Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2661c_(-)_2981197_2981586
DateWed Aug 7 12:50:31 BST 2019
Unique Job IDe73a471bb00384c7
SequenceMRARSDAGGQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:18.455 Y:22.709 Z:11.838
Model (left) based on template c2pd0D_
Top template information
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein;
PDBTitle: protein cgd2_2020 from cryptosporidium parvum
Confidence and coverage
Confidence: 45.1% Coverage: 9%
11 residues ( 9% of your sequence) have been modelled with 45.1% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2pd0D_
45.1 55
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein;
PDBTitle: protein cgd2_2020 from cryptosporidium parvum
2c4fbdB_
44.5 73
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: 2.35 angstrom crystal structure of conserved hypothetical protein from2 toxoplasma gondii me49.
3c5ue0A_
25.5 45
PDB header:protein binding
Chain: A: PDB Molecule:ct622 protein;
PDBTitle: 1.90 a resolution structure of ct622 c-terminal domain from chlamydia2 trachomatis
4c4mubA_
15.3 32
PDB header:transferase
Chain: A: PDB Molecule:sulfotransferase;
PDBTitle: schistosoma mansoni (blood fluke) sulfotransferase/oxamniquine complex
5c1or7C_
12.6 40
PDB header:transcription
Chain: C: PDB Molecule:sigma-e factor negative regulatory protein;
PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea
6d1or7c_
12.6 40
Fold:N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
Superfamily:N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
Family:N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
7c6in7A_
10.9 33
PDB header:transcription
Chain: A: PDB Molecule:sigma factor algu negative regulatory protein;
PDBTitle: crystal structure of algu in complex with muca(cyto)
8c2n3pA_
10.3 71
PDB header:toxin
Chain: A: PDB Molecule:asteropsin_g;
PDBTitle: solution nmr structure of asteropsin g from marine sponge asteropus
9c3hi2C_
8.7 56
PDB header:dna binding protein/toxin
Chain: C: PDB Molecule:hth-type transcriptional regulator mqsa(ygit);
PDBTitle: structure of the n-terminal domain of the e. coli antitoxin mqsa2 (ygit/b3021) in complex with the e. coli toxin mqsr (ygiu/b3022)
10c1s5rA_
8.7 73
PDB header:transcription
Chain: A: PDB Molecule:high mobility group box transcription factor 1;
PDBTitle: solution structure of hbp1 sid-msin3a pah2 complex
11d1pcea_
7.5 50
Fold:Kazal-type serine protease inhibitors
Superfamily:Kazal-type serine protease inhibitors
Family:Ovomucoid domain III-like
12c2q82A_
7.5 30
PDB header:structural protein
Chain: A: PDB Molecule:core protein p7;
PDBTitle: crystal structure of core protein p7 from pseudomonas phage phi12.2 northeast structural genomics target oc1
13c3piwA_
7.4 67
PDB header:cytokine
Chain: A: PDB Molecule:type i interferon 2;
PDBTitle: zebrafish interferon 2
14d1rh2a_
7.2 67
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
15d2dy1a3
6.6 45
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Translational machinery components
16d1au1a_
6.6 67
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
17d1b5la_
6.5 67
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
18d1wu3i_
6.3 56
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Interferons/interleukin-10 (IL-10)
19d2bv3a3
6.2 45
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Translational machinery components
20d1lr7a2
6.2 46
Fold:Kazal-type serine protease inhibitors
Superfamily:Kazal-type serine protease inhibitors
Family:Ovomucoid domain III-like
21c3oq3A_
not modelled 5.9 67
PDB header:cytokine/viral protein
Chain: A: PDB Molecule:interferon alpha-5;
PDBTitle: structural basis of type-i interferon sequestration by a poxvirus2 decoy receptor
22c2ihr1_
not modelled 5.9 56
PDB header:translation
Chain: 1: PDB Molecule:peptide chain release factor 2;
PDBTitle: rf2 of thermus thermophilus
23c3se4B_
not modelled 5.8 67
PDB header:immune system receptor
Chain: B: PDB Molecule:interferon omega-1;
PDBTitle: human ifnw-ifnar ternary complex
24c2ljyA_
not modelled 5.7 56
PDB header:metal binding protein
Chain: A: PDB Molecule:protein e6;
PDBTitle: haddock model structure of the n-terminal domain dimer of hpv16 e6
25d3ovoa_
not modelled 5.6 46
Fold:Kazal-type serine protease inhibitors
Superfamily:Kazal-type serine protease inhibitors
Family:Ovomucoid domain III-like
26c2mw0A_
not modelled 5.5 44
PDB header:protein binding
Chain: A: PDB Molecule:kalata b7;
PDBTitle: kalata b7 ser mutant
27c2gkvA_
not modelled 5.4 38
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:ovomucoid;
PDBTitle: crystal structure of the sgpb:p14'-ala32 omtky3-del(1-5)2 complex
28c2gkvB_
not modelled 5.4 38
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:ovomucoid;
PDBTitle: crystal structure of the sgpb:p14'-ala32 omtky3-del(1-5)2 complex
29c2gktI_
not modelled 5.4 38
PDB header:hydrolase inhibitor
Chain: I: PDB Molecule:ovomucoid;
PDBTitle: crystal structure of the p14'-ala32 variant of the n-2 terminally truncated omtky3-del(1-5)
30c1iy5A_
not modelled 5.3 38
PDB header:hydrolase
Chain: A: PDB Molecule:omsvp3;
PDBTitle: solution structure of wild type omsvp3
31c2ptfB_
not modelled 5.2 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein mth_863;
PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn

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