Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2730_(-)_3042552_3043028
DateWed Aug 7 12:50:38 BST 2019
Unique Job ID92283dd698846a76
SequenceMMMNWRQTNI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:13.583 Y:16.552 Z:15.317
Model (left) based on template c2knuA_
Top template information
PDB header:membrane protein
Chain: A: PDB Molecule:genome polyprotein;
PDBTitle: solution structure of the transmembrane proximal region of2 the hepatis c virus e1 glycoprotein
Confidence and coverage
Confidence: 50.4% Coverage: 5%
8 residues ( 5% of your sequence) have been modelled with 50.4% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2knuA_



50.4 75
PDB header:membrane protein
Chain: A: PDB Molecule:genome polyprotein;
PDBTitle: solution structure of the transmembrane proximal region of2 the hepatis c virus e1 glycoprotein
2c6atkE_



20.8 33
PDB header:hydrolase/viral protein
Chain: E: PDB Molecule:spike glycoprotein;
PDBTitle: crystal structure of the human coronavirus 229e spike protein receptor2 binding domain in complex with human aminopeptidase n
3c1vw4G_



14.1 67
PDB header:ribosome
Chain: G: PDB Molecule:54s ribosomal protein l50, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
4c3kk4B_



13.2 28
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein bp1543;
PDBTitle: uncharacterized protein bp1543 from bordetella pertussis tohama i
5c2m7tA_



11.9 67
PDB header:protein binding
Chain: A: PDB Molecule:cystine knot protein 2.5d;
PDBTitle: solution nmr structure of engineered cystine knot protein 2.5d
6c5a4hA_



8.6 71
PDB header:transferase
Chain: A: PDB Molecule:1-acylglycerol-3-phosphate o-acyltransferase abhd5;
PDBTitle: solution structure of the lipid droplet anchoring peptide2 of cgi-58 bound to dpc micelles
7c2ahqA_



8.2 57
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor rpon;
PDBTitle: solution structure of the c-terminal rpon domain of sigma-2 54 from aquifex aeolicus
8c1kozA_



7.9 35
PDB header:toxin
Chain: A: PDB Molecule:voltage-dependent channel inhibitor;
PDBTitle: solution structure of omega-grammotoxin sia
9c3nctC_



7.7 71
PDB header:dna binding protein, chaperone
Chain: C: PDB Molecule:protein psib;
PDBTitle: x-ray crystal structure of the bacterial conjugation factor psib, a2 negative regulator of reca
10c1sb7A_



7.2 67
PDB header:lyase
Chain: A: PDB Molecule:trna pseudouridine synthase d;
PDBTitle: crystal structure of the e.coli pseudouridine synthase trud
11c2kzkA_



7.2 21
PDB header:protein transport
Chain: A: PDB Molecule:uncharacterized protein yol083w;
PDBTitle: solution structure of alpha-mannosidase binding domain of atg34
12c2vqzB_



6.8 14
PDB header:transcription
Chain: B: PDB Molecule:polymerase basic protein 2;
PDBTitle: structure of the cap-binding domain of influenza virus2 polymerase subunit pb2 with bound m7gtp
13c6cfzJ_



6.4 25
PDB header:nuclear protein
Chain: J: PDB Molecule:spc34;
PDBTitle: structure of the dash/dam1 complex shows its role at the yeast2 kinetochore-microtubule interface
14d1szwa_



6.0 67
Fold:Pseudouridine synthase
Superfamily:Pseudouridine synthase
Family:tRNA pseudouridine synthase TruD
15c4gu8G_



6.0 78
PDB header:sugar binding protein
Chain: G: PDB Molecule:burkholderia oklahomensis agglutinin (boa);
PDBTitle: crystal structure of burkholderia oklahomensis agglutinin (boa)
16c2kzbA_



6.0 29
PDB header:protein transport
Chain: A: PDB Molecule:autophagy-related protein 19;
PDBTitle: solution structure of alpha-mannosidase binding domain of atg19
17c1bkvA_



5.8 70
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
18c2lr3A_



5.8 42
PDB header:antifungal protein
Chain: A: PDB Molecule:defensin;
PDBTitle: solution structure of the anti-fungal defensin def4 (mtr_8g070770)2 from medicago truncatula (barrel clover)
19c5zghI_



5.5 67
PDB header:photosynthesis
Chain: I: PDB Molecule:psai;
PDBTitle: cryo-em structure of the red algal psi-lhcr
20c1bkvB_



5.3 70
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
21c1bkvC_



not modelled 5.3 70
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
22c1wbiD_



not modelled 5.3 21
PDB header:avidin-related protein
Chain: D: PDB Molecule:avidin-related protein 2;
PDBTitle: avr2
23c5un7A_



not modelled 5.2 31
PDB header:protein binding
Chain: A: PDB Molecule:protection of telomeres protein 1;
PDBTitle: structure of the human pot1-tpp1 telomeric complex
24c5nceA_



not modelled 5.2 36
PDB header:plant protein
Chain: A: PDB Molecule:defensin-1;
PDBTitle: structure of psdef1 defensin from pinus sylvestris

Binding site prediction 

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