
100.0 44
PDB header:ligase
Chain: B: PDB Molecule:alanine--trna ligase, cytoplasmic;
PDBTitle: crystal structure of human alars catalytic domain with r329h mutation
8d1riqa2
100.0 55
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
9d1j5wa_
100.0 22
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
10c5f5wC_
100.0 22
PDB header:ligase
Chain: C: PDB Molecule:glycine--trna ligase alpha subunit;
PDBTitle: crystal structure of the alpha subunit of glycyl trna synthetase2 (glyrs) from aquifex aeolicus in complex with an analog of glycyl3 adenylate (gly-sa)
11c3rf1B_
100.0 21
PDB header:ligase
Chain: B: PDB Molecule:glycyl-trna synthetase alpha subunit;
PDBTitle: the crystal structure of glycyl-trna synthetase subunit alpha from2 campylobacter jejuni subsp. jejuni nctc 11168
12d1riqa1
100.0 38
Fold:Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Superfamily:Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Family:Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
13c3kewA_
100.0 21
PDB header:transferase
Chain: A: PDB Molecule:dhha1 domain protein;
PDBTitle: crystal structure of probable alanyl-trna-synthase from clostridium2 perfringens
14c2e1bA_
100.0 31
PDB header:ligase, hydrolase
Chain: A: PDB Molecule:216aa long hypothetical alanyl-trna synthetase;
PDBTitle: crystal structure of the alax-m trans-editing enzyme from2 pyrococcus horikoshii
15d2e1ba2
100.0 30
Fold:RRF/tRNA synthetase additional domain-like
Superfamily:ThrRS/AlaRS common domain
Family:AlaX-like
16d1v4pa_
100.0 21
Fold:RRF/tRNA synthetase additional domain-like
Superfamily:ThrRS/AlaRS common domain
Family:AlaX-like
17d1nyra3
99.9 19
Fold:RRF/tRNA synthetase additional domain-like
Superfamily:ThrRS/AlaRS common domain
Family:Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
18c2zvfG_
99.9 21
PDB header:ligase
Chain: G: PDB Molecule:alanyl-trna synthetase;
PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase c-terminal dimerization domain
19c5t76A_
99.9 22
PDB header:translation
Chain: A: PDB Molecule:alanine--trna ligase, cytoplasmic;
PDBTitle: a fragment of a human trna synthetase
20d1tkea2
99.9 17
Fold:RRF/tRNA synthetase additional domain-like
Superfamily:ThrRS/AlaRS common domain
Family:Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
21c1nyqA_
not modelled 99.9 16
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase 1;
PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate
22c1tkeA_
not modelled 99.9 14
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase;
PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase complexed with serine
23c1qf6A_
not modelled 99.9 17
PDB header:ligase/rna
Chain: A: PDB Molecule:threonyl-trna synthetase;
PDBTitle: structure of e. coli threonyl-trna synthetase complexed with its2 cognate trna
24c4v1ac_
not modelled 99.8 14
PDB header:ribosome
Chain: C: PDB Molecule:
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 22 of 2
25c3g98B_
not modelled 99.7 22
PDB header:ligase
Chain: B: PDB Molecule:alanyl-trna synthetase;
PDBTitle: crystal structure of the c-ala domain from aquifex aeolicus2 alanyl-trna synthetase
26d2e1ba1
not modelled 99.6 31
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:AlaX-M N-terminal domain-like
27c4ce4c_
not modelled 99.4 11
PDB header:ribosome
Chain: C: PDB Molecule:
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
28c5ghrA_
not modelled 96.9 18
PDB header:dna binding protein/replication
Chain: A: PDB Molecule:ssdna-specific exonuclease;
PDBTitle: dna replication protein
29c6ezdD_
not modelled 93.1 19
PDB header:ligase
Chain: D: PDB Molecule:pyrrolysyl-trna synthetase;
PDBTitle: pyrrolysyl-trna synthetase from canditatus methanomethylophilus alvus2 (mmapylrs)
30c5hgqD_
not modelled 92.7 18
PDB header:ligase/ligase inhibitor
Chain: D: PDB Molecule:lysine--trna ligase;
PDBTitle: loa loa lysyl-trna synthetase in complex with cladosporin.
31c4h02B_
not modelled 92.1 19
PDB header:ligase
Chain: B: PDB Molecule:lysyl-trna synthetase;
PDBTitle: crystal structure of p. falciparum lysyl-trna synthetase
32c2odrD_
not modelled 89.6 19
PDB header:ligase
Chain: D: PDB Molecule:phosphoseryl-trna synthetase;
PDBTitle: methanococcus maripaludis phosphoseryl-trna synthetase
33c2odrC_
not modelled 87.7 18
PDB header:ligase
Chain: C: PDB Molecule:phosphoseryl-trna synthetase;
PDBTitle: methanococcus maripaludis phosphoseryl-trna synthetase
34c1b70A_
not modelled 86.8 22
PDB header:ligase
Chain: A: PDB Molecule:phenylalanyl-trna synthetase;
PDBTitle: phenylalanyl trna synthetase complexed with phenylalanine
35c2znjB_
not modelled 84.7 16
PDB header:ligase
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of pyrrolysyl-trna synthetase from2 desulfitobacterium hafniense
36d1kmma2
not modelled 84.5 17
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
37d1jjca_
not modelled 84.4 22
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
38c1z7nB_
not modelled 82.7 17
PDB header:transferase
Chain: B: PDB Molecule:atp phosphoribosyltransferase regulatory subunit;
PDBTitle: atp phosphoribosyl transferase (hiszg atp-prtase) from2 lactococcus lactis with bound prpp substrate
39c3l4gC_
not modelled 82.1 23
PDB header:ligase
Chain: C: PDB Molecule:phenylalanyl-trna synthetase alpha chain;
PDBTitle: crystal structure of homo sapiens cytoplasmic phenylalanyl-trna2 synthetase
40d1h4vb2
not modelled 82.0 16
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
41c2odrB_
not modelled 81.1 20
PDB header:ligase
Chain: B: PDB Molecule:phosphoseryl-trna synthetase;
PDBTitle: methanococcus maripaludis phosphoseryl-trna synthetase
42d1ir6a_
not modelled 77.9 16
Fold:DHH phosphoesterases
Superfamily:DHH phosphoesterases
Family:Exonuclease RecJ
43c1ir6A_
not modelled 77.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:exonuclease recj;
PDBTitle: crystal structure of exonuclease recj bound to manganese
44d1qjta_
not modelled 76.7 14
Fold:EF Hand-like
Superfamily:EF-hand
Family:Eps15 homology domain (EH domain)
45c4lnsA_
not modelled 76.2 17
PDB header:ligase
Chain: A: PDB Molecule:asparagine synthetase a;
PDBTitle: crystal structure of asparagine synthetase a (asna) from trypanosoma2 brucei
46c3t5sA_
not modelled 76.1 18
PDB header:immune system
Chain: A: PDB Molecule:macrophage migration inhibitory factor;
PDBTitle: structure of macrophage migration inhibitory factor from giardia2 lamblia
47c1e22A_
not modelled 75.4 23
PDB header:ligase
Chain: A: PDB Molecule:lysyl-trna synthetase;
PDBTitle: lysyl-trna synthetase (lysu) hexagonal form complexed with2 lysine and the non-hydrolysable atp analogue amp-pcp
48d1eova2
not modelled 74.9 27
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
49d1c0aa3
not modelled 74.7 16
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
50c3l4gI_
not modelled 73.6 25
PDB header:ligase
Chain: I: PDB Molecule:phenylalanyl-trna synthetase alpha chain;
PDBTitle: crystal structure of homo sapiens cytoplasmic phenylalanyl-trna2 synthetase
51d1l0wa3
not modelled 73.4 13
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
52c5xspB_
not modelled 72.4 8
PDB header:hydrolase
Chain: B: PDB Molecule:phosphodiesterase acting on cyclic dinucleotides;
PDBTitle: the catalytic domain of gdpp with 5'-papa
53c2xczA_
not modelled 71.9 21
PDB header:immune system
Chain: A: PDB Molecule:possible atls1-like light-inducible protein;
PDBTitle: crystal structure of macrophage migration inhibitory factor homologue2 from prochlorococcus marinus
54d1hfoa_
not modelled 71.8 18
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
55c3g1zB_
not modelled 71.3 11
PDB header:ligase
Chain: B: PDB Molecule:putative lysyl-trna synthetase;
PDBTitle: structure of idp01693/yjea, a potential t-rna synthetase from2 salmonella typhimurium
56c5o1uB_
not modelled 71.2 16
PDB header:hydrolase
Chain: B: PDB Molecule:phosphodiesterase;
PDBTitle: structure of wildtype t.maritima pde (tm1595) with amp and mn2+
57c5t59D_
not modelled 71.2 13
PDB header:cell cycle
Chain: D: PDB Molecule:klla0f02343p;
PDBTitle: structure of the mind complex shows a regulatory focus of yeast2 kinetochore assembly
58d1dpta_
not modelled 71.0 25
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
59d1zunb1
not modelled 70.6 17
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
60c3b64A_
not modelled 70.5 17
PDB header:cytokine
Chain: A: PDB Molecule:macrophage migration inhibitory factor-like
PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major
61c5j21C_
not modelled 70.4 20
PDB header:hydrolase
Chain: C: PDB Molecule:bifunctional oligoribonuclease and pap phosphatase nrna;
PDBTitle: structure of bacillus nanornase a (wt)
62c3fwtA_
not modelled 70.3 25
PDB header:cytokine
Chain: A: PDB Molecule:macrophage migration inhibitory factor-like
PDBTitle: crystal structure of leishmania major mif2
63c1efwA_
not modelled 70.0 13
PDB header:ligase/rna
Chain: A: PDB Molecule:aspartyl-trna synthetase;
PDBTitle: crystal structure of aspartyl-trna synthetase from thermus2 thermophilus complexed to trnaasp from escherichia coli
64c2du7C_
not modelled 69.7 23
PDB header:ligase
Chain: C: PDB Molecule:o-phosphoseryl-trna synthetase;
PDBTitle: crystal structure of methanococcus jannacshii o-phosphoseryl-trna2 synthetase
65c3pcoC_
not modelled 69.6 41
PDB header:ligase
Chain: C: PDB Molecule:phenylalanyl-trna synthetase, alpha subunit;
PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp
66c6pqhA_
not modelled 69.3 20
PDB header:ligase
Chain: A: PDB Molecule:asparagine--trna ligase;
PDBTitle: crystal structure of asparagine-trna ligase from elizabethkingia sp.2 ccug 26117
67d1uiza_
not modelled 68.9 21
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
68c2os5C_
not modelled 68.3 11
PDB header:cytokine
Chain: C: PDB Molecule:acemif;
PDBTitle: macrophage migration inhibitory factor from ancylostoma ceylanicum
69c5ejdK_
not modelled 67.7 31
PDB header:biosynthetic protein
Chain: K: PDB Molecule:tqaa;
PDBTitle: the crystal structure of holo t3ct
70c2rhqA_
not modelled 67.7 13
PDB header:ligase
Chain: A: PDB Molecule:phenylalanyl-trna synthetase alpha chain;
PDBTitle: phers from staphylococcus haemolyticus- rational protein engineering2 and inhibitor studies
71c1b8aB_
not modelled 67.5 30
PDB header:ligase
Chain: B: PDB Molecule:protein (aspartyl-trna synthetase);
PDBTitle: aspartyl-trna synthetase
72c3e9hB_
not modelled 67.4 23
PDB header:ligase
Chain: B: PDB Molecule:lysyl-trna synthetase;
PDBTitle: lysyl-trna synthetase from bacillus stearothermophilus2 complexed with l-lysylsulfamoyl adenosine
73d2gdga1
not modelled 66.2 29
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
74c2du4B_
not modelled 66.1 21
PDB header:ligase/rna
Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase;
PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys
75d1gd0a_
not modelled 65.9 29
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
76c5zg8A_
not modelled 65.8 21
PDB header:ligase
Chain: A: PDB Molecule:asparagine--trna ligase;
PDBTitle: crystal structure of ttnrs
77c4ah6B_
not modelled 65.7 7
PDB header:ligase
Chain: B: PDB Molecule:aspartate--trna ligase, mitochondrial;
PDBTitle: human mitochondrial aspartyl-trna synthetase
78c4wj4A_
not modelled 65.4 11
PDB header:ligase/rna
Chain: A: PDB Molecule:aspartate--trna(asp/asn) ligase;
PDBTitle: crystal structure of non-discriminating aspartyl-trna synthetase from2 pseudomonas aeruginosa complexed with trna(asn) and aspartic acid
79d1nnha_
not modelled 65.3 20
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
80c4o2dB_
not modelled 64.8 21
PDB header:ligase
Chain: B: PDB Molecule:aspartate--trna ligase;
PDBTitle: crystal structure of aspartyl-trna synthetase from mycobacterium2 smegmatis with bound aspartic acid
81c3gacD_
not modelled 64.7 21
PDB header:cytokine
Chain: D: PDB Molecule:macrophage migration inhibitory factor-like
PDBTitle: structure of mif with hpp
82c5xixD_
not modelled 64.3 18
PDB header:ligase
Chain: D: PDB Molecule:asparagine--trna ligase, cytoplasmic;
PDBTitle: the canonical domain of human asparaginyl-trna synthetase
83d1n9wa2
not modelled 64.2 21
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
84c1asyA_
not modelled 63.9 30
PDB header:complex (aminoacyl-trna synthase/trna)
Chain: A: PDB Molecule:aspartyl-trna synthetase;
PDBTitle: class ii aminoacyl transfer rna synthetases: crystal2 structure of yeast aspartyl-trna synthetase complexed with3 trna asp
85c3bjuB_
not modelled 63.4 36
PDB header:ligase
Chain: B: PDB Molecule:lysyl-trna synthetase;
PDBTitle: crystal structure of tetrameric form of human lysyl-trna synthetase
86d1b8aa2
not modelled 63.4 13
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
87c6ns0A_
not modelled 63.4 18
PDB header:ligase
Chain: A: PDB Molecule:lysine--trna ligase;
PDBTitle: crystal structure of lysyl-trna synthetase from chlamydia trachomatis2 complexed with l-lysine and cladosporin
88c1n9wA_
not modelled 63.0 21
PDB header:biosynthetic protein
Chain: A: PDB Molecule:aspartyl-trna synthetase 2;
PDBTitle: crystal structure of the non-discriminating and archaeal-2 type aspartyl-trna synthetase from thermus thermophilus
89c4x0oG_
not modelled 62.5 16
PDB header:transferase
Chain: G: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2;
PDBTitle: beta-ketoacyl-(acyl carrier protein) synthase iii-2 (fabh2) from2 vibrio cholerae soaked with acetyl-coa
90c1wydB_
not modelled 62.5 27
PDB header:ligase
Chain: B: PDB Molecule:hypothetical aspartyl-trna synthetase;
PDBTitle: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii
91c3i7fA_
not modelled 62.4 25
PDB header:ligase
Chain: A: PDB Molecule:aspartyl-trna synthetase;
PDBTitle: aspartyl trna synthetase from entamoeba histolytica
92c2du3A_
not modelled 61.9 23
PDB header:ligase/rna
Chain: A: PDB Molecule:o-phosphoseryl-trna synthetase;
PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys and o-phosphoserine
93c4upaA_
not modelled 61.9 36
PDB header:ligase
Chain: A: PDB Molecule:lysine--trna ligase;
PDBTitle: crystal structure of entamoeba histolytica lysyl-trna synthetase in2 complex with amppnp
94c1qe0B_
not modelled 61.8 17
PDB header:ligase
Chain: B: PDB Molecule:histidine--trna ligase;
PDBTitle: crystal structure of apo s. aureus histidyl-trna synthetase
95d1wu7a2
not modelled 61.8 17
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
96c4dh4A_
not modelled 61.4 24
PDB header:isomerase
Chain: A: PDB Molecule:mif;
PDBTitle: macrophage migration inhibitory factor toxoplasma gondii
97d1fima_
not modelled 61.4 29
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MIF-related
98c4j15A_
not modelled 61.3 29
PDB header:ligase
Chain: A: PDB Molecule:aspartate--trna ligase, cytoplasmic;
PDBTitle: crystal structure of human cytosolic aspartyl-trna synthetase, a2 component of multi-trna synthetase complex
99c2zimA_
not modelled 61.3 20
PDB header:ligase
Chain: A: PDB Molecule:pyrrolysyl-trna synthetase;
PDBTitle: pyrrolysyl-trna synthetase bound to adenylated pyrrolysine and2 pyrophosphate
100c1eqrC_
not modelled 61.2 14
PDB header:ligase
Chain: C: PDB Molecule:aspartyl-trna synthetase;
PDBTitle: crystal structure of free aspartyl-trna synthetase from2 escherichia coli
101c5elnC_
not modelled 60.8 29
PDB header:ligase
Chain: C: PDB Molecule:lysine--trna ligase;
PDBTitle: crystal structure of lysyl-trna synthetase from cryptosporidium parvum2 complexed with l-lysine
102d1qf6a4
not modelled 60.7 15
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
103c2di4B_
not modelled 60.6 13
PDB header:hydrolase
Chain: B: PDB Molecule:cell division protein ftsh homolog;
PDBTitle: crystal structure of the ftsh protease domain
104c2xgtB_
not modelled 60.5 21
PDB header:ligase
Chain: B: PDB Molecule:asparaginyl-trna synthetase, cytoplasmic;
PDBTitle: asparaginyl-trna synthetase from brugia malayi complexed2 with the sulphamoyl analogue of asparaginyl-adenylate
105c6cuqB_
not modelled 60.2 21
PDB header:cytokine
Chain: B: PDB Molecule:macrophage migration inhibitory factor-like protein;
PDBTitle: crystal structure of macrophage migration inhibitory factor-like2 protein (ehmif) from entamoeba histolytica
106d2di4a1
not modelled 60.1 13
Fold:FtsH protease domain-like
Superfamily:FtsH protease domain-like
Family:FtsH protease domain-like
107d1bbua2
not modelled 59.3 17
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
108c1eiyA_
not modelled 57.9 35
PDB header:ligase/rna
Chain: A: PDB Molecule:phenylalanyl-trna synthetase;
PDBTitle: the crystal structure of phenylalanyl-trna synthetase from thermus2 thermophilus complexed with cognate trnaphe
109c6od8A_
not modelled 57.7 25
PDB header:ligase
Chain: A: PDB Molecule:putative aspartyl-trna synthetase;
PDBTitle: crystal structure of a putative aspartyl-trna synthetase from2 leishmania major friedlin
110c4up8A_
not modelled 57.5 36
PDB header:ligase
Chain: A: PDB Molecule:lysine--trna ligase;
PDBTitle: crystal structure of entamoeba histolytica lysyl-trna synthetase apo2 form
111d1u6ea2
not modelled 57.5 15
Fold:Thiolase-like
Superfamily:Thiolase-like
Family:Chalcone synthase-like
112c1x55A_
not modelled 57.4 21
PDB header:ligase
Chain: A: PDB Molecule:asparaginyl-trna synthetase;
PDBTitle: crystal structure of asparaginyl-trna synthetase from pyrococcus2 horikoshii complexed with asparaginyl-adenylate analogue
113c4p74D_
not modelled 57.3 41
PDB header:ligase/ligase inhibitor
Chain: D: PDB Molecule:phenylalanine--trna ligase alpha subunit;
PDBTitle: phers in complex with compound 3a
114c4r3zA_
not modelled 57.1 19
PDB header:protein binding/ligase
Chain: A: PDB Molecule:aminoacyl trna synthase complex-interacting multifunctional
PDBTitle: crystal structure of human argrs-glnrs-aimp1 complex
115c3zeyG_
not modelled 57.0 15
PDB header:ribosome
Chain: G: PDB Molecule:40s ribosomal protein s13, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
116c3devB_
not modelled 56.8 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:sh1221;
PDBTitle: crystal structure of sh1221 protein from staphylococcus haemolyticus,2 northeast structural genomics consortium target shr87
117c4ex5A_
not modelled 55.8 21
PDB header:transferase
Chain: A: PDB Molecule:lysine--trna ligase;
PDBTitle: crystal structure of lysyl-trna synthetase lysrs from burkholderia2 thailandensis bound to lysine
118c3m4qA_
not modelled 54.7 25
PDB header:ligase
Chain: A: PDB Molecule:asparaginyl-trna synthetase, putative;
PDBTitle: entamoeba histolytica asparaginyl-trna synthetase (asnrs)
119d1ub7a2
not modelled 52.5 26
Fold:Thiolase-like
Superfamily:Thiolase-like
Family:Chalcone synthase-like
120d1z7ma1
not modelled 51.8 14
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite