Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2662_(-)_2981492_2981764
DateWed Aug 7 12:50:31 BST 2019
Unique Job ID9eb8ce27f5d02e82
SequenceMDDLTRLRRE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:17.689 Y:18.747 Z:16.936
Model (left) based on template d2co5a1
Top template information
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:F93-like
Confidence and coverage
Confidence: 18.3% Coverage: 13%
12 residues ( 13% of your sequence) have been modelled with 18.3% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2co5a1



18.3 67
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:F93-like
2c1z2iA_



14.4 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:malate dehydrogenase;
PDBTitle: crystal structure of agrobacterium tumefaciens malate2 dehydrogenase, new york structural genomics consortium
3c2lnuA_



13.3 29
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the uncharacterized protein from gene locus2 rrnac0354 of haloarcula marismortui, northeast structural genomics3 consortium target hmr11
4c5m0jI_



11.2 64
PDB header:rna binding protein
Chain: I: PDB Molecule:swi5-dependent ho expression protein 2,swi5-dependent ho
PDBTitle: crystal structure of the cytoplasmic complex with she2p, she3p, and2 the ash1 mrna e3-localization element
5c3i0pA_



10.7 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:malate dehydrogenase;
PDBTitle: crystal structure of malate dehydrogenase from entamoeba histolytica
6d2eyqa6



10.3 43
Fold:TRCF domain-like
Superfamily:TRCF domain-like
Family:TRCF domain
7c2mrbA_



9.1 43
PDB header:metallothionein
Chain: A: PDB Molecule:cd7 metallothionein-2a;
PDBTitle: three-dimensional structure of rabbit liver cd-72 metallothionein-2a in aqueous solution determined by3 nuclear magnetic resonance
8c1wtjB_



8.5 32
PDB header:oxidoreductase
Chain: B: PDB Molecule:ureidoglycolate dehydrogenase;
PDBTitle: crystal structure of delta1-piperideine-2-carboxylate2 reductase from pseudomonas syringae pvar.tomato
9d1sxma_



7.4 50
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
10c2l3oA_



7.0 29
PDB header:cytokine
Chain: A: PDB Molecule:interleukin 3;
PDBTitle: solution structure of murine interleukin 3
11c1tz5A_



6.9 56
PDB header:hormone/growth factor
Chain: A: PDB Molecule:chimera of pancreatic hormone and neuropeptide y;
PDBTitle: [pnpy19-23]-hpp bound to dpc micelles
12d1mtxa_



6.4 60
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
13d2fyuk1



6.4 47
Fold:Single transmembrane helix
Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
14c2dezA_



6.3 50
PDB header:neuropeptide
Chain: A: PDB Molecule:peptide yy;
PDBTitle: structure of human pyy
15c5b52B_



5.9 64
PDB header:transcription
Chain: B: PDB Molecule:h-ns family protein mvat;
PDBTitle: crystal structure of the n-terminal domain of h-ns family protein turb
16c2qsrA_



5.8 30
PDB header:transcription
Chain: A: PDB Molecule:transcription-repair coupling factor;
PDBTitle: crystal structure of c-terminal domain of transcription-repair2 coupling factor
17c2bt7A_



5.8 45
PDB header:viral protein
Chain: A: PDB Molecule:sigma c;
PDBTitle: structure of the c-terminal receptor-binding domain of avian reovirus2 fibre sigmac, cd crystal form
18c4ol4A_



5.5 7
PDB header:lipid binding protein
Chain: A: PDB Molecule:proline-rich 28 kda antigen;
PDBTitle: crystal structure of secreted proline rich antigen mtc28 (rv0040c)2 from mycobacterium tuberculosis
19d1hlya_



5.5 60
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
20c1vbiA_



5.5 41
PDB header:oxidoreductase
Chain: A: PDB Molecule:type 2 malate/lactate dehydrogenase;
PDBTitle: crystal structure of type 2 malate/lactate dehydrogenase from thermus2 thermophilus hb8

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