Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2562_(-)_2881768_2882157
DateWed Aug 7 12:50:20 BST 2019
Unique Job IDbb85c42bd1ec604a
SequenceVAEQKVKRNV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:14.445 Y:14.861 Z:37.740
Model (left) based on template c4pkyE_
Top template information
PDB header:transcription/cell cycle
Chain: E: PDB Molecule:transforming acidic coiled-coil-containing protein 3;
PDBTitle: arnt/hif transcription factor/coactivator complex
Confidence and coverage
Confidence: 11.7% Coverage: 18%
23 residues ( 18% of your sequence) have been modelled with 11.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4pkyE_



11.7 39
PDB header:transcription/cell cycle
Chain: E: PDB Molecule:transforming acidic coiled-coil-containing protein 3;
PDBTitle: arnt/hif transcription factor/coactivator complex
2c3thgA_



11.1 28
PDB header:protein binding
Chain: A: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1,
PDBTitle: crystal structure of the creosote rubisco activase c-domain
3c5u03C_



9.4 28
PDB header:ligase, protein fibril
Chain: C: PDB Molecule:ctp synthase 1;
PDBTitle: cryo-em structure of the human ctp synthase filament
4d1l3ac_



9.4 56
Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:Plant transcriptional regulator PBF-2
5c2muqA_



7.2 75
PDB header:ubiquitin binding protein
Chain: A: PDB Molecule:fanconi anemia-associated protein of 20 kda;
PDBTitle: solution structure of the human faap20 ubz
6c3n1hA_



7.0 50
PDB header:dna binding protein
Chain: A: PDB Molecule:stwhy2;
PDBTitle: crystal structure of stwhy2
7c2murA_



6.6 75
PDB header:protein binding
Chain: A: PDB Molecule:fanconi anemia-associated protein of 20 kda;
PDBTitle: solution structure of the human faap20 ubz-ubiquitin complex
8d1l3aa_



6.5 63
Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:Plant transcriptional regulator PBF-2
9c1l3aD_



6.5 63
PDB header:dna binding protein
Chain: D: PDB Molecule:p24: plant transcriptional regulator pbf-2;
PDBTitle: structure of the plant transcriptional regulator pbf-2
10d1p94a_



6.5 71
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:CopG-like
11c4xhiB_



6.5 42
PDB header:transcription
Chain: B: PDB Molecule:rna-dependent rna polymerase;
PDBTitle: crystal structure of native thosea asigna virus rna-dependent rna2 polymerase (rdrp) at 2.15 angstrom resolution
12c3draB_



6.4 40
PDB header:transferase
Chain: B: PDB Molecule:geranylgeranyltransferase type i beta subunit;
PDBTitle: candida albicans protein geranylgeranyltransferase-i2 complexed with ggpp
13c5l85B_



6.2 32
PDB header:signaling protein
Chain: B: PDB Molecule:nuclear fragile x mental retardation-interacting protein 1;
PDBTitle: solution structure of the complex between human znhit3 and nufip12 proteins
14c3j0cH_



6.1 16
PDB header:virus
Chain: H: PDB Molecule:e2 envelope glycoprotein;
PDBTitle: models of e1, e2 and cp of venezuelan equine encephalitis virus tc-832 strain restrained by a near atomic resolution cryo-em map
15c1tnuL_



6.1 40
PDB header:transferase
Chain: L: PDB Molecule:geranylgeranyl transferase type i beta subunit;
PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a gcincckvl peptide derived from rhob
16d1n4qb_



6.1 40
Fold:alpha/alpha toroid
Superfamily:Terpenoid cyclases/Protein prenyltransferases
Family:Protein prenyltransferases
17d1kf6a1



6.1 39
Fold:Spectrin repeat-like
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
18c1dmlH_



5.9 62
PDB header:dna binding protein/transferase
Chain: H: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol
19c1dmlF_



5.9 62
PDB header:dna binding protein/transferase
Chain: F: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol
20c1dmlB_



5.8 62
PDB header:dna binding protein/transferase
Chain: B: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol
21c1dmlD_



not modelled 5.8 62
PDB header:dna binding protein/transferase
Chain: D: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol

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