Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2556c_(-)_2876586_2876975
DateWed Aug 7 12:50:19 BST 2019
Unique Job ID45627bf60fa85b80
SequenceVLDVDTARRR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.133 Y:43.320 Z:53.667
Model (left) based on template c2p6cB_
Top template information
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:aq_2013 protein;
PDBTitle: crystal structure of hypothetical protein aq_2013 from aquifex2 aeolicus vf5.
Confidence and coverage
Confidence:100.0% Coverage: 97%
125 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2p6cB_



100.0 28
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:aq_2013 protein;
PDBTitle: crystal structure of hypothetical protein aq_2013 from aquifex2 aeolicus vf5.
2d1vpha_



100.0 29
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
3d1vmja_



100.0 22
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
4c1ve0A_



100.0 28
PDB header:metal binding protein
Chain: A: PDB Molecule:hypothetical protein (st2072);
PDBTitle: crystal structure of uncharacterized protein st2072 from sulfolobus2 tokodaii
5c2p6hB_



100.0 32
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of hypothetical protein ape1520 from aeropyrum2 pernix k1
6d1vmha_



100.0 26
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
7d1vmfa_



100.0 24
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
8c2cu5C_



100.0 28
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:conserved hypothetical protein tt1486;
PDBTitle: crystal structure of the conserved hypothetical protein tt1486 from2 thermus thermophilus hb8
9d1ojja_



38.1 11
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
10c2rfyB_



35.6 12
PDB header:hydrolase
Chain: B: PDB Molecule:cellulose 1,4-beta-cellobiosidase;
PDBTitle: crystal structure of cellobiohydrolase from melanocarpus albomyces2 complexed with cellobiose
11c4zzpB_



34.8 17
PDB header:hydrolase
Chain: B: PDB Molecule:cellulose 1,4-beta-cellobiosidase;
PDBTitle: dictyostelium purpureum cellobiohydrolase cel7a apo structure
12d1gpia_



34.8 15
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
13c2yg1A_



34.7 14
PDB header:hydrolase
Chain: A: PDB Molecule:cellulose 1,4-beta-cellobiosidase;
PDBTitle: apo structure of cellobiohydrolase 1 (cel7a) from heterobasidion2 annosum
14d2v3ia1



33.8 14
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
15c4csiB_



33.4 17
PDB header:hydrolase
Chain: B: PDB Molecule:cellulase;
PDBTitle: crystal structure of the thermostable cellobiohydrolase2 cel7a from the fungus humicola grisea var. thermoidea.
16d1q9ha_



31.3 12
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
17c2mdaB_



31.2 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:tyrosine 3-monooxygenase;
PDBTitle: the solution structure of the regulatory domain of tyrosine2 hydroxylase
18d3ovwa_



30.2 15
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
19c4hapB_



30.2 12
PDB header:hydrolase
Chain: B: PDB Molecule:gh7 family protein;
PDBTitle: crystal structure of a gh7 family cellobiohydrolase from limnoria2 quadripunctata in complex with cellobiose
20d2qmwa2



29.4 7
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Phenylalanine metabolism regulatory domain
21c4xnnA_



not modelled 28.7 15
PDB header:hydrolase
Chain: A: PDB Molecule:cellobiohydrolase chbi;
PDBTitle: crystal structure of a gh7 family cellobiohydrolase from daphnia pulex
22c3hi2D_



not modelled 25.2 28
PDB header:dna binding protein/toxin
Chain: D: PDB Molecule:motility quorum-sensing regulator mqsr;
PDBTitle: structure of the n-terminal domain of the e. coli antitoxin mqsa2 (ygit/b3021) in complex with the e. coli toxin mqsr (ygiu/b3022)
23d1eg1a_



not modelled 25.2 12
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Glycosyl hydrolase family 7 catalytic core
24c5o51A_



not modelled 19.3 25
PDB header:protein binding
Chain: A: PDB Molecule:rho guanyl nucleotide exchange factor (rom2), putative;
PDBTitle: afrom2 cnh domain
25d1n8ia_



not modelled 19.2 21
Fold:TIM beta/alpha-barrel
Superfamily:Malate synthase G
Family:Malate synthase G
26c3luyA_



not modelled 16.8 21
PDB header:isomerase
Chain: A: PDB Molecule:probable chorismate mutase;
PDBTitle: putative chorismate mutase from bifidobacterium adolescentis
27d1phza1



not modelled 15.8 7
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Phenylalanine metabolism regulatory domain
28c3mwbA_



not modelled 15.7 7
PDB header:lyase
Chain: A: PDB Molecule:prephenate dehydratase;
PDBTitle: the crystal structure of prephenate dehydratase in complex with l-phe2 from arthrobacter aurescens to 2.0a
29d1i8fa_



not modelled 14.4 16
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
30d2hq2a1



not modelled 13.1 20
Fold:Heme iron utilization protein-like
Superfamily:Heme iron utilization protein-like
Family:HemS/ChuS-like
31c4lubA_



not modelled 12.2 7
PDB header:lyase
Chain: A: PDB Molecule:putative prephenate dehydratase;
PDBTitle: x-ray structure of prephenate dehydratase from streptococcus mutans
32c5yvfD_



not modelled 12.0 20
PDB header:plant protein
Chain: D: PDB Molecule:bfa1;
PDBTitle: crystal structure of bfa1
33c6c6lO_



not modelled 11.6 6
PDB header:membrane protein
Chain: O: PDB Molecule:v-type proton atpase subunit f;
PDBTitle: yeast vacuolar atpase vo in lipid nanodisc
34d1cl1a_



not modelled 11.1 22
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:Cystathionine synthase-like
35c6cgvW_



not modelled 10.9 47
PDB header:virus
Chain: W: PDB Molecule:pre-protein vi;
PDBTitle: revised crystal structure of human adenovirus
36d1omwa2



not modelled 10.8 31
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
37d1dq3a2



not modelled 10.5 26
Fold:dsRBD-like
Superfamily:YcfA/nrd intein domain
Family:PI-Pfui intein middle domain
38c3er0A_



not modelled 10.4 18
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5a-2;
PDBTitle: crystal structure of the full length eif5a from2 saccharomyces cerevisiae
39c2qdrA_



not modelled 9.9 26
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative dioxygenase (npun_f5605) from nostoc2 punctiforme pcc 73102 at 2.60 a resolution
40d2j0pa1



not modelled 9.9 14
Fold:Heme iron utilization protein-like
Superfamily:Heme iron utilization protein-like
Family:HemS/ChuS-like
41d1ud2a1



not modelled 9.6 26
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
42d2drpa2



not modelled 9.6 13
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
43c3c9pA_



not modelled 9.5 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein sp1917;
PDBTitle: crystal structure of uncharacterized protein sp1917
44c6dgaA_



not modelled 8.3 17
PDB header:unknown function
Chain: A: PDB Molecule:rpfr;
PDBTitle: cronobacter turicensis rpfr quorum-sensing receptor rpff interaction2 domain
45d1rutx4



not modelled 8.2 0
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
46c5dx5B_



not modelled 8.1 22
PDB header:lyase
Chain: B: PDB Molecule:methionine gamma-lyase;
PDBTitle: crystal structure of methionine gamma-lyase from clostridium2 sporogenes
47c2gqnB_



not modelled 7.9 22
PDB header:lyase
Chain: B: PDB Molecule:cystathionine beta-lyase;
PDBTitle: cystathionine beta-lyase (cbl) from escherichia coli in complex with2 n-hydrazinocarbonylmethyl-2-nitro-benzamide
48d1d8ca_



not modelled 7.7 22
Fold:TIM beta/alpha-barrel
Superfamily:Malate synthase G
Family:Malate synthase G
49c2qmxB_



not modelled 7.2 7
PDB header:ligase
Chain: B: PDB Molecule:prephenate dehydratase;
PDBTitle: the crystal structure of l-phe inhibited prephenate dehydratase from2 chlorobium tepidum tls
50c4mcjC_



not modelled 6.9 19
PDB header:transferase
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative nucleoside deoxyribosyltransferase2 (bdi_0649) from parabacteroides distasonis atcc 8503 at 2.40 a3 resolution
51c4ue0A_



not modelled 6.8 39
PDB header:viral protein
Chain: A: PDB Molecule:fiber;
PDBTitle: structure of the bovine atadenovirus type 4 fibre head protein
52c2l57A_



not modelled 6.8 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens
53d1mwza_



not modelled 6.6 16
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
54c5dggB_



not modelled 6.3 38
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: central domain of uncharacterized lpg1148 protein from legionella2 pneumophila
55d1xo8a_



not modelled 6.3 35
Fold:Immunoglobulin-like beta-sandwich
Superfamily:LEA14-like
Family:LEA14-like
56c2ogxB_



not modelled 6.3 13
PDB header:metal binding protein
Chain: B: PDB Molecule:molybdenum storage protein subunit beta;
PDBTitle: the crystal structure of the molybdenum storage protein from2 azotobacter vinelandii loaded with polyoxotungstates (wsto)
57c3i38E_



not modelled 5.5 33
PDB header:chaperone
Chain: E: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
58c3i38C_



not modelled 5.5 33
PDB header:chaperone
Chain: C: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
59c3i38L_



not modelled 5.4 33
PDB header:chaperone
Chain: L: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
60c3jb9b_



not modelled 5.4 16
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:pre-mrna-splicing factor cwf10;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution

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