Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2588c_(yajC)_2915856_2916203
DateWed Aug 7 12:50:22 BST 2019
Unique Job IDed961e0069352093
SequenceMESFVLFLPF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.330 Y:24.269 Z:37.730
Model (left) based on template c2rddB_
Top template information
PDB header:membrane protein/transport protein
Chain: B: PDB Molecule:upf0092 membrane protein yajc;
PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
Confidence and coverage
Confidence: 98.9% Coverage: 32%
37 residues ( 32% of your sequence) have been modelled with 98.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
86 residues ( 75%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2rddB_
98.9 22
PDB header:membrane protein/transport protein
Chain: B: PDB Molecule:upf0092 membrane protein yajc;
PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
2c4ytlB_
91.6 18
PDB header:transcription
Chain: B: PDB Molecule:transcription elongation factor spt5;
PDBTitle: structure of the kow2-kow3 domain of transcription elongation factor2 spt5.
3c2qf4A_
86.7 6
PDB header:structural protein
Chain: A: PDB Molecule:cell shape determining protein mrec;
PDBTitle: high resolution structure of the major periplasmic domain from the2 cell shape-determining filament mrec (orthorhombic form)
4c2j5uB_
86.7 26
PDB header:cell shape regulation
Chain: B: PDB Molecule:mrec protein;
PDBTitle: mrec lysteria monocytogenes
5c2vv5D_
86.1 19
PDB header:membrane protein
Chain: D: PDB Molecule:small-conductance mechanosensitive channel;
PDBTitle: the open structure of mscs
6d2do3a1
84.7 19
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:SPT5 KOW domain-like
7d2vv5a1
83.5 19
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Mechanosensitive channel protein MscS (YggB), middle domain
8d1pkma1
83.2 15
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:Pyruvate kinase beta-barrel domain
9d2g50a1
83.0 15
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:Pyruvate kinase beta-barrel domain
10c3t9nG_
81.0 17
PDB header:membrane protein
Chain: G: PDB Molecule:small-conductance mechanosensitive channel;
PDBTitle: crystal structure of a membrane protein
11c2e6zA_
80.3 24
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt5;
PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5
12c5t4oJ_
79.7 11
PDB header:hydrolase
Chain: J: PDB Molecule:atp synthase subunit b;
PDBTitle: autoinhibited e. coli atp synthase state 1
13c4hw9E_
79.0 18
PDB header:membrane protein
Chain: E: PDB Molecule:mechanosensitive channel mscs;
PDBTitle: crystal structure of helicobacter pylori mscs (closed state)
14d1liua1
75.9 15
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:Pyruvate kinase beta-barrel domain
15c6bs8C_
75.6 15
PDB header:hydrolase
Chain: C: PDB Molecule:replicative dna helicase;
PDBTitle: the class 3 dnab intein from mycobacterium smegmatis
16d1e0ta1
73.0 17
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:Pyruvate kinase beta-barrel domain
17c2e70A_
72.9 9
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt5;
PDBTitle: solution structure of the fifth kow motif of human2 transcription elongation factor spt5
18c6fkip_
71.6 11
PDB header:membrane protein
Chain: P: PDB Molecule:atp synthase subunit c, chloroplastic;
PDBTitle: chloroplast f1fo conformation 3
19c6fkib_
69.0 6
PDB header:membrane protein
Chain: B: PDB Molecule:atp synthase subunit beta, chloroplastic;
PDBTitle: chloroplast f1fo conformation 3
20c4gn0D_
57.3 10
PDB header:signaling protein
Chain: D: PDB Molecule:hamp domain of af1503;
PDBTitle: de novo phasing of a hamp-complex using an improved arcimboldo method
21d1a3xa1
not modelled 56.7 12
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:Pyruvate kinase beta-barrel domain
22c5nbbA_
not modelled 55.0 21
PDB header:chaperone
Chain: A: PDB Molecule:rna chaperone proq;
PDBTitle: structure of the c-terminal domain of the escherichia coli proq rna2 binding protein
23c4l0jA_
not modelled 54.2 18
PDB header:hydrolase
Chain: A: PDB Molecule:dna helicase i;
PDBTitle: structure of a translocation signal domain mediating conjugative2 transfer by type iv secretion systems
24d1nxza1
not modelled 53.3 19
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:YggJ N-terminal domain-like
25c2n2aA_
not modelled 52.9 19
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: spatial structure of her2/erbb2 dimeric transmembrane domain in the2 presence of cytoplasmic juxtamembrane domains
26c1rl2A_
not modelled 52.3 17
PDB header:ribosomal protein
Chain: A: PDB Molecule:protein (ribosomal protein l2);
PDBTitle: ribosomal protein l2 rna-binding domain from bacillus2 stearothermophilus
27c2lclA_
not modelled 51.8 22
PDB header:transcription
Chain: A: PDB Molecule:transcriptional activator rfah;
PDBTitle: solution structure of rfah carboxyterminal domain
28c4gopX_
not modelled 51.6 4
PDB header:dna binding protein/dna
Chain: X: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure and conformational change of a replication protein a2 heterotrimer bound to ssdna
29c5xonW_
not modelled 51.3 11
PDB header:transcription/rna
Chain: W: PDB Molecule:protein that forms a complex with spt4p;
PDBTitle: rna polymerase ii elongation complex bound with spt4/5 and tfiis
30d1vhka1
not modelled 46.0 14
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:YggJ N-terminal domain-like
31d2j01d1
not modelled 45.5 21
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:C-terminal domain of ribosomal protein L2
32d1ib8a1
not modelled 45.5 15
Fold:Sm-like fold
Superfamily:YhbC-like, C-terminal domain
Family:YhbC-like, C-terminal domain
33c5lp5F_
not modelled 45.1 31
PDB header:hydrolase/antibiotic
Chain: F: PDB Molecule:rod shape-determining protein (mrec);
PDBTitle: complex between penicillin-binding protein (pbp2) and mrec from2 helicobacter pylori
34d2oara1
not modelled 45.0 11
Fold:Gated mechanosensitive channel
Superfamily:Gated mechanosensitive channel
Family:Gated mechanosensitive channel
35c2khiA_
not modelled 44.4 21
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1
36d1nppa2
not modelled 43.9 13
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:N-utilization substance G protein NusG, C-terminal domain
37c2mfiA_
not modelled 43.7 20
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: domain 1 of e. coli ribosomal protein s1
38c6fc6A_
not modelled 43.7 5
PDB header:cell cycle
Chain: A: PDB Molecule:nuclear fusion protein bik1;
PDBTitle: bik1 cap-gly domain with etf peptide from bim1
39c5y4oA_
not modelled 42.8 14
PDB header:membrane protein
Chain: A: PDB Molecule:low conductance mechanosensitive channel ynai;
PDBTitle: cryo-em structure of mscs channel, ynai
40d3bzka4
not modelled 41.6 15
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
41c1dbgA_
not modelled 41.0 17
PDB header:lyase
Chain: A: PDB Molecule:chondroitinase b;
PDBTitle: crystal structure of chondroitinase b
42c3d5bD_
not modelled 40.8 17
PDB header:ribosome
Chain: D: PDB Molecule:50s ribosomal protein l2;
PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 50s subunit of one 70s ribosome. the entire crystal3 structure contains two 70s ribosomes as described in remark 400.
43c4uc4A_
not modelled 40.2 22
PDB header:replication
Chain: A: PDB Molecule:lysine-specific demethylase 4b;
PDBTitle: crystal structure of hybrid tudor domain of human lysine demethylase2 kdm4b
44c5jefA_
not modelled 39.9 5
PDB header:transferase
Chain: A: PDB Molecule:nitrate/nitrite sensor protein narq;
PDBTitle: fragment of nitrate/nitrite sensor histidine kinase narq (wt) in2 asymmetric holo state
45c2l8kA_
not modelled 39.7 26
PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 7;
PDBTitle: nmr structure of the arterivirus nonstructural protein 7 alpha (nsp72 alpha)
46c2nbgA_
not modelled 39.3 16
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: structure of the geobacillus stearothermophilus if2 g3-subdomain
47d2qamc1
not modelled 39.0 17
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:C-terminal domain of ribosomal protein L2
48c5ohoB_
not modelled 38.4 19
PDB header:transcription
Chain: B: PDB Molecule:transcription elongation factor spt5;
PDBTitle: crystal structure of the kowx-kow4 domain of human dsif
49c6ir9W_
not modelled 38.2 15
PDB header:transcription/rna/dna
Chain: W: PDB Molecule:spt5;
PDBTitle: rna polymerase ii elongation complex bound with elf1 and spt4/5,2 stalled at shl(-1) of the nucleosome
50c2khjA_
not modelled 37.3 26
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: nmr structure of the domain 6 of the e. coli ribosomal2 protein s1
51c2mi6A_
not modelled 36.0 20
PDB header:transcription
Chain: A: PDB Molecule:transcription termination/antitermination protein nusg;
PDBTitle: solution structure of the carboxy terminal domain of nusg from2 mycobacterium tuberculosis
52c2jvvA_
not modelled 35.9 21
PDB header:transcription
Chain: A: PDB Molecule:transcription antitermination protein nusg;
PDBTitle: solution structure of e. coli nusg carboxyterminal domain
53c2kvqG_
not modelled 35.9 21
PDB header:transcription
Chain: G: PDB Molecule:transcription antitermination protein nusg;
PDBTitle: solution structure of nuse:nusg-ctd complex
54d2cp6a1
not modelled 35.5 18
Fold:SH3-like barrel
Superfamily:Cap-Gly domain
Family:Cap-Gly domain
55c1d8lA_
not modelled 34.3 10
PDB header:gene regulation
Chain: A: PDB Molecule:protein (holliday junction dna helicase ruva);
PDBTitle: e. coli holliday junction binding protein ruva nh2 region lacking2 domain iii
56c1t5aB_
not modelled 34.0 12
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase, m2 isozyme;
PDBTitle: human pyruvate kinase m2
57d1rl2a1
not modelled 34.0 17
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:C-terminal domain of ribosomal protein L2
58c3p8bB_
not modelled 33.7 30
PDB header:transferase/transcription
Chain: B: PDB Molecule:transcription antitermination protein nusg;
PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5
59c1kqsA_
not modelled 33.5 13
PDB header:ribosome
Chain: A: PDB Molecule:ribosomal protein l2;
PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis
60c6qh2A_
not modelled 33.1 18
PDB header:signaling protein
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: solution nmr ensemble for a chimeric kh-s1 domain construct of2 exosomal polynucleotide phosphrylase at 298k compiled using the3 comand method
61d1vqoa1
not modelled 32.5 13
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:C-terminal domain of ribosomal protein L2
62c4ytkA_
not modelled 31.9 29
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt5;
PDBTitle: structure of the kow1-linker1 domain of transcription elongation2 factor spt5
63d1bvsa3
not modelled 31.9 19
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:DNA helicase RuvA subunit, N-terminal domain
64c1aqfB_
not modelled 31.8 15
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase;
PDBTitle: pyruvate kinase from rabbit muscle with mg, k, and l-2 phospholactate
65c3qtgA_
not modelled 31.3 14
PDB header:transferase
Chain: A: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of pyruvate kinase from pyrobaculum aerophilum
66c2k8iA_
not modelled 30.8 26
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: solution structure of e.coli slyd
67c2oarA_
not modelled 30.5 11
PDB header:membrane protein
Chain: A: PDB Molecule:large-conductance mechanosensitive channel;
PDBTitle: mechanosensitive channel of large conductance (mscl)
68d1ofla_
not modelled 30.5 17
Fold:Single-stranded right-handed beta-helix
Superfamily:Pectin lyase-like
Family:Chondroitinase B
69c1t3oA_
not modelled 29.6 17
PDB header:rna binding protein
Chain: A: PDB Molecule:carbon storage regulator;
PDBTitle: solution structure of csra, a bacterial carbon storage2 regulatory protein
70c5z1lL_
not modelled 29.4 13
PDB header:protein fibril
Chain: L: PDB Molecule:flagellin;
PDBTitle: cryo-em structure of methanoccus maripaludis archaellum
71c4v19Y_
not modelled 29.3 24
PDB header:ribosome
Chain: Y: PDB Molecule:mitoribosomal protein ul24m, mrpl24;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
72c5gkdA_
not modelled 28.9 17
PDB header:lyase
Chain: A: PDB Molecule:alygc;
PDBTitle: structure of pl6 family alginate lyase alygc
73c4kf9A_
not modelled 28.7 24
PDB header:transferase
Chain: A: PDB Molecule:glutathione s-transferase protein;
PDBTitle: crystal structure of a glutathione transferase family member from2 ralstonia solanacearum, target efi-501780, with bound gsh coordinated3 to a zinc ion, ordered active site
74c2kfwA_
not modelled 28.6 26
PDB header:isomerase
Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase
PDBTitle: solution structure of full-length slyd from e.coli
75c3pr9A_
not modelled 28.5 15
PDB header:chaperone
Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase;
PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26
76d1a8pa1
not modelled 28.3 17
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Riboflavin synthase domain-like
Family:Ferredoxin reductase FAD-binding domain-like
77c3f42A_
not modelled 28.1 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein hp0035;
PDBTitle: crystal structure of uncharacterized protein hp0035 from helicobacter2 pylori
78c1m1gB_
not modelled 27.8 13
PDB header:transcription
Chain: B: PDB Molecule:transcription antitermination protein nusg;
PDBTitle: crystal structure of aquifex aeolicus n-utilization2 substance g (nusg), space group p2(1)
79c3pifD_
not modelled 27.4 23
PDB header:hydrolase
Chain: D: PDB Molecule:5'->3' exoribonuclease (xrn1);
PDBTitle: crystal structure of the 5'->3' exoribonuclease xrn1, e178q mutant in2 complex with manganese
80c4nnkA_
not modelled 27.3 9
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: structural basis for targeting the ribosomal protein s1 of2 mycobacterium tuberculosis by pyrazinamide
81d1j8ba_
not modelled 27.3 12
Fold:YbaB-like
Superfamily:YbaB-like
Family:YbaB-like
82c3qiiA_
not modelled 27.2 26
PDB header:transcription regulator
Chain: A: PDB Molecule:phd finger protein 20;
PDBTitle: crystal structure of tudor domain 2 of human phd finger protein 20
83c4v19D_
not modelled 27.2 9
PDB header:ribosome
Chain: D: PDB Molecule:mitoribosomal protein ul2m, mrpl2;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
84c4q7jD_
not modelled 27.2 19
PDB header:translation/transferase
Chain: D: PDB Molecule:30s ribosomal protein s1;
PDBTitle: complex structure of viral rna polymerase
85c3ma8A_
not modelled 27.1 29
PDB header:transferase
Chain: A: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of cgd1_2040, a pyruvate kinase from cryptosporidium2 parvum
86d1sroa_
not modelled 26.6 24
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
87d1pkla1
not modelled 26.5 12
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:Pyruvate kinase beta-barrel domain
88d1ixra2
not modelled 25.8 18
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:DNA helicase RuvA subunit, N-terminal domain
89d1nz9a_
not modelled 25.6 20
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:N-utilization substance G protein NusG, C-terminal domain
90c2dzcA_
not modelled 25.6 16
PDB header:ligase
Chain: A: PDB Molecule:biotin--[acetyl-coa-carboxylase] ligase;
PDBTitle: crystal structure of biotin protein ligase from pyrococcus2 horikoshii, mutation r48a
91d2if6a1
not modelled 25.6 20
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:YiiX-like
92c5mmiV_
not modelled 24.6 24
PDB header:ribosome
Chain: V: PDB Molecule:plastid ribosomal protein ul24c;
PDBTitle: structure of the large subunit of the chloroplast ribosome
93d1xnea_
not modelled 24.5 13
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:ProFAR isomerase associated domain
94c6du6D_
not modelled 24.5 22
PDB header:transferase
Chain: D: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of the pyruvate kinase (pk1) from the mosquito aedes2 aegypti
95c2h5xA_
not modelled 24.4 14
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva;
PDBTitle: ruva from mycobacterium tuberculosis
96c1vw4Q_
not modelled 23.5 31
PDB header:ribosome
Chain: Q: PDB Molecule:54s ribosomal protein l40, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
97c6b8hb_
not modelled 23.0 16
PDB header:membrane protein
Chain: B: PDB Molecule:atp synthase subunit alpha, mitochondrial;
PDBTitle: mosaic model of yeast mitochondrial atp synthase monomer
98c1vpzB_
not modelled 23.0 17
PDB header:rna binding protein
Chain: B: PDB Molecule:carbon storage regulator homolog;
PDBTitle: crystal structure of a putative carbon storage regulator protein2 (csra, pa0905) from pseudomonas aeruginosa at 2.05 a resolution
99d1x5qa1
not modelled 22.6 13
Fold:PDZ domain-like
Superfamily:PDZ domain-like
Family:PDZ domain
100c3qglD_
not modelled 22.5 19
PDB header:protein binding
Chain: D: PDB Molecule:sorting nexin-27;
PDBTitle: crystal structure of pdz domain of sorting nexin 27 (snx27) in complex2 with the eseskv peptide corresponding to the c-terminal tail of girk3
101d2zjrr1
not modelled 22.3 21
Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:Ribosomal proteins L24p and L21e
102c4ce4D_
not modelled 22.1 9
PDB header:ribosome
Chain: D: PDB Molecule:mrpl2;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
103c3iz5G_
not modelled 21.7 15
PDB header:ribosome
Chain: G: PDB Molecule:60s ribosomal protein l6 (l6e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
104c2pqaB_
not modelled 21.6 15
PDB header:replication
Chain: B: PDB Molecule:replication protein a 14 kda subunit;
PDBTitle: crystal structure of full-length human rpa 14/32 heterodimer
105c1ixrB_
not modelled 21.4 8
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction dna helicase ruva;
PDBTitle: ruva-ruvb complex
106c1ybxA_
not modelled 21.3 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: conserved hypothetical protein cth-383 from clostridium thermocellum
107c3nx6A_
not modelled 21.3 7
PDB header:chaperone
Chain: A: PDB Molecule:10kda chaperonin;
PDBTitle: crystal structure of co-chaperonin, groes (xoo4289) from xanthomonas2 oryzae pv. oryzae kacc10331
108d2pi2e1
not modelled 21.1 15
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
109d1vpza_
not modelled 21.1 17
Fold:CsrA-like
Superfamily:CsrA-like
Family:CsrA-like
110c2y35A_
not modelled 21.0 24
PDB header:hydrolase/dna
Chain: A: PDB Molecule:ld22664p;
PDBTitle: crystal structure of xrn1-substrate complex
111d1fdra1
not modelled 21.0 25
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Riboflavin synthase domain-like
Family:Ferredoxin reductase FAD-binding domain-like
112c5dmbD_
not modelled 20.9 31
PDB header:translation
Chain: D: PDB Molecule:carbon storage regulator homolog;
PDBTitle: crystal structure of a translational regulator bound to a flagellar2 assembly factor
113c4xtrG_
not modelled 20.8 30
PDB header:hydrolase/transport protein
Chain: G: PDB Molecule:pep12p;
PDBTitle: structure of get3 bound to the transmembrane domain of pep12
114d1cuka3
not modelled 20.8 18
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:DNA helicase RuvA subunit, N-terminal domain
115c2qqsB_
not modelled 20.7 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:jmjc domain-containing histone demethylation
PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
116c2he4A_
not modelled 20.7 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2;
PDBTitle: the crystal structure of the second pdz domain of human2 nherf-2 (slc9a3r2) interacting with a mode 1 pdz binding3 motif
117c2ks1A_
not modelled 20.5 26
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
118c3mk7F_
not modelled 20.5 12
PDB header:oxidoreductase
Chain: F: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit p;
PDBTitle: the structure of cbb3 cytochrome oxidase
119d2cp0a1
not modelled 20.5 26
Fold:SH3-like barrel
Superfamily:Cap-Gly domain
Family:Cap-Gly domain
120d2z0sa1
not modelled 20.2 17
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below