Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2722_(-)_3034645_3034893
DateWed Aug 7 12:50:37 BST 2019
Unique Job IDe501c5b1fa8caa73
SequenceMPCLARQPVD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.348 Y:22.933 Z:20.024
Model (left) based on template d1xm5a_
Top template information
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Predicted metal-dependent hydrolase
Confidence and coverage
Confidence: 18.1% Coverage: 30%
25 residues ( 30% of your sequence) have been modelled with 18.1% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1xm5a_



18.1 20
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Predicted metal-dependent hydrolase
2c6ht4A_



15.7 47
PDB header:unknown function
Chain: A: PDB Molecule:ns5a;
PDBTitle: nmr structure of ns5a-d2 (jfh1) peptide (304-323)
3c2mfrA_



14.0 100
PDB header:transferase
Chain: A: PDB Molecule:insulin receptor;
PDBTitle: solution structure of the transmembrane domain of the insulin receptor2 in micelles
4c1xaxA_



13.9 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical upf0054 protein hi0004;
PDBTitle: nmr structure of hi0004, a putative essential gene product2 from haemophilus influenzae
5d1qcsa1



13.4 29
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Cdc48 N-terminal domain-like
6d1tvia_



11.9 24
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Predicted metal-dependent hydrolase
7c2n73B_



11.8 32
PDB header:transferase/transferase regulator
Chain: B: PDB Molecule:phosphatidylinositol 4-kinase beta;
PDBTitle: solution structure of the acbd3:pi4kb complex
8c5od4A_



10.9 31
PDB header:unknown function
Chain: A: PDB Molecule:secreted in xylem 3;
PDBTitle: avr2 effector protein from the fungal plant pathogen fusarium2 oxysporum
9c2esyA_



9.7 42
PDB header:lipid binding protein
Chain: A: PDB Molecule:lung surfactant protein c;
PDBTitle: structure and influence on stability and activity of the n-2 terminal propetide part of lung surfactant protein c
10c3k8hA_



9.2 28
PDB header:membrane protein
Chain: A: PDB Molecule:30klp;
PDBTitle: structure of crystal form i of tp0453
11d1oz9a_



9.2 24
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Predicted metal-dependent hydrolase
12d1na6a1



9.2 25
Fold:DNA-binding pseudobarrel domain
Superfamily:DNA-binding pseudobarrel domain
Family:Type II restriction endonuclease effector domain
13d1x99a_



8.5 46
Fold:Cytolysin/lectin
Superfamily:Cytolysin/lectin
Family:Fungal fruit body lectin
14c3la6P_



8.4 29
PDB header:transferase
Chain: P: PDB Molecule:tyrosine-protein kinase wzc;
PDBTitle: octameric kinase domain of the e. coli tyrosine kinase wzc with bound2 adp
15d2h28a1



8.2 37
Fold:Profilin-like
Superfamily:YeeU-like
Family:YagB/YeeU/YfjZ-like
16c2eocA_



7.8 36
PDB header:transferase
Chain: A: PDB Molecule:poly [adp-ribose] polymerase 3;
PDBTitle: solution structure of the wgr domain from human poly [adp-2 ribose] polymerase-3
17c4v194_



7.6 25
PDB header:ribosome
Chain: 4: PDB Molecule:mitoribosomal protein bl31m, mrpl55;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
18c4yamA_



7.2 33
PDB header:transferase
Chain: A: PDB Molecule:beta-etherase;
PDBTitle: crystal structure of lige-apo form from sphingobium sp. strain syk-6
19c3iynR_



7.0 60
PDB header:virus
Chain: R: PDB Molecule:hexon-associated protein;
PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
20d1rk4a2



6.9 25
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione S-transferase (GST), N-terminal domain
21c2m5lA_



not modelled 6.8 40
PDB header:viral protein
Chain: A: PDB Molecule:ns5a protein;
PDBTitle: ns5a308
22d1j8yf2



not modelled 6.6 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
23c5xcoB_



not modelled 6.4 31
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:ace-arg-arg-arg-arg-cys-pro-leu-tyr-ile-ser-tyr-asp-pro-
PDBTitle: crystal structure of human k-ras g12d mutant in complex with gdp and2 cyclic inhibitory peptide
24c6qvfC_



not modelled 6.0 50
PDB header:dna binding protein
Chain: C: PDB Molecule:prepilin-like protein;
PDBTitle: tt_c0855 competence pilin from thermus thermophilus hb27
25d1g7oa2



not modelled 5.9 38
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione S-transferase (GST), N-terminal domain
26c3iynQ_



not modelled 5.5 60
PDB header:virus
Chain: Q: PDB Molecule:hexon-associated protein;
PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
27c6j3fB_



not modelled 5.2 38
PDB header:transferase
Chain: B: PDB Molecule:glutathione s-transferase;
PDBTitle: crystal structure of the glutathione s-transferase, csgst63524, of2 ceriporiopsis subvermispora in complex with glutathione
28d1ygya4



not modelled 5.2 38
Fold:FwdE/GAPDH domain-like
Superfamily:Serine metabolism enzymes domain
Family:SerA intervening domain-like
29c4lmwA_



not modelled 5.2 29
PDB header:transferase
Chain: A: PDB Molecule:glutathione transferase;
PDBTitle: crystal structure of glutathione transferase gstfua3 from2 phanerochaete chrysosporium

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite