Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2630_(-)_2956903_2957442
DateWed Aug 7 12:50:27 BST 2019
Unique Job ID50258ebf4dda48be
SequenceMLHRDDHINP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:46.220 Y:42.164 Z:70.687
Model (left) based on template c5yzlA_
Top template information
PDB header:chaperone
Chain: A: PDB Molecule:protein archease;
PDBTitle: crystal structure of human archease d178a
Confidence and coverage
Confidence:100.0% Coverage: 81%
145 residues ( 81% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5yzlA_



100.0 16
PDB header:chaperone
Chain: A: PDB Molecule:protein archease;
PDBTitle: crystal structure of human archease d178a
2d1jw3a_



100.0 19
Fold:MTH1598-like
Superfamily:MTH1598-like
Family:MTH1598-like
3c4n2pC_



100.0 16
PDB header:chaperone
Chain: C: PDB Molecule:protein archease;
PDBTitle: structure of archease from pyrococcus horikoshii
4d1j5ua_



100.0 16
Fold:MTH1598-like
Superfamily:MTH1598-like
Family:MTH1598-like
5c3gkuB_



88.0 15
PDB header:rna binding protein
Chain: B: PDB Molecule:probable rna-binding protein;
PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940
6c2yztA_



71.0 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ttha1756;
PDBTitle: crystal structure of uncharacterized conserved protein from thermus2 thermophilus hb8
7c6g1cV_



43.0 25
PDB header:antitoxin
Chain: V: PDB Molecule:antitoxin hicb;
PDBTitle: crystal structure of the n-terminal domain of burkholderia2 pseudomallei antitoxin hicb
8c5yrzC_



37.7 4
PDB header:antitoxin/hydrolase
Chain: C: PDB Molecule:hicb;
PDBTitle: toxin-antitoxin complex from streptococcus pneumoniae
9c6j7jA_



35.4 36
PDB header:transferase
Chain: A: PDB Molecule:pseudomonas aeruginosa earp;
PDBTitle: crystal structure of pseudomonas aeruginosa earp
10d1f2ri_



31.9 12
Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:CAD domain
11c4p7dA_



31.4 8
PDB header:toxin
Chain: A: PDB Molecule:antitoxin hicb3;
PDBTitle: antitoxin hicb3 crystal structure
12c5ubuC_



28.5 6
PDB header:hydrolase
Chain: C: PDB Molecule:putative acetamidase/formamidase;
PDBTitle: 2.75 angstrom resolution crystal structure of acetamidase from2 yersinia enterocolitica.
13d2f4la1



28.4 12
Fold:CUB-like
Superfamily:Acetamidase/Formamidase-like
Family:Acetamidase/Formamidase-like
14d1a9xa5



26.9 21
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
15c2wnmA_



26.8 14
PDB header:hydrolase
Chain: A: PDB Molecule:gene 2;
PDBTitle: solution structure of gp2
16d1w96c1



26.5 19
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
17c6g1nB_



26.1 21
PDB header:antitoxin
Chain: B: PDB Molecule:antitoxin hicb;
PDBTitle: crystal structure of the burkholderia pseudomallei antitoxin hicb
18d1k0wa_



25.3 19
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
19d1ulza1



24.5 19
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
20c2lmcA_



24.2 14
PDB header:transcription
Chain: A: PDB Molecule:bacterial rna polymerase inhibitor;
PDBTitle: structure of t7 transcription factor gp2-e. coli rnap jaw domain2 complex
21c2ii1A_



not modelled 20.9 12
PDB header:hydrolase
Chain: A: PDB Molecule:acetamidase;
PDBTitle: crystal structure of acetamidase (10172637) from bacillus halodurans2 at 1.95 a resolution
22c2eelA_



not modelled 19.2 18
PDB header:apoptosis
Chain: A: PDB Molecule:cell death activator cide-a;
PDBTitle: solution structure of the cide-n domain of human cell death2 activator cide-a
23c2ltsA_



not modelled 19.1 5
PDB header:rna binding protein
Chain: A: PDB Molecule:protein rde-4;
PDBTitle: solution structure of rde-4(150-235)
24d2b7ta1



not modelled 18.5 21
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD)
25d1w96a1



not modelled 17.2 19
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
26c1ibxB_



not modelled 17.1 10
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:chimera of igg binding protein g and dna
PDBTitle: nmr structure of dff40 and dff45 n-terminal domain complex
27d1ibxb_



not modelled 17.1 10
Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:CAD domain
28c4c2mK_



not modelled 16.5 23
PDB header:transcription
Chain: K: PDB Molecule:dna-directed rna polymerases i and iii subunit rpac2;
PDBTitle: structure of rna polymerase i at 2.8 a resolution
29c5xpcD_



not modelled 16.3 11
PDB header:apoptosis
Chain: D: PDB Molecule:dnaation factor-related protein 4;
PDBTitle: crystal structure of drep4 cide domain
30c3mjjD_



not modelled 15.7 18
PDB header:hydrolase
Chain: D: PDB Molecule:predicted acetamidase/formamidase;
PDBTitle: crystal structure analysis of a recombinant predicted2 acetamidase/formamidase from the thermophile thermoanaerobacter3 tengcongensis
31d2j9ga1



not modelled 15.6 17
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
32c5x51K_



not modelled 15.1 15
PDB header:transferase
Chain: K: PDB Molecule:rna polymerase ii subunit b12.5;
PDBTitle: rna polymerase ii from komagataella pastoris (type-3 crystal)
33d1d4ba_



not modelled 14.8 20
Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:CAD domain
34d1twfk_



not modelled 14.2 14
Fold:DCoH-like
Superfamily:RBP11-like subunits of RNA polymerase
Family:RBP11/RpoL
35c2kl7A_



not modelled 14.1 23
PDB header:signaling protein, structural protein
Chain: A: PDB Molecule:fibulin-4;
PDBTitle: solution nmr structure of the egf-like 1 domain of human2 fibulin-4. northeast structural genomics target hr6275
36c5cffE_



not modelled 14.0 8
PDB header:transcription/rna binding protein
Chain: E: PDB Molecule:staufen;
PDBTitle: crystal structure of miranda/staufen dsrbd5 complex
37d1e4cp_



not modelled 13.4 22
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
38c4c24A_



not modelled 13.4 17
PDB header:lyase
Chain: A: PDB Molecule:l-fuculose phosphate aldolase;
PDBTitle: l-fuculose 1-phosphate aldolase
39c2irpA_



not modelled 13.2 8
PDB header:lyase
Chain: A: PDB Molecule:putative aldolase class 2 protein aq_1979;
PDBTitle: crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979)2 from aquifex aeolicus vf5
40d1lqsl_



not modelled 12.0 45
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
41c5flmK_



not modelled 11.7 18
PDB header:transcription
Chain: K: PDB Molecule:dna-directed rna polymerase ii subunit rpb11;
PDBTitle: structure of transcribing mammalian rna polymerase ii
42d1pvta_



not modelled 11.0 6
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
43d2gdta1



not modelled 10.9 9
Fold:SARS Nsp1-like
Superfamily:SARS Nsp1-like
Family:SARS Nsp1-like
44c6btdA_



not modelled 10.7 22
PDB header:lyase
Chain: A: PDB Molecule:fuculose phosphate aldolase;
PDBTitle: crystal structure of deoxyribose-phosphate aldolase from bacillus2 thuringiensis involved in dispatching the ubiquitous radical sam3 enzyme byproduct 5-deoxyribose
45d1vlka_



not modelled 10.5 18
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
46c3ju3A_



not modelled 10.4 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable 2-oxoacid ferredoxin oxidoreductase, alpha chain;
PDBTitle: crystal structure of alpha chain of probable 2-oxoacid ferredoxin2 oxidoreductase from thermoplasma acidophilum
47c5gzbA_



not modelled 10.0 20
PDB header:transcription/dna
Chain: A: PDB Molecule:transcriptional enhancer factor tef-3;
PDBTitle: crystal structure of transcription factor tead4 in complex with m-cat2 dna
48d1lk3a_



not modelled 9.9 18
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
49c2opiB_



not modelled 9.7 11
PDB header:lyase
Chain: B: PDB Molecule:l-fuculose-1-phosphate aldolase;
PDBTitle: crystal structure of l-fuculose-1-phosphate aldolase from bacteroides2 thetaiotaomicron
50d2ilka_



not modelled 9.2 18
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
51d1vdha_



not modelled 9.1 27
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Chlorite dismutase-like
52c2hzdA_



not modelled 9.0 20
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional enhancer factor tef-1;
PDBTitle: nmr structure of the dna-binding tea domain and insights2 into tef-1 function
53c3h0gK_



not modelled 8.9 12
PDB header:transcription
Chain: K: PDB Molecule:dna-directed rna polymerase ii subunit rpb11;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
54d1gpua3



not modelled 8.5 13
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
55c2z7bA_



not modelled 8.4 6
PDB header:lyase
Chain: A: PDB Molecule:mlr6791 protein;
PDBTitle: crystal structure of mesorhizobium loti 3-hydroxy-2-methylpyridine-4,2 5-dicarboxylate decarboxylase
56c5h3iC_



not modelled 8.3 6
PDB header:lipid binding protein
Chain: C: PDB Molecule:putative acyl-coa-binding protein;
PDBTitle: crystal structure of oryza sativa acyl-coa-binding protein 2
57c5wxkA_



not modelled 8.1 17
PDB header:transferase
Chain: A: PDB Molecule:earp;
PDBTitle: earp bound with domain i of ef-p
58c3ctvA_



not modelled 8.1 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase;
PDBTitle: crystal structure of central domain of 3-hydroxyacyl-coa dehydrogenase2 from archaeoglobus fulgidus
59d1ojra_



not modelled 8.1 19
Fold:AraD/HMP-PK domain-like
Superfamily:AraD/HMP-PK domain-like
Family:AraD-like aldolase/epimerase
60c3m4rA_



not modelled 8.0 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the n-terminal class ii aldolase domain of a conserved2 protein from thermoplasma acidophilum
61c3n6rK_



not modelled 7.8 26
PDB header:ligase
Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
62c3u9sE_



not modelled 7.8 22
PDB header:ligase
Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
63c3ocrA_



not modelled 7.8 9
PDB header:lyase
Chain: A: PDB Molecule:class ii aldolase/adducin domain protein;
PDBTitle: crystal structure of aldolase ii superfamily protein from pseudomonas2 syringae
64c3ouzA_



not modelled 7.7 19
PDB header:ligase
Chain: A: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni
65d2r8oa3



not modelled 7.5 10
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
66c4d2kB_



not modelled 7.5 6
PDB header:apoptosis
Chain: B: PDB Molecule:drep2;
PDBTitle: crystal structure of drep2 cide domain
67d1uila_



not modelled 7.4 12
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD)
68c3h7uA_



not modelled 7.4 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldo-keto reductase;
PDBTitle: crystal structure of the plant stress-response enzyme akr4c9
69c3u9sI_



not modelled 7.0 22
PDB header:ligase
Chain: I: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
70d1itza3



not modelled 6.6 13
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
71c3x2dM_



not modelled 6.6 25
PDB header:viral protein/immune system
Chain: M: PDB Molecule:envelope glycoprotein gp1;
PDBTitle: crystal structure of marburg virus gp in complex with the human2 survivor antibody mr78
72c2lrsA_



not modelled 6.5 13
PDB header:hydrolase
Chain: A: PDB Molecule:endoribonuclease dicer homolog 1;
PDBTitle: the second dsrbd domain from a. thaliana dicer-like 1
73c6d9mA_



not modelled 6.5 12
PDB header:hydrolase
Chain: A: PDB Molecule:fusion protein of endolysin,response receiver sensor
PDBTitle: t4-lysozyme fusion to geobacter ggdef
74c4xxfA_



not modelled 6.4 11
PDB header:lyase
Chain: A: PDB Molecule:fuculose-1-phosphate aldolase;
PDBTitle: l-fuculose 1-phosphate aldolase from glaciozyma antarctica pi12
75c4m6rA_



not modelled 6.3 13
PDB header:lyase
Chain: A: PDB Molecule:methylthioribulose-1-phosphate dehydratase;
PDBTitle: structural and biochemical basis for the inhibition of cell death by2 apip, a methionine salvage enzyme
76c5ks8B_



not modelled 6.1 9
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase subunit alpha;
PDBTitle: crystal structure of two-subunit pyruvate carboxylase from2 methylobacillus flagellatus
77d1r9ja3



not modelled 5.9 17
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
78c6djyB_



not modelled 5.9 13
PDB header:virus
Chain: B: PDB Molecule:major capsid protein;
PDBTitle: fako virus
79c4dkkA_



not modelled 5.9 15
PDB header:rna binding protein
Chain: A: PDB Molecule:double-stranded rna-binding protein staufen homolog 1;
PDBTitle: the x-ray crystal structure of the human stau1 ssm-'rbd'5 domain-2 swapped dimer
80c1ulzA_



not modelled 5.8 26
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain;
PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
81c2yt4A_



not modelled 5.8 10
PDB header:rna binding protein
Chain: A: PDB Molecule:protein dgcr8;
PDBTitle: crystal structure of human dgcr8 core
82c2ltrA_



not modelled 5.7 6
PDB header:rna binding protein
Chain: A: PDB Molecule:protein rde-4;
PDBTitle: solution structure of rde-4(32-136)
83c2gpwC_



not modelled 5.7 18
PDB header:ligase
Chain: C: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli.
84c3vxgA_



not modelled 5.7 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:conjugated polyketone reductase c2;
PDBTitle: crystal structure of conjugated polyketone reductase c2 from candida2 parapsilosis
85d1t0tv_



not modelled 5.6 17
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Chlorite dismutase-like
86c4dapA_



not modelled 5.5 13
PDB header:dna binding protein
Chain: A: PDB Molecule:sugar fermentation stimulation protein a;
PDBTitle: the structure of escherichia coli sfsa
87d1hmca_



not modelled 5.4 29
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Short-chain cytokines
88c1yywB_



not modelled 5.4 6
PDB header:hydrolase/rna
Chain: B: PDB Molecule:ribonuclease iii;
PDBTitle: crystal structure of rnase iii from aquifex aeolicus2 complexed with double stranded rna at 2.8-angstrom3 resolution
89d1b9wa1



not modelled 5.3 25
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:EGF/Laminin
Family:Merozoite surface protein 1 (MSP-1)
90c3wg6C_



not modelled 5.2 31
PDB header:oxidoreductase
Chain: C: PDB Molecule:conjugated polyketone reductase c1;
PDBTitle: crystal structure of conjugated polyketone reductase c1 from candida2 parapsilosis complexed with nadph
91c4ikgA_



not modelled 5.2 9
PDB header:apoptosis
Chain: A: PDB Molecule:cell death activator cide-3;
PDBTitle: crystal structure of cell death-inducing dffa-like effector c
92c1w96B_



not modelled 5.2 19
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase;
PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a
93d1n1ia1



not modelled 5.2 21
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:EGF/Laminin
Family:Merozoite surface protein 1 (MSP-1)
94c5mlkB_



not modelled 5.2 13
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: biotin dependent carboxylase acca3 dimer from mycobacterium2 tuberculosis (rv3285)
95d1ob1c1



not modelled 5.1 21
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:EGF/Laminin
Family:Merozoite surface protein 1 (MSP-1)
96c3mtkA_



not modelled 5.1 8
PDB header:transferase
Chain: A: PDB Molecule:diguanylate cyclase/phosphodiesterase;
PDBTitle: x-ray structure of diguanylate cyclase/phosphodiesterase from2 caldicellulosiruptor saccharolyticus, northeast structural genomics3 consortium target clr27c

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