Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2673_(-)_2989301_2990602
DateWed Aug 7 12:50:32 BST 2019
Unique Job ID2083099fe5a590a8
SequenceVYGALVTAAD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:57.126 Y:50.928 Z:63.658
Model (left) based on template c5f15A_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:4-amino-4-deoxy-l-arabinose (l-ara4n) transferase;
PDBTitle: crystal structure of arnt from cupriavidus metallidurans bound to2 undecaprenyl phosphate
Confidence and coverage
Confidence: 99.1% Coverage: 85%
367 residues ( 85% of your sequence) have been modelled with 99.1% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5f15A_



99.1 13
PDB header:transferase
Chain: A: PDB Molecule:4-amino-4-deoxy-l-arabinose (l-ara4n) transferase;
PDBTitle: crystal structure of arnt from cupriavidus metallidurans bound to2 undecaprenyl phosphate
2c6p25A_



99.0 15
PDB header:transferase
Chain: A: PDB Molecule:dolichyl-phosphate-mannose--protein mannosyltransferase 1;
PDBTitle: structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt22 complex bound to the sugar donor and a peptide acceptor
3c6p2rB_



98.8 16
PDB header:transferase
Chain: B: PDB Molecule:dolichyl-phosphate-mannose--protein mannosyltransferase 2;
PDBTitle: structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt22 complex bound to the sugar donor
4c3rceA_



94.9 15
PDB header:transferase/peptide
Chain: A: PDB Molecule:oligosaccharide transferase to n-glycosylate proteins;
PDBTitle: bacterial oligosaccharyltransferase pglb
5c3wajA_



85.4 17
PDB header:transferase
Chain: A: PDB Molecule:transmembrane oligosaccharyl transferase;
PDBTitle: crystal structure of the archaeoglobus fulgidus2 oligosaccharyltransferase (o29867_arcfu) complex with zn and sulfate
6c6eznF_



84.9 15
PDB header:membrane protein
Chain: F: PDB Molecule:dolichyl-diphosphooligosaccharide--protein
PDBTitle: cryo-em structure of the yeast oligosaccharyltransferase (ost) complex
7c6nbxG_



35.8 25
PDB header:oxidoreductase
Chain: G: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: t.elongatus ndh (data-set 2)
8c2lqtA_



22.0 17
PDB header:unknown function
Chain: A: PDB Molecule:coiled-coil-helix-coiled-coil-helix domain-containing
PDBTitle: solution structure of chchd7
9c5z7lD_



14.0 47
PDB header:signaling protein
Chain: D: PDB Molecule:5-azacytidine-induced protein 2;
PDBTitle: crystal structure of ndp52 skich region in complex with nap1
10c1jrjA_



11.8 30
PDB header:hormone/growth factor
Chain: A: PDB Molecule:exendin-4;
PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol
11d1g12a_



10.5 25
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Fungal zinc peptidase
12c5sxpG_



10.5 24
PDB header:signaling protein/ligase
Chain: G: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: structural basis for the interaction between itch prr and beta-pix
13c5sxpF_



10.3 28
PDB header:signaling protein/ligase
Chain: F: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: structural basis for the interaction between itch prr and beta-pix
14d2au5a1



9.7 19
Fold:EF2947-like
Superfamily:EF2947-like
Family:EF2947-like
15c2l64A_



9.4 20
PDB header:hormone
Chain: A: PDB Molecule:glucagon-like peptide 2;
PDBTitle: nmr solution structure of glp-2 in dhpc micelles
16c2mgyA_



9.3 13
PDB header:membrane protein
Chain: A: PDB Molecule:translocator protein;
PDBTitle: solution structure of the mitochondrial translocator protein (tspo) in2 complex with its high-affinity ligand pk11195
17c2khsB_



8.0 60
PDB header:hydrolase
Chain: B: PDB Molecule:nuclease;
PDBTitle: solution structure of snase121:snase(111-143) complex
18c1d0rA_



7.4 25
PDB header:hormone/growth factor
Chain: A: PDB Molecule:glucagon-like peptide-1-(7-36)-amide;
PDBTitle: solution structure of glucagon-like peptide-1-(7-36)-amide in2 trifluoroethanol/water
19d2r6gf1



7.3 17
Fold:MalF N-terminal region-like
Superfamily:MalF N-terminal region-like
Family:MalF N-terminal region-like
20c4mjkA_



7.0 38
PDB header:protein binding
Chain: A: PDB Molecule:crispr protein;
PDBTitle: crystal structure of a crispr protein from archaeoglobus fulgidus
21c2x3bB_



not modelled 6.6 18
PDB header:hydrolase
Chain: B: PDB Molecule:toxic extracellular endopeptidase;
PDBTitle: asap1 inactive mutant e294a, an extracellular toxic zinc2 metalloendopeptidase
22c1xb4C_



not modelled 6.6 45
PDB header:unknown function
Chain: C: PDB Molecule:hypothetical 23.6 kda protein in yuh1-ura8 intergenic
PDBTitle: crystal structure of subunit vps25 of the endosomal trafficking2 complex escrt-ii
23c3rq9B_



not modelled 6.4 33
PDB header:tse2-binding protein
Chain: B: PDB Molecule:type vi secretion immunity protein;
PDBTitle: structure of tsi2, a tse2-immunity protein from pseudomonas aeruginosa
24c4auoH_



not modelled 6.3 14
PDB header:hydrolase/peptide
Chain: H: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
25c4auoE_



not modelled 6.3 14
PDB header:hydrolase/peptide
Chain: E: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
26c2na6B_



not modelled 6.0 28
PDB header:apoptosis
Chain: B: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
27c2na6C_



not modelled 6.0 28
PDB header:apoptosis
Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
28c2na6A_



not modelled 6.0 28
PDB header:apoptosis
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
29d1xb4a1



not modelled 5.9 45
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
30c2zmeD_



not modelled 5.9 45
PDB header:protein transport
Chain: D: PDB Molecule:vacuolar protein-sorting-associated protein 25;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
31c4auoD_



not modelled 5.9 14
PDB header:hydrolase/peptide
Chain: D: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
32c4auoG_



not modelled 5.9 14
PDB header:hydrolase/peptide
Chain: G: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
33c4auoF_



not modelled 5.9 14
PDB header:hydrolase/peptide
Chain: F: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
34d1e0na_



not modelled 5.6 33
Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
35c4auoC_



not modelled 5.4 14
PDB header:hydrolase/peptide
Chain: C: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
36c5a4hA_



not modelled 5.3 41
PDB header:transferase
Chain: A: PDB Molecule:1-acylglycerol-3-phosphate o-acyltransferase abhd5;
PDBTitle: solution structure of the lipid droplet anchoring peptide2 of cgi-58 bound to dpc micelles

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below