1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		L	S	S	I	L	F	R	T	A	E	L	R	P	G	E	G	R	T	V	Y	G	V	I	V	P	Y	G	E	V	T	T	V	R	D	L	D	G	E	F	R	E	M	F	A	P	G	A	F	R	R	S	I	A	E	R	G	H	K	V	K
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?			?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		L	L	V	S	H	D	A	R	T	R	Y	P	V	G	R	A	V	E	L	R	E	E	P	H	G	L	F	G	A	F	E	L	A	N	T	P	D	G	D	E	A	L	A	N	V	K	A	G	V	V	D	A	F	S	V	G	F	R	P	I
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Sequence		R	D	R	R	E	G	D	V	I	V	R	V	E	A	A	L	L	E	V	S	L	T	G	V	P	A	Y	L	G	A	Q	I	A	G	V	R	A	E	S	L	A	V	V	S	R	S	L	A	E	A	R	L	A	L	M	D	W
Secondary structure
SS confidence
Disorder																																				?	?	?	?	?	?	?	?	?											?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 15%) Alpha helix ( 19%) Beta strand ( 49%)

Rank Aligned region

PDB 2pbk chain A domain 1 Region: 15 - 105 Aligned: 82 Modelled: 91 Confidence: 93.9% Identity: 17% Fold: Herpes virus serine proteinase, assemblin Superfamily: Herpes virus serine proteinase, assemblin Family: Herpes virus serine proteinase, assemblin Phyre2 PDB 1o6e chain A Region: 19 - 93 Aligned: 66 Modelled: 75 Confidence: 93.1% Identity: 23% Fold: Herpes virus serine proteinase, assemblin Superfamily: Herpes virus serine proteinase, assemblin Family: Herpes virus serine proteinase, assemblin Phyre2 PDB 1ieg chain A Region: 19 - 105 Aligned: 74 Modelled: 87 Confidence: 92.7% Identity: 16% Fold: Herpes virus serine proteinase, assemblin Superfamily: Herpes virus serine proteinase, assemblin Family: Herpes virus serine proteinase, assemblin Phyre2 PDB 1vzv chain A Region: 15 - 112 Aligned: 86 Modelled: 98 Confidence: 90.3% Identity: 17% Fold: Herpes virus serine proteinase, assemblin Superfamily: Herpes virus serine proteinase, assemblin Family: Herpes virus serine proteinase, assemblin Phyre2 PDB 3njq chain B Region: 22 - 105 Aligned: 78 Modelled: 84 Confidence: 88.5% Identity: 17% PDB header:viral protein/inhibitor Chain: B: PDB Molecule:orf 17; PDBTitle: crystal structure of kaposi's sarcoma-associated herpesvirus protease2 in complex with dimer disruptor Phyre2 PDB 4cx8 chain B Region: 19 - 114 Aligned: 78 Modelled: 81 Confidence: 88.1% Identity: 14% PDB header:viral protein Chain: B: PDB Molecule:pseudorabies virus protease; PDBTitle: monomeric pseudorabies virus protease pul26n at 2.5 a resolution Phyre2 PDB 1at3 chain A Region: 22 - 110 Aligned: 83 Modelled: 89 Confidence: 86.7% Identity: 18% Fold: Herpes virus serine proteinase, assemblin Superfamily: Herpes virus serine proteinase, assemblin Family: Herpes virus serine proteinase, assemblin Phyre2 PDB 1jq6 chain A Region: 19 - 112 Aligned: 71 Modelled: 79 Confidence: 64.3% Identity: 18% Fold: Herpes virus serine proteinase, assemblin Superfamily: Herpes virus serine proteinase, assemblin Family: Herpes virus serine proteinase, assemblin Phyre2 PDB 4oy2 chain D Region: 88 - 159 Aligned: 63 Modelled: 68 Confidence: 56.1% Identity: 11% PDB header:transcription Chain: D: PDB Molecule:transcription initiation factor tfiid subunit 7; PDBTitle: crystal structure of taf1-taf7, a tfiid subcomplex Phyre2 PDB 5jbl chain A Region: 16 - 114 Aligned: 95 Modelled: 99 Confidence: 51.8% Identity: 14% PDB header:hydrolase Chain: A: PDB Molecule:prohead core protein protease; PDBTitle: structure of the bacteriophage t4 capsid assembly protease, gp21. Phyre2 PDB 2ed6 chain A domain 1 Region: 1 - 46 Aligned: 43 Modelled: 46 Confidence: 44.6% Identity: 16% Fold: WSSV envelope protein-like Superfamily: WSSV envelope protein-like Family: WSSV envelope protein-like Phyre2 PDB 4x8r chain B Region: 48 - 113 Aligned: 64 Modelled: 66 Confidence: 11.2% Identity: 13% PDB header:solute-binding protein Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodobacter sphaeroides (rsph17029_2138, target efi-510205) with3 bound glucuronate Phyre2 PDB 5ur2 chain C Region: 138 - 177 Aligned: 40 Modelled: 40 Confidence: 10.6% Identity: 10% PDB header:oxidoreductase Chain: C: PDB Molecule:bifunctional protein puta; PDBTitle: crystal structure of proline utilization a (puta) from bdellovibrio2 bacteriovorus inactivated by n-propargylglycine Phyre2 PDB 4rgw chain B Region: 88 - 159 Aligned: 65 Modelled: 72 Confidence: 8.5% Identity: 15% PDB header:transferase/transcription Chain: B: PDB Molecule:transcription initiation factor tfiid subunit 7; PDBTitle: crystal structure of a taf1-taf7 complex in human transcription factor2 iid Phyre2 PDB 4idm chain A Region: 142 - 177 Aligned: 36 Modelled: 36 Confidence: 8.2% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:delta-1-pyrroline-5-carboxylate dehydrogenase; PDBTitle: crystal structure of the delta-pyrroline-5-carboxylate dehydrogenase2 from mycobacterium tuberculosis Phyre2 PDB 2m4v chain A Region: 105 - 149 Aligned: 45 Modelled: 45 Confidence: 6.4% Identity: 16% PDB header:transcription Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: mycobacterium tuberculosis rna polymerase binding protein a (rbpa) and2 its interactions with sigma factors Phyre2 PDB 2hje chain A domain 1 Region: 1 - 66 Aligned: 55 Modelled: 66 Confidence: 5.5% Identity: 15% Fold: Profilin-like Superfamily: Sensory domain-like Family: LuxQ-periplasmic domain-like Phyre2 PDB 3cax chain A Region: 135 - 177 Aligned: 42 Modelled: 43 Confidence: 5.5% Identity: 12% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pf0695; PDBTitle: crystal structure of uncharacterized protein pf0695 Phyre2 PDB 3m86 chain B Region: 112 - 145 Aligned: 34 Modelled: 34 Confidence: 5.2% Identity: 9% PDB header:protein binding Chain: B: PDB Molecule:amoebiasin-2; PDBTitle: crystal structure of the cysteine protease inhibitor, ehicp2, from2 entamoeba histolytica Phyre2 1 d2pbka1 2 d1o6ea_ 3 d1iega_ 4 d1vzva_ 5 c3njqB_ 6 c4cx8B_ 7 d1at3a_ 8 d1jq6a_ 9 c4oy2D_ 10 c5jblA_ 11 d2ed6a1 12 c4x8rB_ 13 c5ur2C_ 14 c4rgwB_ 15 c4idmA_ 16 c2m4vA_ 17 d2hjea1 18 c3caxA_ 19 c3m86B_