Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2613c_(-)_2940619_2941206
DateWed Aug 7 12:50:25 BST 2019
Unique Job IDd744c2e85243a163
SequenceVSDEDRTDRA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:51.868 Y:41.574 Z:49.318
Model (left) based on template c3anoA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:ap-4-a phosphorylase;
PDBTitle: crystal structure of a novel diadenosine 5',5'''-p1,p4-tetraphosphate2 phosphorylase from mycobacterium tuberculosis h37rv
Confidence and coverage
Confidence:100.0% Coverage: 81%
158 residues ( 81% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3anoA_



100.0 100
PDB header:transferase
Chain: A: PDB Molecule:ap-4-a phosphorylase;
PDBTitle: crystal structure of a novel diadenosine 5',5'''-p1,p4-tetraphosphate2 phosphorylase from mycobacterium tuberculosis h37rv
2c3ksvA_



100.0 21
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: hypothetical protein from leishmania major
3c3l7xA_



100.0 23
PDB header:cell cycle
Chain: A: PDB Molecule:putative hit-like protein involved in cell-cycle
PDBTitle: the crystal structure of smu.412c from streptococcus mutans ua159
4c3imiB_



100.0 23
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hit family protein;
PDBTitle: 2.01 angstrom resolution crystal structure of a hit family protein2 from bacillus anthracis str. 'ames ancestor'
5d1y23a_



100.0 25
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
6c2eo4A_



100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:150aa long hypothetical histidine triad nucleotide-binding
PDBTitle: crystal structure of hypothetical histidine triad nucleotide-binding2 protein st2152 from sulfolobus tokodaii strain7
7c6iq1A_



100.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:adenosine 5'-monophosphoramidase;
PDBTitle: crystal structure of histidine triad nucleotide-binding protein from2 candida albicans
8c3lb5B_



100.0 21
PDB header:cell cycle
Chain: B: PDB Molecule:hit-like protein involved in cell-cycle regulation;
PDBTitle: crystal structure of hit-like protein involved in cell-cycle2 regulation from bartonella henselae with unknown ligand
9c5cs2A_



100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:histidine triad protein;
PDBTitle: crystal structure of plasmodium falciparum diadenosine triphosphate2 hydrolase in complex with cyclomarin a
10c1emsB_



100.0 24
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein
11c3o0mB_



100.0 24
PDB header:hydrolase
Chain: B: PDB Molecule:hit family protein;
PDBTitle: crystal structure of a zn-bound histidine triad family protein from2 mycobacterium smegmatis
12c1zwjA_



100.0 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative galactose-1-phosphate uridyl transferase;
PDBTitle: x-ray structure of galt-like protein from arabidopsis thaliana2 at5g18200
13c1gupC_



100.0 16
PDB header:nucleotidyltransferase
Chain: C: PDB Molecule:galactose-1-phosphate uridylyltransferase;
PDBTitle: structure of nucleotidyltransferase complexed with udp-2 galactose
14c3p0tB_



100.0 25
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an hit-like protein from mycobacterium2 paratuberculosis
15c5in3A_



100.0 15
PDB header:transferase
Chain: A: PDB Molecule:galactose-1-phosphate uridylyltransferase;
PDBTitle: crystal structure of glucose-1-phosphate bound nucleotidylated human2 galactose-1-phosphate uridylyltransferase
16d1emsa1



100.0 24
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
17d1z84a2



100.0 14
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
18d1guqa2



100.0 16
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
19d1fita_



100.0 30
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
20d2oika1



100.0 25
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
21c3r6fA_



not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:hit family protein;
PDBTitle: crystal structure of a zinc-containing hit family protein from2 encephalitozoon cuniculi
22d1rzya_



not modelled 100.0 18
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
23d1kpfa_



not modelled 100.0 19
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
24c3n1tE_



not modelled 100.0 18
PDB header:hydrolase
Chain: E: PDB Molecule:hit-like protein hint;
PDBTitle: crystal structure of the h101a mutant echint gmp complex
25c4eguA_



not modelled 99.9 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:histidine triad (hit) protein;
PDBTitle: 0.95a resolution structure of a histidine triad protein from2 clostridium difficile
26d1xqua_



not modelled 99.9 19
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
27c1xquA_



not modelled 99.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:hit family hydrolase;
PDBTitle: hit family hydrolase from clostridium thermocellum cth-393
28c6d6jB_



not modelled 99.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:hit family hydrolase;
PDBTitle: crystal structure of hit family hydrolase from legionella pneumophila2 philadelphia 1
29c3oj7A_



not modelled 99.9 25
PDB header:metal binding protein
Chain: A: PDB Molecule:putative histidine triad family protein;
PDBTitle: crystal structure of a histidine triad family protein from entamoeba2 histolytica, bound to sulfate
30c3i24B_



not modelled 99.9 18
PDB header:hydrolase
Chain: B: PDB Molecule:hit family hydrolase;
PDBTitle: crystal structure of a hit family hydrolase protein from vibrio2 fischeri. northeast structural genomics consortium target id vfr176
31c4q61J_



not modelled 99.9 19
PDB header:cell cycle
Chain: J: PDB Molecule:uncharacterized hit-like protein hp_0404;
PDBTitle: hit like protein from helicobacter pylori 26695
32c3oheA_



not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:histidine triad (hit) protein;
PDBTitle: crystal structure of a histidine triad protein (maqu_1709) from2 marinobacter aquaeolei vt8 at 1.20 a resolution
33c4incA_



not modelled 99.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:histidine triad nucleotide-binding protein 2,
PDBTitle: human histidine triad nucleotide binding protein 2
34c3nrdB_



not modelled 99.9 27
PDB header:nucleotide binding protein
Chain: B: PDB Molecule:histidine triad (hit) protein;
PDBTitle: crystal structure of a histidine triad (hit) protein (smc02904) from2 sinorhizobium meliloti 1021 at 2.06 a resolution
35c3i4sB_



not modelled 99.9 19
PDB header:hydrolase
Chain: B: PDB Molecule:histidine triad protein;
PDBTitle: crystal structure of histidine triad protein blr8122 from2 bradyrhizobium japonicum
36d1z84a1



not modelled 99.8 22
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
37c4ndgB_



not modelled 99.7 22
PDB header:dna binding protein/rna/dna
Chain: B: PDB Molecule:aprataxin;
PDBTitle: human aprataxin (aptx) bound to rna-dna and zn - adenosine vanadate2 transition state mimic complex
38c3splC_



not modelled 99.5 15
PDB header:hydrolase/dna
Chain: C: PDB Molecule:aprataxin-like protein;
PDBTitle: crystal structure of aprataxin ortholog hnt3 in complex with dna and2 amp
39c3jb9c_



not modelled 99.5 14
PDB header:rna binding protein/rna
Chain: C: PDB Molecule:u5 snrna;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
40c4i5wA_



not modelled 99.5 23
PDB header:transferase
Chain: A: PDB Molecule:5',5'''-p-1,p-4-tetraphosphate phosphorylase 2;
PDBTitle: crystal structure of yeast ap4a phosphorylase apa2 in complex with amp
41c4qvuA_



not modelled 99.4 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4931 family protein (bce0241) from bacillus2 cereus atcc 10987 at 2.65 a resolution
42c6id1U_



not modelled 99.1 18
PDB header:splicing
Chain: U: PDB Molecule:cwf19-like protein 2;
PDBTitle: cryo-em structure of a human intron lariat spliceosome after prp432 loaded (ils2 complex) at 2.9 angstrom resolution
43d3bl9a1



not modelled 98.9 25
Fold:HIT-like
Superfamily:HIT-like
Family:mRNA decapping enzyme DcpS C-terminal domain
44c3bl9B_



not modelled 98.7 25
PDB header:hydrolase
Chain: B: PDB Molecule:scavenger mrna-decapping enzyme dcps;
PDBTitle: synthetic gene encoded dcps bound to inhibitor dg157493
45d1vlra1



not modelled 98.6 23
Fold:HIT-like
Superfamily:HIT-like
Family:mRNA decapping enzyme DcpS C-terminal domain
46d1guqa1



not modelled 98.5 13
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
47c1xmlA_



not modelled 98.5 22
PDB header:chaperone
Chain: A: PDB Molecule:heat shock-like protein 1;
PDBTitle: structure of human dcps
48c5bv3C_



not modelled 98.4 17
PDB header:hydrolase
Chain: C: PDB Molecule:m7gpppx diphosphatase;
PDBTitle: yeast scavenger decapping enzyme in complex with m7gdp
49c6gbsB_



not modelled 98.3 24
PDB header:hydrolase
Chain: B: PDB Molecule:putative mrna decapping protein;
PDBTitle: crystal structure of the c. themophilum scavenger decapping enzyme2 dcps apo form
50c4lvjA_



not modelled 92.6 17
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:plasmid recombination enzyme;
PDBTitle: mobm relaxase domain (mobv; mob_pre) bound to plasmid pmv158 orit dna2 (22nt). mn-bound crystal structure at ph 5.5
51d2pofa1



not modelled 90.2 12
Fold:HIT-like
Superfamily:HIT-like
Family:CDH-like
52d1mg4a_



not modelled 49.8 22
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Doublecortin (DC)
Family:Doublecortin (DC)
53c5kciA_



not modelled 49.8 26
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein ypl067c;
PDBTitle: crystal structure of htc1
54d1uf0a_



not modelled 47.3 22
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Doublecortin (DC)
Family:Doublecortin (DC)
55c4atuI_



not modelled 38.4 22
PDB header:hydrolase
Chain: I: PDB Molecule:neuronal migration protein doublecortin;
PDBTitle: human doublecortin n-dc repeat plus linker, and tubulin (2xrp) docked2 into an 8a cryo-em map of doublecortin-stabilised microtubules3 reconstructed in absence of kinesin
56d1mjda_



not modelled 30.1 22
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Doublecortin (DC)
Family:Doublecortin (DC)
57c2dnfA_



not modelled 27.1 11
PDB header:protein binding
Chain: A: PDB Molecule:doublecortin domain-containing protein 2;
PDBTitle: solution structure of rsgi ruh-062, a dcx domain from human
58c1vr7A_



not modelled 26.6 15
PDB header:lyase
Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase proenzyme;
PDBTitle: crystal structure of s-adenosylmethionine decarboxylase proenzyme2 (tm0655) from thermotoga maritima at 1.2 a resolution
59c5ip4E_



not modelled 26.4 12
PDB header:transferase
Chain: E: PDB Molecule:neuronal migration protein doublecortin;
PDBTitle: x-ray structure of the c-terminal domain of human doublecortin
60d1vr7a1



not modelled 25.5 15
Fold:S-adenosylmethionine decarboxylase
Superfamily:S-adenosylmethionine decarboxylase
Family:Bacterial S-adenosylmethionine decarboxylase
61c2v4xA_



not modelled 23.8 15
PDB header:viral protein
Chain: A: PDB Molecule:capsid protein p27;
PDBTitle: crystal structure of jaagsiekte sheep retrovirus capsid n-2 terminal domain
62c6f21B_



not modelled 23.8 24
PDB header:toxin
Chain: B: PDB Molecule:dendroaspis polylepis mt9;
PDBTitle: crystal structure of toxin mt9 from mamba venom
63c1ayeA_



not modelled 22.3 19
PDB header:serine protease
Chain: A: PDB Molecule:procarboxypeptidase a2;
PDBTitle: human procarboxypeptidase a2
64d1tfsa_



not modelled 21.4 25
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
65d1ntxa_



not modelled 20.9 25
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
66d1v76a_



not modelled 20.7 17
Fold:Rof/RNase P subunit-like
Superfamily:Rof/RNase P subunit-like
Family:RNase P subunit p29-like
67c5mm2A_



not modelled 19.4 30
PDB header:virus
Chain: A: PDB Molecule:capsid protein vp4c;
PDBTitle: nora virus structure
68c2zaeC_



not modelled 18.8 17
PDB header:hydrolase
Chain: C: PDB Molecule:ribonuclease p protein component 1;
PDBTitle: crystal structure of protein ph1601p in complex with protein ph1771p2 of archaeal ribonuclease p from pyrococcus horikoshii ot3
69c5lxjA_



not modelled 18.3 29
PDB header:viral protein
Chain: A: PDB Molecule:phosphoprotein;
PDBTitle: solution nmr structure of the x domain of peste des petits ruminants2 phosphoprotein
70d1oqka_



not modelled 17.6 16
Fold:Rof/RNase P subunit-like
Superfamily:Rof/RNase P subunit-like
Family:RNase P subunit p29-like
71c5j1mD_



not modelled 17.3 40
PDB header:hydrolase
Chain: D: PDB Molecule:toxr-activated gene (tage);
PDBTitle: crystal structure of csd1-csd2 dimer ii
72c2qwwB_



not modelled 17.1 32
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
73d1iq9a_



not modelled 17.0 29
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
74c6k0aF_



not modelled 16.6 22
PDB header:rna binding protein/rna
Chain: F: PDB Molecule:ribonuclease p protein component 1;
PDBTitle: cryo-em structure of an archaeal ribonuclease p
75d1tsfa_



not modelled 16.3 20
Fold:Rof/RNase P subunit-like
Superfamily:Rof/RNase P subunit-like
Family:RNase P subunit p29-like
76d1b77a2



not modelled 16.2 13
Fold:DNA clamp
Superfamily:DNA clamp
Family:DNA polymerase processivity factor
77d3ebxa_



not modelled 15.9 29
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
78c6ahrD_



not modelled 14.7 14
PDB header:hydrolase/rna
Chain: D: PDB Molecule:ribonuclease p protein subunit p29;
PDBTitle: cryo-em structure of human ribonuclease p
79c3csqC_



not modelled 14.4 20
PDB header:hydrolase
Chain: C: PDB Molecule:morphogenesis protein 1;
PDBTitle: crystal and cryoem structural studies of a cell wall2 degrading enzyme in the bacteriophage phi29 tail
80c3txxD_



not modelled 13.4 28
PDB header:transferase
Chain: D: PDB Molecule:putrescine carbamoyltransferase;
PDBTitle: crystal structure of putrescine transcarbamylase from enterococcus2 faecalis
81d1qm7a_



not modelled 13.3 23
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
82c3bdeA_



not modelled 13.1 10
PDB header:unknown function
Chain: A: PDB Molecule:mll5499 protein;
PDBTitle: crystal structure of a dabb family protein with a ferredoxin-like fold2 (mll5499) from mesorhizobium loti maff303099 at 1.79 a resolution
83c5b0hB_



not modelled 12.6 24
PDB header:metal binding protein
Chain: B: PDB Molecule:leukocyte cell-derived chemotaxin-2;
PDBTitle: crystal structure of human leukocyte cell-derived chemotaxin 2
84d1vb0a_



not modelled 12.5 42
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
85d1vlva1



not modelled 12.2 17
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
86d1jb3a_



not modelled 12.2 30
Fold:OB-fold
Superfamily:TIMP-like
Family:The laminin-binding domain of agrin
87c2aydA_



not modelled 11.8 21
PDB header:transcription
Chain: A: PDB Molecule:wrky transcription factor 1;
PDBTitle: crystal structure of the c-terminal wrky domainof atwrky1, an sa-2 induced and partially npr1-dependent transcription factor
88c4agrB_



not modelled 11.7 26
PDB header:sugar binding protein
Chain: B: PDB Molecule:galectin;
PDBTitle: structure of a tetrameric galectin from cinachyrella sp. (ball2 sponge)
89c6b4aB_



not modelled 11.4 18
PDB header:structural protein
Chain: B: PDB Molecule:doublecortin;
PDBTitle: crystal structure of the c-terminal domain of doublecortin (tgdcx)2 from toxoplasma gondii me49
90d1g6ma_



not modelled 11.2 23
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
91d1pc0a_



not modelled 10.7 20
Fold:Rof/RNase P subunit-like
Superfamily:Rof/RNase P subunit-like
Family:RNase P subunit p29-like
92d1v6pa_



not modelled 10.6 23
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
93c3fmbA_



not modelled 10.5 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dimeric protein of unknown function and ferredoxin-like
PDBTitle: crystal structure of dimeric protein of unknown function and2 ferredoxin-like fold (yp_212648.1) from bacteroides fragilis nctc3 9343 at 1.85 a resolution
94d1dxha1



not modelled 10.5 17
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
95d1wiia_



not modelled 10.4 17
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Putative zinc binding domain
96c6q8iK_



not modelled 10.2 50
PDB header:splicing
Chain: K: PDB Molecule:protein red;
PDBTitle: nterminal domain of human smu1 in complex with human redmid
97c2yv9B_



not modelled 10.2 12
PDB header:metal transport
Chain: B: PDB Molecule:chloride intracellular channel exc-4;
PDBTitle: crystal structure of the clic homologue exc-4 from c.2 elegans
98d1ml4a1



not modelled 10.1 20
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
99c5op0B_



not modelled 9.9 21
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase ligd, polymerase domain;
PDBTitle: structure of prim-polc from mycobacterium smegmatis

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