Phyre 2 Results for RVBD2660c_(-)_2980973

Email	mdejesus@rockefeller.edu
Description	RVBD2660c_(-)_2980973_2981200
Date	Wed Aug 7 12:50:31 BST 2019
Unique Job ID	5133902153ef617a
Sequence	VIAGVDQALA ... Download FASTA
Job Type	normal
Job Expiry

Summary

Top model

Image coloured by rainbow N → C terminus

Model dimensions (Å):

X:31.929 Y:29.415 Z:23.601

Model (left) based on template c3eo6B_

Top template information

PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein of unknown function (duf1255);
PDBTitle: crystal structure of protein of unknown function (duf1255) (afe_2634)2 from acidithiobacillus ferrooxidans ncib8455 at 0.97 a resolution

Confidence and coverage

Confidence:

18.1%

Coverage:

48%

36 residues ( 48% of your sequence) have been modelled with 18.1% confidence by the single highest scoring template.

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3D viewing

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Sequence analysis

Download FASTA version

Secondary structure and disorder prediction [Show]

Domain analysis [Show]

Rank Aligned region

PDB 3eo6 chain B

3D model

Region: 39 - 74
Aligned: 36
Modelled: 36
Confidence: 18.1%
Identity: 22%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein of unknown function (duf1255);
PDBTitle: crystal structure of protein of unknown function (duf1255) (afe_2634)2 from acidithiobacillus ferrooxidans ncib8455 at 0.97 a resolution

Phyre2

PDB 2oyz chain A domain 1

3D model

Region: 26 - 74
Aligned: 49
Modelled: 49
Confidence: 13.0%
Identity: 16%
Fold: Double-stranded beta-helix
Superfamily: RmlC-like cupins
Family: VPA0057-like

Phyre2

PDB 3hqx chain A

Region: 24 - 74
Aligned: 51
Modelled: 51
Confidence: 13.0%
Identity: 24%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0345 protein aciad0356;
PDBTitle: crystal structure of protein of unknown function (duf1255,pf06865)2 from acinetobacter sp. adp1

Phyre2

PDB 5fx0 chain A

3D model

Region: 56 - 74
Aligned: 19
Modelled: 19
Confidence: 11.7%
Identity: 21%
PDB header:cell adhesion
Chain: A: PDB Molecule:calcium binding protein;
PDBTitle: fasciola hepatica calcium binding protein fhcabp2: structure of the2 dynein light chain-like domain. p6422 native.

Phyre2

PDB 1t6a chain A

3D model

Region: 25 - 49
Aligned: 25
Modelled: 23
Confidence: 9.6%
Identity: 20%
Fold: TBP-like
Superfamily: Rbstp2229 protein
Family: Rbstp2229 protein

Phyre2

PDB 5x2d chain A

Region: 56 - 74
Aligned: 19
Modelled: 19
Confidence: 6.1%
Identity: 26%
PDB header:cell adhesion
Chain: A: PDB Molecule:tegumental protein 20.8 kda;
PDBTitle: crystal structure of dlc like domain of cstal3 (83-177aa)

Phyre2

PDB 1n0u chain A domain 1

3D model

Region: 23 - 75
Aligned: 53
Modelled: 53
Confidence: 5.8%
Identity: 21%
Fold: Reductase/isomerase/elongation factor common domain
Superfamily: Translation proteins
Family: Elongation factors

Phyre2

PDB 2dbo chain A

Region: 35 - 56
Aligned: 22
Modelled: 22
Confidence: 5.2%
Identity: 32%
PDB header:hydrolase
Chain: A: PDB Molecule:d-tyrosyl-trna(tyr) deacylase;
PDBTitle: crystal structure of d-tyr-trna(tyr) deacylase from aquifex aeolicus

Phyre2

PDB 5vaq chain C

3D model

Region: 39 - 56
Aligned: 14
Modelled: 18
Confidence: 5.1%
Identity: 57%
PDB header:signaling protein
Chain: C: PDB Molecule:fibroblast growth factor 21;
PDBTitle: crystal structure of beta-klotho in complex with fgf21ct

Phyre2

1
c3eo6B_

2
d2oyza1

3
c3hqxA_

4
c5fx0A_

5
d1t6aa_

6
c5x2dA_

7
d1n0ua1

8
c2dboA_

9
c5vaqC_