Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2624c_(-)_2950499_2951317
DateWed Aug 7 12:50:26 BST 2019
Unique Job IDc9459937c8dc0308
SequenceMSGRGEPTMK ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:53.434 Y:65.118 Z:42.012
Model (left) based on template c3loqA_
Top template information
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: the crystal structure of a universal stress protein from archaeoglobus2 fulgidus dsm 4304
Confidence and coverage
Confidence:100.0% Coverage: 94%
257 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3loqA_



100.0 19
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: the crystal structure of a universal stress protein from archaeoglobus2 fulgidus dsm 4304
2c2jaxA_



100.0 30
PDB header:protein binding
Chain: A: PDB Molecule:hypothetical protein tb31.7;
PDBTitle: universal stress protein rv2623 from mycobaterium2 tuberculosis
3c3mt0A_



100.0 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein pa1789;
PDBTitle: the crystal structure of a functionally unknown protein pa1789 from2 pseudomonas aeruginosa pao1
4c3ab8B_



100.0 16
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein ttha0350;
PDBTitle: crystal structure of the hypothetical tandem-type universal stress2 protein ttha0350 complexed with atps.
5c4r2jA_



100.0 16
PDB header:metal binding protein, unknown function
Chain: A: PDB Molecule:universal stress protein e;
PDBTitle: crystal structure of ydaa (universal stress protein e) from salmonella2 typhimurium
6c3olqA_



100.0 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:universal stress protein e;
PDBTitle: the crystal structure of a universal stress protein e from proteus2 mirabilis hi4320
7c3s3tD_



99.9 34
PDB header:chaperone
Chain: D: PDB Molecule:nucleotide-binding protein, universal stress protein uspa
PDBTitle: universal stress protein uspa from lactobacillus plantarum
8d2z3va1



99.8 24
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
9c3hgmD_



99.8 29
PDB header:signaling protein
Chain: D: PDB Molecule:universal stress protein tead;
PDBTitle: universal stress protein tead from the trap transporter teaabc of2 halomonas elongata
10c3fh0A_



99.8 31
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative universal stress protein kpn_01444;
PDBTitle: crystal structure of putative universal stress protein kpn_01444 -2 atpase
11c3dloC_



99.8 24
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:universal stress protein;
PDBTitle: structure of universal stress protein from archaeoglobus fulgidus
12c4wnyA_



99.8 23
PDB header:signaling protein
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of a protein from the universal stress protein2 family from burkholderia pseudomallei
13d1mjha_



99.8 29
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
14c5ahwC_



99.8 23
PDB header:signaling protein
Chain: C: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of universal stress protein msmeg_3811 in2 complex with camp
15d1tq8a_



99.8 32
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
16c4r2lB_



99.8 29
PDB header:unknown function
Chain: B: PDB Molecule:universal stress protein f;
PDBTitle: crystal structure of ynaf (universal stress protein f) from salmonella2 typhimurium
17c2pfsA_



99.7 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of universal stress protein from nitrosomonas2 europaea
18d2gm3a1



99.7 20
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
19d1jmva_



99.7 24
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
20c3idfA_



99.7 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:usp-like protein;
PDBTitle: the crystal structure of a usp-like protein from wolinella2 succinogenes to 2.0a
21c3fg9B_



not modelled 99.6 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein of universal stress protein uspa family;
PDBTitle: the crystal structure of an universal stress protein uspa2 family protein from lactobacillus plantarum wcfs1
22d1q77a_



not modelled 99.6 17
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
23c2dumD_



not modelled 99.5 23
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein ph0823;
PDBTitle: crystal structure of hypothetical protein, ph0823
24c2ejbA_



not modelled 85.7 21
PDB header:lyase
Chain: A: PDB Molecule:probable aromatic acid decarboxylase;
PDBTitle: crystal structure of phenylacrylic acid decarboxylase from2 aquifex aeolicus
25c3zquA_



not modelled 84.4 19
PDB header:lyase
Chain: A: PDB Molecule:probable aromatic acid decarboxylase;
PDBTitle: structure of a probable aromatic acid decarboxylase
26c4nzpA_



not modelled 76.8 9
PDB header:ligase
Chain: A: PDB Molecule:argininosuccinate synthase;
PDBTitle: the crystal structure of argininosuccinate synthase from campylobacter2 jejuni subsp. jejuni nctc 11168
27c3a2kB_



not modelled 74.8 14
PDB header:ligase/rna
Chain: B: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils complexed with trna
28c6qlgD_



not modelled 62.0 21
PDB header:transferase
Chain: D: PDB Molecule:flavin prenyltransferase pad1, mitochondrial;
PDBTitle: crystal structure of anubix (pada1) in complex with fmn and2 dimethylallyl pyrophosphate
29c3u7rB_



not modelled 60.6 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadph-dependent fmn reductase;
PDBTitle: ferb - flavoenzyme nad(p)h:(acceptor) oxidoreductase (ferb) from2 paracoccus denitrificans
30c6eoaA_



not modelled 60.5 21
PDB header:flavoprotein
Chain: A: PDB Molecule:phosphopantothenoylcysteine decarboxylase;
PDBTitle: crystal structure of hal3 from cryptococcus neoformans
31c5h75B_



not modelled 58.5 24
PDB header:lyase
Chain: B: PDB Molecule:mersacidin decarboxylase,immunoglobulin g-binding protein
PDBTitle: crystal structure of the mrsd-protein a fusion protein
32d1qzua_



not modelled 57.1 26
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
33d1g5qa_



not modelled 54.0 17
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
34c2p0yA_



not modelled 52.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein lp_0780;
PDBTitle: crystal structure of q88yi3_lacpl from lactobacillus plantarum.2 northeast structural genomics consortium target lpr6
35c4kpuB_



not modelled 52.3 4
PDB header:electron transport
Chain: B: PDB Molecule:electron transfer flavoprotein alpha/beta-subunit;
PDBTitle: electron transferring flavoprotein of acidaminococcus fermentans:2 towards a mechanism of flavin-based electron bifurcation
36c3qjgD_



not modelled 51.1 9
PDB header:oxidoreductase
Chain: D: PDB Molecule:epidermin biosynthesis protein epid;
PDBTitle: epidermin biosynthesis protein epid from staphylococcus aureus
37c4rheB_



not modelled 50.1 18
PDB header:lyase
Chain: B: PDB Molecule:3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
PDBTitle: crystal structure of ubix, an aromatic acid decarboxylase from the2 colwellia psychrerythraea 34h
38d2dbsa1



not modelled 48.5 25
Fold:TTHC002-like
Superfamily:TTHC002-like
Family:TTHC002-like
39c6jlsA_



not modelled 46.3 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:putative flavoprotein decarboxylase;
PDBTitle: crystal structure of fmn-dependent cysteine decarboxylases tvaf from2 thioviridamide biosynthesis
40d1sbza_



not modelled 44.0 24
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
41c5ow0B_



not modelled 42.9 20
PDB header:electron transport
Chain: B: PDB Molecule:electron transfer flavoprotein, beta subunit;
PDBTitle: crystal structure of an electron transfer flavoprotein from2 geobacillus metallireducens
42c3s40C_



not modelled 42.3 10
PDB header:transferase
Chain: C: PDB Molecule:diacylglycerol kinase;
PDBTitle: the crystal structure of a diacylglycerol kinases from bacillus2 anthracis str. sterne
43d1mvla_



not modelled 42.1 22
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
44c1mvlA_



not modelled 42.1 22
PDB header:lyase
Chain: A: PDB Molecule:ppc decarboxylase athal3a;
PDBTitle: ppc decarboxylase mutant c175s
45c5dldA_



not modelled 41.6 19
PDB header:isomerase
Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase;
PDBTitle: crystal structure of a udp-n-acetylglucosamine 2-epimerase from2 burkholderia vietnamiensis complexed with udp-glcnac and udp
46d1p3y1_



not modelled 40.8 24
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
47c5ol2E_



not modelled 40.3 17
PDB header:flavoprotein
Chain: E: PDB Molecule:electron transfer flavoprotein small subunit;
PDBTitle: the electron transferring flavoprotein/butyryl-coa dehydrogenase2 complex from clostridium difficile
48c3g40A_



not modelled 40.3 10
PDB header:transport protein
Chain: A: PDB Molecule:na-k-cl cotransporter;
PDBTitle: crystal structure of the cytoplasmic domain of a2 prokaryotic cation chloride cotransporter
49c3mcuF_



not modelled 40.1 26
PDB header:oxidoreductase
Chain: F: PDB Molecule:dipicolinate synthase, b chain;
PDBTitle: crystal structure of the dipicolinate synthase chain b from bacillus2 cereus. northeast structural genomics consortium target bcr215.
50c3crqA_



not modelled 38.9 19
PDB header:transferase
Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate
PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel
51c2ppvA_



not modelled 38.7 19
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein belonging to the upf0052 (se_0549) from2 staphylococcus epidermidis atcc 12228 at 2.00 a resolution
52c2e21A_



not modelled 35.1 5
PDB header:ligase
Chain: A: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils in a complex with amppnp from aquifex2 aeolicus.
53c1ni5A_



not modelled 35.0 16
PDB header:cell cycle
Chain: A: PDB Molecule:putative cell cycle protein mesj;
PDBTitle: structure of the mesj pp-atpase from escherichia coli
54c6jddA_



not modelled 34.6 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cypemycin cysteine dehydrogenase (decarboxylating);
PDBTitle: crystal structure of the cypemycin decarboxylase cypd.
55c3fozB_



not modelled 34.1 19
PDB header:transferase/rna
Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase;
PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe)
56c4iwmD_



not modelled 34.0 14
PDB header:unknown function
Chain: D: PDB Molecule:upf0135 protein mj0927;
PDBTitle: crystal structure of the conserved hypothetical protein mj0927 from2 methanocaldococcus jannaschii (in p21 form)
57c3lqkA_



not modelled 33.5 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:dipicolinate synthase subunit b;
PDBTitle: crystal structure of dipicolinate synthase subunit b from bacillus2 halodurans c
58c1dd9A_



not modelled 32.9 17
PDB header:transferase
Chain: A: PDB Molecule:dna primase;
PDBTitle: structure of the dnag catalytic core
59d1dd9a_



not modelled 32.9 17
Fold:DNA primase core
Superfamily:DNA primase core
Family:DNA primase DnaG catalytic core
60d2hy5b1



not modelled 32.1 8
Fold:DsrEFH-like
Superfamily:DsrEFH-like
Family:DsrEF-like
61d1p5dx1



not modelled 32.1 13
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
62c3umvB_



not modelled 32.0 21
PDB header:lyase
Chain: B: PDB Molecule:deoxyribodipyrimidine photo-lyase;
PDBTitle: eukaryotic class ii cpd photolyase structure reveals a basis for2 improved uv-tolerance in plants
63c1vl2C_



not modelled 31.6 6
PDB header:ligase
Chain: C: PDB Molecule:argininosuccinate synthase;
PDBTitle: crystal structure of argininosuccinate synthase (tm1780) from2 thermotoga maritima at 1.65 a resolution
64d2hzba1



not modelled 31.2 17
Fold:CofD-like
Superfamily:CofD-like
Family:CofD-like
65c3vrhA_



not modelled 31.0 7
PDB header:rna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein ph0300;
PDBTitle: crystal structure of ph0300
66c3c04A_



not modelled 28.4 13
PDB header:isomerase
Chain: A: PDB Molecule:phosphomannomutase/phosphoglucomutase;
PDBTitle: structure of the p368g mutant of pmm/pgm from p. aeruginosa
67c5z6vA_



not modelled 28.3 13
PDB header:protein transport
Chain: A: PDB Molecule:abc-type uncharacterized transport system periplasmic
PDBTitle: crystal structure of a substrate-binding protein from rhodothermus2 marinus
68d2j07a2



not modelled 28.2 7
Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
69c4l2iA_



not modelled 27.5 19
PDB header:electron transport
Chain: A: PDB Molecule:electron transfer flavoprotein alpha subunit;
PDBTitle: electron transferring flavoprotein of acidaminococcus fermentans:2 towards a mechanism of flavin-based electron bifurcation
70c4qg5D_



not modelled 26.9 21
PDB header:isomerase
Chain: D: PDB Molecule:putative phosphoglucomutase;
PDBTitle: crystal structure of phosphoglucomutase from leishmania major at 3.52 angstrom resolution
71d1xrsa_



not modelled 26.8 13
Fold:TIM beta/alpha-barrel
Superfamily:Cobalamin (vitamin B12)-dependent enzymes
Family:D-lysine 5,6-aminomutase alpha subunit, KamD
72c4hqnB_



not modelled 26.3 20
PDB header:cell adhesion
Chain: B: PDB Molecule:sporozoite surface protein 2;
PDBTitle: crystal structure of manganese-loaded plasmodium vivax trap protein
73d2fywa1



not modelled 25.9 29
Fold:NIF3 (NGG1p interacting factor 3)-like
Superfamily:NIF3 (NGG1p interacting factor 3)-like
Family:NIF3 (NGG1p interacting factor 3)-like
74d1nmpa_



not modelled 24.5 39
Fold:NIF3 (NGG1p interacting factor 3)-like
Superfamily:NIF3 (NGG1p interacting factor 3)-like
Family:NIF3 (NGG1p interacting factor 3)-like
75c5f4bB_



not modelled 24.3 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad(p)h dehydrogenase (quinone);
PDBTitle: structure of b. abortus wrba-related protein a (wrpa)
76c2yybA_



not modelled 23.6 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ttha1606;
PDBTitle: crystal structure of ttha1606 from thermus thermophilus hb8
77c2xrzA_



not modelled 23.3 9
PDB header:lyase/dna
Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase;
PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion
78d2d1pb1



not modelled 22.7 22
Fold:DsrEFH-like
Superfamily:DsrEFH-like
Family:DsrEF-like
79c2nydB_



not modelled 22.4 17
PDB header:unknown function
Chain: B: PDB Molecule:upf0135 protein sa1388;
PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388
80c2gpwC_



not modelled 21.8 14
PDB header:ligase
Chain: C: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli.
81c2c5sA_



not modelled 21.6 17
PDB header:rna-binding protein
Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii;
PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain
82c1kh2D_



not modelled 21.4 9
PDB header:ligase
Chain: D: PDB Molecule:argininosuccinate synthetase;
PDBTitle: crystal structure of thermus thermophilus hb8 argininosuccinate2 synthetase in complex with atp
83c5ol2D_



not modelled 20.9 11
PDB header:flavoprotein
Chain: D: PDB Molecule:electron transfer flavoprotein large subunit;
PDBTitle: the electron transferring flavoprotein/butyryl-coa dehydrogenase2 complex from clostridium difficile
84c3i42A_



not modelled 20.5 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like);
PDBTitle: structure of response regulator receiver domain (chey-like) from2 methylobacillus flagellatus
85c5bmpA_



not modelled 20.3 8
PDB header:isomerase
Chain: A: PDB Molecule:phosphoglucomutase;
PDBTitle: crystal structure of phosphoglucomutase from xanthomonas citri2 complexed with glucose-1-phosphate
86d1ni5a1



not modelled 20.1 16
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PP-loop ATPase
87d1m7ja3



not modelled 20.0 13
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:D-aminoacylase, catalytic domain
88c5gafi_



not modelled 19.9 6
PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l10;
PDBTitle: rnc in complex with srp
89d1t6t1_



not modelled 19.8 10
Fold:Toprim domain
Superfamily:Toprim domain
Family:Toprim domain
90c3g8rA_



not modelled 19.7 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e;
PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
91c3dzcA_



not modelled 19.7 14
PDB header:isomerase
Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase;
PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae.
92c3uw2A_



not modelled 19.5 15
PDB header:isomerase
Chain: A: PDB Molecule:phosphoglucomutase/phosphomannomutase family protein;
PDBTitle: x-ray crystal structure of phosphoglucomutase/phosphomannomutase2 family protein (bth_i1489)from burkholderia thailandensis
93d1to6a_



not modelled 19.4 19
Fold:Glycerate kinase I
Superfamily:Glycerate kinase I
Family:Glycerate kinase I
94c5ghaC_



not modelled 19.2 10
PDB header:transferase/transport protein
Chain: C: PDB Molecule:sulfur transferase ttua;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
95c2au3A_



not modelled 19.2 24
PDB header:transferase
Chain: A: PDB Molecule:dna primase;
PDBTitle: crystal structure of the aquifex aeolicus primase (zinc binding and2 rna polymerase domains)
96c1xuzA_



not modelled 19.2 21
PDB header:biosynthetic protein
Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac;
PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
97c3i3wB_



not modelled 18.1 18
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: structure of a phosphoglucosamine mutase from francisella tularensis
98d2c5sa1



not modelled 18.0 19
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ThiI-like
99c4okuA_



not modelled 18.0 16
PDB header:cell adhesion
Chain: A: PDB Molecule:micronemal protein mic2;
PDBTitle: structure of toxoplasma gondii promic2

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