Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2658c_(-)_2979336_2979698
DateWed Aug 7 12:50:30 BST 2019
Unique Job IDb4e38f24ef912a78
SequenceMADAVKYVVM ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:13.013 Y:23.358 Z:16.655
Model (left) based on template d1wkta_
Top template information
Fold:gamma-Crystallin-like
Superfamily:gamma-Crystallin-like
Family:Yeast killer toxin
Confidence and coverage
Confidence: 17.3% Coverage: 10%
12 residues ( 10% of your sequence) have been modelled with 17.3% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1wkta_



17.3 58
Fold:gamma-Crystallin-like
Superfamily:gamma-Crystallin-like
Family:Yeast killer toxin
2c2v1nA_



17.0 33
PDB header:nuclear protein
Chain: A: PDB Molecule:protein kin homolog;
PDBTitle: solution structure of the region 51-160 of human kin172 reveals a winged helix fold
3c2ro5B_



16.7 67
PDB header:transcription
Chain: B: PDB Molecule:stage v sporulation protein t;
PDBTitle: rdc-refined solution structure of the n-terminal dna recognition2 domain of the bacillus subtilis transition-state regulator spovt
4c4g0rA_



14.5 16
PDB header:virus/dna
Chain: A: PDB Molecule:capsid protein vp1;
PDBTitle: structural characterization of h-1 parvovirus: comparison of2 infectious virions to replication defective particles
5c4hffA_



12.2 21
PDB header:hydrolase
Chain: A: PDB Molecule:putative cytoplasmic protein;
PDBTitle: crystal structure of the type vi effector-immunity complex tae4-tai42 from salmonella typhimurium
6c6g5iy_



11.9 24
PDB header:ribosome
Chain: Y: PDB Molecule:40s ribosomal protein s24;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state r
7c5yhkB_



11.2 50
PDB header:metal binding protein
Chain: B: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: crystal structure of acetolactate decarboxylase from enterbacter2 aerogenes
8c5yhoA_



10.2 50
PDB header:metal binding protein
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: crystal structure of acetolactate decarboxylase from enterobacter2 cloacae
9c3kyzA_



9.6 20
PDB header:transferase
Chain: A: PDB Molecule:sensor protein pfes;
PDBTitle: the crystal structure of the sensor domain of two-component2 sensor pfes from pseudomonas aeruginosa pa01
10d1rooa_



9.6 43
Fold:Crisp domain-like
Superfamily:Crisp domain-like
Family:Sea anemone toxin k
11c4bt7A_



9.4 33
PDB header:lyase
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: acetolactate decarboxylase with a bound phosphate ion
12c2lcqA_



9.1 23
PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
13d2oola2



8.4 67
Fold:Profilin-like
Superfamily:PYP-like sensor domain (PAS domain)
Family:BphP N-terminal domain-like
14d1bg1a3



8.4 21
Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
15c6ig0B_



8.4 46
PDB header:rna binding protein
Chain: B: PDB Molecule:type iii-a crispr-associated ramp protein csm4;
PDBTitle: type iii-a csm complex, cryo-em structure of csm-ctr1, atp bound
16c4ghjA_



8.0 37
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: 1.75 angstrom crystal structure of transcriptional regulator ftom2 vibrio vulnificus.
17c3kieF_



7.7 27
PDB header:virus
Chain: F: PDB Molecule:capsid protein vp1;
PDBTitle: crystal structure of adeno-associated virus serotype 3b
18c2w1tB_



7.3 54
PDB header:transcription
Chain: B: PDB Molecule:stage v sporulation protein t;
PDBTitle: crystal structure of b. subtilis spovt
19c5xneA_



7.3 50
PDB header:lyase
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: x-ray crystal structure of alpha-acetolactate decarboxylase from2 bacillus subtilis strain 168
20c5zkeA_



7.2 58
PDB header:ligase
Chain: A: PDB Molecule:aminoacyl trna synthetase complex-interacting
PDBTitle: crystal structure of n-terminal domain of plasmodium vivax p43 in2 space group p212121
21c3nttA_



not modelled 7.1 17
PDB header:virus
Chain: A: PDB Molecule:capsid protein;
PDBTitle: structural insights of adeno-associated virus 5. a gene therapy vector2 for cystic fibrosis
22c2n6bA_



not modelled 6.9 58
PDB header:toxin
Chain: A: PDB Molecule:hui1;
PDBTitle: nmr structure of the de-novo toxin hui1
23c4bi3B_



not modelled 6.6 24
PDB header:toxin
Chain: B: PDB Molecule:ssp1;
PDBTitle: structure and function of amidase toxin - antitoxin2 combinations associated with the type vi secretion system3 of serratia marcescens.
24d2cona1



not modelled 6.6 31
Fold:Rubredoxin-like
Superfamily:NOB1 zinc finger-like
Family:NOB1 zinc finger-like
25c1l2yA_



not modelled 6.4 43
PDB header:de novo protein
Chain: A: PDB Molecule:tc5b;
PDBTitle: nmr structure of trp-cage miniprotein construct tc5b
26d1lp3a_



not modelled 6.3 27
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Parvoviridae-like VP
27d1xv2a_



not modelled 6.2 57
Fold:AF0104/ALDC/Ptd012-like
Superfamily:AF0104/ALDC/Ptd012-like
Family:Alpha-acetolactate decarboxylase-like
28d1lqsl_



not modelled 6.0 26
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
29c5xvnM_



not modelled 5.9 44
PDB header:immune system
Chain: M: PDB Molecule:crispr-associated endoribonuclease cas2;
PDBTitle: e. far cas1-cas2/prespacer binary complex
30c3ro2B_



not modelled 5.9 55
PDB header:protein binding
Chain: B: PDB Molecule:peptide of nuclear mitotic apparatus protein 1;
PDBTitle: structures of the lgn/numa complex
31c4gxbA_



not modelled 5.9 21
PDB header:protein transport/cell adhesion
Chain: A: PDB Molecule:sorting nexin-17;
PDBTitle: structure of the snx17 atypical ferm domain bound to the npxy motif of2 p-selectin
32c3wtfB_



not modelled 5.8 15
PDB header:immune system
Chain: B: PDB Molecule:uncharacterized protein c9orf142;
PDBTitle: structure of paxx
33d2o9ca2



not modelled 5.7 67
Fold:Profilin-like
Superfamily:PYP-like sensor domain (PAS domain)
Family:BphP N-terminal domain-like
34c4qc8A_



not modelled 5.7 23
PDB header:virus
Chain: A: PDB Molecule:vp2;
PDBTitle: structural annotation of pathogenic bovine parvovirus-1
35c1puoA_



not modelled 5.5 20
PDB header:allergen
Chain: A: PDB Molecule:major allergen i polypeptide, fused chain 2, chain 1;
PDBTitle: crystal structure of fel d 1- the major cat allergen
36c3jvfC_



not modelled 5.5 37
PDB header:signaling protein / cytokine
Chain: C: PDB Molecule:interleukin-17 receptor a;
PDBTitle: crystal structure of an interleukin-17 receptor complex
37d1foea2



not modelled 5.4 24
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
38c5vgbA_



not modelled 5.2 22
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:crispr-associated endonuclease cas9;
PDBTitle: crystal structure of nmecas9 hnh domain bound to anti-crispr acriic1
39c5zmmD_



not modelled 5.2 48
PDB header:dna binding protein
Chain: D: PDB Molecule:uncharacterized protein mcra;
PDBTitle: structure of the type iv phosphorothioation-dependent restriction2 endonuclease scomcra
40c2v4xA_



not modelled 5.1 29
PDB header:viral protein
Chain: A: PDB Molecule:capsid protein p27;
PDBTitle: crystal structure of jaagsiekte sheep retrovirus capsid n-2 terminal domain

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