Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2721c_(-)_3032530_3034629
DateWed Aug 7 12:50:37 BST 2019
Unique Job IDf91c4e305f9228cb
SequenceVNGQRGQLST ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.782 Y:31.448 Z:25.255
Model (left) based on template c1f3mB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha;
PDBTitle: crystal structure of human serine/threonine kinase pak1
Confidence and coverage
Confidence: 96.9% Coverage: 6%
45 residues ( 6% of your sequence) have been modelled with 96.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1f3mB_



96.9 18
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha;
PDBTitle: crystal structure of human serine/threonine kinase pak1
2c1e0aB_



94.1 22
PDB header:signalling protein/kinase
Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha;
PDBTitle: cdc42 complexed with the gtpase binding domain of p212 activated kinase
3c2lnhA_



83.0 12
PDB header:signaling protein/protein binding
Chain: A: PDB Molecule:neural wiskott-aldrich syndrome protein;
PDBTitle: enterohaemorrhagic e. coli (ehec) exploits a tryptophan switch to2 hijack host f-actin assembly
4c2odbB_



79.9 19
PDB header:protein binding
Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6;
PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6)
5c1ceeB_



77.7 15
PDB header:structural protein regulation
Chain: B: PDB Molecule:wiskott-aldrich syndrome protein wasp;
PDBTitle: solution structure of cdc42 in complex with the gtpase2 binding domain of wasp
6c2ov2O_



76.3 19
PDB header:protein binding/transferase
Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4;
PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4)
7c2k42A_



70.9 16
PDB header:signaling protein
Chain: A: PDB Molecule:wiskott-aldrich syndrome protein;
PDBTitle: solution structure of the gtpase binding domain of wasp in2 complex with espfu, an ehec effector
8c6nbxG_



58.5 14
PDB header:oxidoreductase
Chain: G: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: t.elongatus ndh (data-set 2)
9c2iyjA_



43.2 18
PDB header:isomerase
Chain: A: PDB Molecule:thiol disulfide interchange protein dsbc;
PDBTitle: crystal structure of the n-terminal dimer domain of e.coli2 dsbc
10d1eeja2



37.0 18
Fold:Cystatin-like
Superfamily:DsbC/DsbG N-terminal domain-like
Family:DsbC/DsbG N-terminal domain-like
11d1odha_



34.9 20
Fold:GCM domain
Superfamily:GCM domain
Family:GCM domain
12c6hq8B_



25.6 24
PDB header:hydrolase
Chain: B: PDB Molecule:beta-1,3-oligosaccharide phosphorylase;
PDBTitle: bacterial beta-1,3-oligosaccharide phosphorylase from gh149 with2 laminarihexaose bound at a surface site
13d1f5ja_



22.5 19
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
14c2yh5A_



21.6 26
PDB header:lipid binding protein
Chain: A: PDB Molecule:dapx protein;
PDBTitle: structure of the c-terminal domain of bamc
15c3hfkB_



21.0 34
PDB header:isomerase
Chain: B: PDB Molecule:4-methylmuconolactone methylisomerase;
PDBTitle: crystal structure of 4-methylmuconolactone methylisomerase (h52a) in2 complex with 4-methylmuconolactone
16d1t3ba2



20.8 12
Fold:Cystatin-like
Superfamily:DsbC/DsbG N-terminal domain-like
Family:DsbC/DsbG N-terminal domain-like
17d1igoa_



20.5 26
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
18c2c1fA_



19.3 13
PDB header:hydrolase
Chain: A: PDB Molecule:bifunctional endo-1,4-beta-xylanase a;
PDBTitle: the structure of the family 11 xylanase from neocallimastix2 patriciarum
19c2kncA_



18.9 24
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
20c2oruA_



15.9 33
PDB header:de novo protein
Chain: A: PDB Molecule:xtz1-peptide;
PDBTitle: solution structure of xtz1-peptide, a beta-hairpin peptide2 with a structured extension
21d1v58a2



not modelled 13.3 20
Fold:Cystatin-like
Superfamily:DsbC/DsbG N-terminal domain-like
Family:DsbC/DsbG N-terminal domain-like
22c4ml1D_



not modelled 11.8 21
PDB header:isomerase
Chain: D: PDB Molecule:dsbp;
PDBTitle: disulfide isomerase (dsbp) from multidrug resistance inca/c2 transferable plasmid in oxidized state (p212121 space group)
23c3rkoF_



not modelled 11.7 21
PDB header:oxidoreductase
Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
24d1mbma_



not modelled 10.5 33
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral proteases
25c1jzdA_



not modelled 8.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc;
PDBTitle: dsbc-dsbdalpha complex
26c3bnwA_



not modelled 7.6 33
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase, putative;
PDBTitle: crystal structure of riboflavin kinase from trypanosoma brucei
27c5d0qC_



not modelled 7.4 26
PDB header:protein transport
Chain: C: PDB Molecule:outer membrane protein assembly factor bamc;
PDBTitle: bamacde complex, outer membrane beta-barrel assembly machinery (bam)2 complex
28d1eyfa_



not modelled 7.0 19
Fold:Ada DNA repair protein, N-terminal domain (N-Ada 10)
Superfamily:Ada DNA repair protein, N-terminal domain (N-Ada 10)
Family:Ada DNA repair protein, N-terminal domain (N-Ada 10)
29d1h4ga_



not modelled 6.4 15
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
30d1t6gc_



not modelled 5.9 9
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
31d1nb9a_



not modelled 5.7 42
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Riboflavin kinase-like
Family:ATP-dependent riboflavin kinase-like
32d1xyna_



not modelled 5.6 18
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
33c1m57H_



not modelled 5.4 10
PDB header:oxidoreductase
Chain: H: PDB Molecule:cytochrome c oxidase;
PDBTitle: structure of cytochrome c oxidase from rhodobacter2 sphaeroides (eq(i-286) mutant))
34d1m4wa_



not modelled 5.1 12
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12
35c2zxcA_



not modelled 5.1 22
PDB header:hydrolase
Chain: A: PDB Molecule:neutral ceramidase;
PDBTitle: ceramidase complexed with c2

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