Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2617c_(-)_2945857_2946297
DateWed Aug 7 12:50:26 BST 2019
Unique Job ID60b2dce301502818
SequenceMSIRPTTSPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:14.355 Y:35.413 Z:23.162
Model (left) based on template c5e9oC_
Top template information
PDB header:hydrolase
Chain: C: PDB Molecule:cellulase, glycosyl hydrolase family 5, tps linker, domain
PDBTitle: spirochaeta thermophila x module - cbm64 - mutant g504a
Confidence and coverage
Confidence: 20.1% Coverage: 15%
22 residues ( 15% of your sequence) have been modelled with 20.1% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5e9oC_



20.1 36
PDB header:hydrolase
Chain: C: PDB Molecule:cellulase, glycosyl hydrolase family 5, tps linker, domain
PDBTitle: spirochaeta thermophila x module - cbm64 - mutant g504a
2d2fd5a2



16.9 45
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
3c2mpnB_



12.4 23
PDB header:membrane protein
Chain: B: PDB Molecule:inner membrane protein ygap;
PDBTitle: 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
4c1cfgA_



11.4 50
PDB header:coagulation factor
Chain: A: PDB Molecule:coagulation factor viii;
PDBTitle: membrane-binding peptide from the c2 domain of factor viii2 forms an amphipathic structure as determined by nmr3 spectroscopy
5c6n0tA_



8.5 75
PDB header:ligase
Chain: A: PDB Molecule:trna ligase;
PDBTitle: trna ligase
6c2mpnA_



7.9 24
PDB header:membrane protein
Chain: A: PDB Molecule:inner membrane protein ygap;
PDBTitle: 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
7c2n5nA_



7.5 20
PDB header:dna binding protein
Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 4;
PDBTitle: structure of an n-terminal domain of chd4
8d1q0qa3



7.3 50
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Dihydrodipicolinate reductase-like
9c4uznA_



6.9 43
PDB header:hydrolase
Chain: A: PDB Molecule:endo-beta-1,4-glucanase (celulase b);
PDBTitle: the native structure of the family 46 carbohydrate-binding2 module (cbm46) of endo-beta-1,4-glucanase b (cel5b) from3 bacillus halodurans
10c5kqoA_



6.6 50
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from vibrio vulnificus
11d2o3bb1



6.6 50
Fold:Nuclease A inhibitor (NuiA)
Superfamily:Nuclease A inhibitor (NuiA)
Family:Nuclease A inhibitor (NuiA)
12c3au9A_



6.4 63
PDB header:isomerase/isomerase inhibitor
Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase;
PDBTitle: crystal structure of the quaternary complex-1 of an isomerase
13c2eghA_



6.1 50
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase;
PDBTitle: crystal structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase2 complexed with a magnesium ion, nadph and fosmidomycin
14d1a5ta1



5.9 24
Fold:post-AAA+ oligomerization domain-like
Superfamily:post-AAA+ oligomerization domain-like
Family:DNA polymerase III clamp loader subunits, C-terminal domain
15c2mpkA_



5.9 25
PDB header:transferase
Chain: A: PDB Molecule:chitin synthase 1;
PDBTitle: characterization and structure of the mit1 domain of a chitin synthase2 from the oomycete saprolegnia monoica
16c1ry3A_



5.7 47
PDB header:antibiotic
Chain: A: PDB Molecule:bacteriocin carnobacteriocin b2;
PDBTitle: nmr solution structure of the precursor for2 carnobacteriocin b2, an antimicrobial peptide from3 carnobacterium piscicola
17c6b3yA_



5.7 54
PDB header:transport protein
Chain: A: PDB Molecule:denn domain-containing protein 3;
PDBTitle: crystal structure of the ph-like domain from dennd3
18c3zfiB_



5.6 12
PDB header:transport protein
Chain: B: PDB Molecule:rap1a protein;
PDBTitle: rap1a protein (sma2260) from serratia marcescens
19d2lisa_



5.6 25
Fold:Fertilization protein
Superfamily:Fertilization protein
Family:Fertilization protein
20c2jo1A_



5.5 27
PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
21d2es7a1



not modelled 5.4 25
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:HyaE-like

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below