Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2637_(dedA)_2963596_2964252
DateWed Aug 7 12:50:28 BST 2019
Unique Job ID833718106fc8cbfa
SequenceMDVEALLQSI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.034 Y:30.694 Z:60.129
Model (left) based on template c4j05A_
Top template information
PDB header:transport protein
Chain: A: PDB Molecule:phosphate transporter;
PDBTitle: crystal structure of a eukaryotic phosphate transporter
Confidence and coverage
Confidence: 70.2% Coverage: 47%
102 residues ( 47% of your sequence) have been modelled with 70.2% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4j05A_



70.2 13
PDB header:transport protein
Chain: A: PDB Molecule:phosphate transporter;
PDBTitle: crystal structure of a eukaryotic phosphate transporter
2c4huqS_



64.7 15
PDB header:hydrolase
Chain: S: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a transporter
3c5a1sB_



47.4 15
PDB header:transport protein
Chain: B: PDB Molecule:citrate-sodium symporter;
PDBTitle: crystal structure of the sodium-dependent citrate symporter secits2 form salmonella enterica.
4c3qnqD_



31.8 5
PDB header:membrane protein, transport protein
Chain: D: PDB Molecule:pts system, cellobiose-specific iic component;
PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system
5c6hwhX_



27.0 9
PDB header:electron transport
Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 4;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
6c2kncA_



26.9 5
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
7c4djiA_



26.7 10
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
8c4z7fD_



26.1 11
PDB header:transport protein
Chain: D: PDB Molecule:folate ecf transporter;
PDBTitle: crystal structure of folt bound with folic acid
9c2bbjB_



24.7 21
PDB header:metal transport/membrane protein
Chain: B: PDB Molecule:divalent cation transport-related protein;
PDBTitle: crystal structure of the cora mg2+ transporter
10c2n28A_



21.3 26
PDB header:viral protein
Chain: A: PDB Molecule:protein vpu;
PDBTitle: solid-state nmr structure of vpu
11c2w8aC_



14.2 18
PDB header:membrane protein
Chain: C: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate
12c5d7tC_



13.7 16
PDB header:transport protein
Chain: C: PDB Molecule:s-component for folate;
PDBTitle: folate ecf transporter: apo state
13d1fftb2



12.9 8
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
14c6jnyA_



12.8 10
PDB header:transcription
Chain: A: PDB Molecule:antiterminator q protein;
PDBTitle: crystal structure of bacteriophage 21 q protein
15c6iu3A_



12.6 15
PDB header:metal transport
Chain: A: PDB Molecule:vit1;
PDBTitle: crystal structure of iron transporter vit1 with zinc ions
16c5u1dB_



10.0 9
PDB header:transport protein
Chain: B: PDB Molecule:antigen peptide transporter 2;
PDBTitle: cryo-em structure of the human tap atp-binding cassette transporter
17c4hzuS_



7.2 10
PDB header:hydrolase, transport protein
Chain: S: PDB Molecule:predicted membrane protein;
PDBTitle: structure of a bacterial energy-coupling factor transporter
18c4ainB_



7.2 19
PDB header:membrane protein
Chain: B: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of betp with asymmetric protomers.
19c3qf4A_



7.0 9
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter, atp-binding protein;
PDBTitle: crystal structure of a heterodimeric abc transporter in its inward-2 facing conformation
20c2momB_



6.2 24
PDB header:membrane protein
Chain: B: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
21c2momC_



not modelled 6.2 24
PDB header:membrane protein
Chain: C: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
22c2xq2A_



not modelled 5.9 12
PDB header:transport protein
Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: structure of the k294a mutant of vsglt
23c3njcA_



not modelled 5.8 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:yslb protein;
PDBTitle: crystal structure of the yslb protein from bacillus subtilis.2 northeast structural genomics consortium target sr460.
24c2yevB_



not modelled 5.8 8
PDB header:electron transport
Chain: B: PDB Molecule:cytochrome c oxidase subunit 2;
PDBTitle: structure of caa3-type cytochrome oxidase
25c4px7A_



not modelled 5.7 15
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatidylglycerophosphatase;
PDBTitle: crystal structure of lipid phosphatase e. coli pgpb
26c1iijA_



not modelled 5.4 13
PDB header:signaling protein
Chain: A: PDB Molecule:erbb-2 receptor protein-tyrosine kinase;
PDBTitle: solution structure of the neu/erbb-2 membrane spanning2 segment
27c6hwhL_



not modelled 5.3 4
PDB header:electron transport
Chain: L: PDB Molecule:cytochrome c oxidase subunit 2;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below