Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2733c_(-)_3044996_3046534
DateWed Aug 7 12:50:39 BST 2019
Unique Job IDb445deed34b0fc37
SequenceMVAHDAAAGV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:71.064 Y:53.665 Z:63.466
Model (left) based on template c4jc0B_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:ribosomal protein s12 methylthiotransferase rimo;
PDBTitle: crystal structure of thermotoga maritima holo rimo in complex with2 pentasulfide, northeast structural genomics consortium target vr77
Confidence and coverage
Confidence:100.0% Coverage: 82%
421 residues ( 82% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4jc0B_
100.0 31
PDB header:transferase
Chain: B: PDB Molecule:ribosomal protein s12 methylthiotransferase rimo;
PDBTitle: crystal structure of thermotoga maritima holo rimo in complex with2 pentasulfide, northeast structural genomics consortium target vr77
2c2qgqF_
100.0 29
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:protein tm_1862;
PDBTitle: crystal structure of tm_1862 from thermotoga maritima. northeast2 structural genomics consortium target vr77
3c6fd2B_
100.0 18
PDB header:biosynthetic protein
Chain: B: PDB Molecule:putative apramycin biosynthetic oxidoreductase 4;
PDBTitle: radical sam 1,2-diol dehydratase aprd4 in complex with its substrate2 paromamine
4c5ul4A_
100.0 13
PDB header:metal binding protein
Chain: A: PDB Molecule:oxsb protein;
PDBTitle: structure of cobalamin-dependent s-adenosylmethionine radical enzyme2 oxsb with aqua-cobalamin and s-adenosylmethionine bound
5c3cixA_
100.0 15
PDB header:adomet binding protein
Chain: A: PDB Molecule:fefe-hydrogenase maturase;
PDBTitle: x-ray structure of the [fefe]-hydrogenase maturase hyde from2 thermotoga maritima in complex with thiocyanate
6d1olta_
100.0 20
Fold:TIM beta/alpha-barrel
Superfamily:Radical SAM enzymes
Family:Oxygen-independent coproporphyrinogen III oxidase HemN
7c4u0pB_
100.0 18
PDB header:transferase
Chain: B: PDB Molecule:lipoyl synthase 2;
PDBTitle: the crystal structure of lipoyl synthase in complex with s-adenosyl2 homocysteine
8c5exkG_
100.0 18
PDB header:transferase
Chain: G: PDB Molecule:lipoyl synthase;
PDBTitle: crystal structure of m. tuberculosis lipoyl synthase with 6-2 thiooctanoyl peptide intermediate
9c5l7jA_
100.0 16
PDB header:translation
Chain: A: PDB Molecule:elp3 family;
PDBTitle: crystal structure of elp3 from dehalococcoides mccartyi
10c3t7vA_
100.0 15
PDB header:transferase
Chain: A: PDB Molecule:methylornithine synthase pylb;
PDBTitle: crystal structure of methylornithine synthase (pylb)
11d1r30a_
100.0 17
Fold:TIM beta/alpha-barrel
Superfamily:Radical SAM enzymes
Family:Biotin synthase
12c1r30A_
100.0 17
PDB header:transferase
Chain: A: PDB Molecule:biotin synthase;
PDBTitle: the crystal structure of biotin synthase, an s-adenosylmethionine-2 dependent radical enzyme
13c6iazA_
100.0 17
PDB header:transferase
Chain: A: PDB Molecule:histone acetyltransferase, elp3 family;
PDBTitle: the archaeal methanocaldococcus infernus elp3 with n-terminus deletion2 (1-46)
14c6qk7C_
99.9 17
PDB header:translation
Chain: C: PDB Molecule:elongator complex protein 3;
PDBTitle: elongator catalytic subcomplex elp123 lobe
15c4wcxC_
99.9 11
PDB header:lyase
Chain: C: PDB Molecule:biotin and thiamin synthesis associated;
PDBTitle: crystal structure of hydg: a maturase of the [fefe]-hydrogenase
16c3rfaA_
99.9 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n;
PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine
17c3rfaB_
99.9 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:ribosomal rna large subunit methyltransferase n;
PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine
18c4rtbA_
99.8 14
PDB header:lyase
Chain: A: PDB Molecule:hydg protein;
PDBTitle: x-ray structure of the fefe-hydrogenase maturase hydg from2 carboxydothermus hydrogenoformans
19c6fz6B_
99.8 15
PDB header:transferase
Chain: B: PDB Molecule:probable dual-specificity rna methyltransferase rlmn;
PDBTitle: crystal structure of a radical sam methyltransferase from2 sphaerobacter thermophilus
20c5v1tA_
99.8 15
PDB header:metal binding protein
Chain: A: PDB Molecule:radical sam;
PDBTitle: crystal structure of streptococcus suis suib bound to precursor2 peptide suia
21c2yx0A_
not modelled 99.7 14
PDB header:metal binding protein
Chain: A: PDB Molecule:radical sam enzyme;
PDBTitle: crystal structure of p. horikoshii tyw1
22d1tv8a_
not modelled 99.7 13
Fold:TIM beta/alpha-barrel
Superfamily:Radical SAM enzymes
Family:MoCo biosynthesis proteins
23c4r33A_
not modelled 99.7 14
PDB header:lyase
Chain: A: PDB Molecule:nosl;
PDBTitle: x-ray structure of the tryptophan lyase nosl with tryptophan and s-2 adenosyl-l-homocysteine bound
24c5vslB_
not modelled 99.6 15
PDB header:antiviral protein
Chain: B: PDB Molecule:radical s-adenosyl methionine domain-containing protein 2;
PDBTitle: crystal structure of viperin with bound [4fe-4s] cluster and s-2 adenosylhomocysteine (sah)
25c2a5hC_
not modelled 99.6 15
PDB header:isomerase
Chain: C: PDB Molecule:l-lysine 2,3-aminomutase;
PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate).
26c3c8fA_
not modelled 99.5 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate formate-lyase 1-activating enzyme;
PDBTitle: 4fe-4s-pyruvate formate-lyase activating enzyme with partially2 disordered adomet
27c4fheA_
not modelled 99.5 14
PDB header:lyase
Chain: A: PDB Molecule:spore photoproduct lyase;
PDBTitle: spore photoproduct lyase c140a mutant
28c4k39A_
not modelled 99.5 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:anaerobic sulfatase-maturating enzyme;
PDBTitle: native ansmecpe with bound adomet and cp18cys peptide
29c6efnA_
not modelled 99.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:sporulation killing factor maturation protein skfb;
PDBTitle: structure of a ripp maturase, skfb
30c6b4cH_
not modelled 99.4 15
PDB header:antiviral protein
Chain: H: PDB Molecule:viperin;
PDBTitle: structure of viperin from trichoderma virens
31c5th5C_
not modelled 99.2 16
PDB header:lyase
Chain: C: PDB Molecule:7-carboxy-7-deazaguanine synthase;
PDBTitle: crystal structure of quee from bacillus subtilis with 6-carboxypterin-2 5'-deoxyadenosyl ester bound
32c5wggA_
not modelled 99.0 13
PDB header:peptide binding protein
Chain: A: PDB Molecule:radical sam domain protein;
PDBTitle: structural insights into thioether bond formation in the biosynthesis2 of sactipeptides
33c4m7tA_
not modelled 98.8 12
PDB header:metal binding protein
Chain: A: PDB Molecule:btrn;
PDBTitle: crystal structure of btrn in complex with adomet and 2-doia
34c6c8vA_
not modelled 98.3 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:coenzyme pqq synthesis protein e;
PDBTitle: x-ray structure of pqqe from methylobacterium extorquens
35c6nhlB_
not modelled 98.1 12
PDB header:lyase
Chain: B: PDB Molecule:7-carboxy-7-deazaguanine synthase;
PDBTitle: crystal structure of quee from escherichia coli
36c2z2uA_
not modelled 97.6 17
PDB header:metal binding protein
Chain: A: PDB Molecule:upf0026 protein mj0257;
PDBTitle: crystal structure of archaeal tyw1
37c4njkA_
not modelled 97.6 11
PDB header:lyase
Chain: A: PDB Molecule:7-carboxy-7-deazaguanine synthase;
PDBTitle: crystal structure of quee from burkholderia multivorans in complex2 with adomet, 7-carboxy-7-deazaguanine, and mg2+
38c3canA_
not modelled 97.5 20
PDB header:lyase activator
Chain: A: PDB Molecule:pyruvate-formate lyase-activating enzyme;
PDBTitle: crystal structure of a domain of pyruvate-formate lyase-activating2 enzyme from bacteroides vulgatus atcc 8482
39d7reqa2
not modelled 97.3 16
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
40c1e1cA_
not modelled 97.0 17
PDB header:isomerase
Chain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain;
PDBTitle: methylmalonyl-coa mutase h244a mutant
41c2ftpA_
not modelled 96.6 15
PDB header:lyase
Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase;
PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa
42d3bula2
not modelled 96.5 11
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
43d1ccwa_
not modelled 96.3 13
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
44c3rmjB_
not modelled 96.3 13
PDB header:transferase
Chain: B: PDB Molecule:2-isopropylmalate synthase;
PDBTitle: crystal structure of truncated alpha-isopropylmalate synthase from2 neisseria meningitidis
45c3ivuB_
not modelled 95.9 11
PDB header:transferase
Chain: B: PDB Molecule:homocitrate synthase, mitochondrial;
PDBTitle: homocitrate synthase lys4 bound to 2-og
46c2cw6B_
not modelled 95.8 12
PDB header:lyase
Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial;
PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria
47c1bmtB_
not modelled 95.8 13
PDB header:methyltransferase
Chain: B: PDB Molecule:methionine synthase;
PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
48c3bicA_
not modelled 95.5 15
PDB header:isomerase
Chain: A: PDB Molecule:methylmalonyl-coa mutase, mitochondrial precursor;
PDBTitle: crystal structure of human methylmalonyl-coa mutase
49c1y80A_
not modelled 95.5 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted cobalamin binding protein;
PDBTitle: structure of a corrinoid (factor iiim)-binding protein from moorella2 thermoacetica
50c2p10D_
not modelled 95.2 21
PDB header:hydrolase
Chain: D: PDB Molecule:mll9387 protein;
PDBTitle: crystal structure of a putative phosphonopyruvate hydrolase (mll9387)2 from mesorhizobium loti maff303099 at 2.15 a resolution
51c3ewbX_
not modelled 95.2 13
PDB header:transferase
Chain: X: PDB Molecule:2-isopropylmalate synthase;
PDBTitle: crystal structure of n-terminal domain of putative 2-isopropylmalate2 synthase from listeria monocytogenes
52c3eegB_
not modelled 94.9 11
PDB header:transferase
Chain: B: PDB Molecule:2-isopropylmalate synthase;
PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii
53c2yxbA_
not modelled 94.9 17
PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
54c4hh3C_
not modelled 94.8 20
PDB header:flavoprotein/transcription
Chain: C: PDB Molecule:appa protein;
PDBTitle: structure of the appa-ppsr2 core complex from rb. sphaeroides
55c2i2xD_
not modelled 94.3 13
PDB header:transferase
Chain: D: PDB Molecule:methyltransferase 1;
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
56c3bleA_
not modelled 93.6 10
PDB header:transferase
Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans;
PDBTitle: crystal structure of the catalytic domain of licms in complexed with2 malonate
57d1f6ya_
not modelled 93.5 10
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Methyltetrahydrofolate-utiluzing methyltransferases
58d1tx2a_
not modelled 93.5 12
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
59c1tx2A_
not modelled 93.5 12
PDB header:transferase
Chain: A: PDB Molecule:dhps, dihydropteroate synthase;
PDBTitle: dihydropteroate synthetase, with bound inhibitor manic, from bacillus2 anthracis
60c6reqB_
not modelled 93.1 15
PDB header:isomerase
Chain: B: PDB Molecule:protein (methylmalonyl-coa mutase);
PDBTitle: methylmalonyl-coa mutase, 3-carboxypropyl-coa inhibitor complex
61c3hpxB_
not modelled 92.9 14
PDB header:transferase
Chain: B: PDB Molecule:2-isopropylmalate synthase;
PDBTitle: crystal structure of mycobacterium tuberculosis leua active site2 domain 1-425 (truncation mutant delta:426-644)
62c3ct7E_
not modelled 92.8 11
PDB header:isomerase
Chain: E: PDB Molecule:d-allulose-6-phosphate 3-epimerase;
PDBTitle: crystal structure of d-allulose 6-phosphate 3-epimerase2 from escherichia coli k-12
63d1fmfa_
not modelled 92.6 14
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
64c3ezxA_
not modelled 92.5 13
PDB header:transferase
Chain: A: PDB Molecule:monomethylamine corrinoid protein 1;
PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein
65c1ydnA_
not modelled 92.3 14
PDB header:lyase
Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase;
PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35.
66c4hh0B_
not modelled 92.0 17
PDB header:flavoprotein,signaling protein
Chain: B: PDB Molecule:appa protein;
PDBTitle: dark-state structure of appa c20s without the cys-rich region from rb.2 sphaeroides
67d1nvma2
not modelled 92.0 13
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:HMGL-like
68c1nvmG_
not modelled 91.8 13
PDB header:lyase/oxidoreductase
Chain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase;
PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
69c6omzA_
not modelled 91.1 13
PDB header:ligase
Chain: A: PDB Molecule:dihydropteroate synthase;
PDBTitle: crystal structure of dihydropteroate synthase from mycobacterium2 smegmatis with bound 6-hydroxymethylpterin-monophosphate
70d1ajza_
not modelled 91.1 16
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
71c1zfjA_
not modelled 91.0 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
72d1ad1a_
not modelled 90.8 10
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
73c4e38A_
not modelled 90.8 12
PDB header:lyase
Chain: A: PDB Molecule:keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate
PDBTitle: crystal structure of probable keto-hydroxyglutarate-aldolase from2 vibrionales bacterium swat-3 (target efi-502156)
74d1qt1a_
not modelled 90.7 16
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Xylose isomerase
75c4jgiB_
not modelled 90.6 17
PDB header:protein binding
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: 1.5 angstrom crystal structure of a novel cobalamin-binding protein2 from desulfitobacterium hafniense dcb-2
76c3khdC_
not modelled 90.0 9
PDB header:transferase
Chain: C: PDB Molecule:pyruvate kinase;
PDBTitle: crystal structure of pff1300w.
77d1eyea_
not modelled 90.0 16
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
78c1ydoC_
not modelled 89.9 8
PDB header:lyase
Chain: C: PDB Molecule:hmg-coa lyase;
PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181.
79c6e1jB_
not modelled 89.7 10
PDB header:plant protein
Chain: B: PDB Molecule:2-isopropylmalate synthase, a genome specific 1;
PDBTitle: crystal structure of methylthioalkylmalate synthase (bjumam1.1) from2 brassica juncea
80d1yvca1
not modelled 89.1 27
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:TRAM domain
81c3lu2B_
not modelled 88.5 16
PDB header:hydrolase
Chain: B: PDB Molecule:lmo2462 protein;
PDBTitle: structure of lmo2462, a listeria monocytogenes amidohydrolase family2 putative dipeptidase
82c6gcsK_
not modelled 88.3 13
PDB header:oxidoreductase
Chain: K: PDB Molecule:psst subunit (nukm);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
83d1xima_
not modelled 87.8 15
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Xylose isomerase
84c4z87B_
not modelled 87.8 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: structure of the imp dehydrogenase from ashbya gossypii bound to gdp
85c3whpA_
not modelled 87.6 18
PDB header:gene regulation
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of the c-terminal domain of themus thermophilus litr2 in complex with cobalamin
86c5visB_
not modelled 87.6 11
PDB header:hydrolase,oxidoreductase
Chain: B: PDB Molecule:dihydropteroate synthase;
PDBTitle: 1.73 angstrom resolution crystal structure of dihydropteroate synthase2 (folp-smz_b27) from soil uncultured bacterium.
87d1yeza1
not modelled 87.4 20
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:TRAM domain
88c4af0B_
not modelled 87.3 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: crystal structure of cryptococcal inosine monophosphate2 dehydrogenase
89c6oviA_
not modelled 87.1 11
PDB header:lyase
Chain: A: PDB Molecule:keto-deoxy-phosphogluconate aldolase;
PDBTitle: crystal structure of kdpg aldolase from legionella pneumophila with2 pyruvate captured at low ph as a covalent carbinolamine intermediate
90d1k77a_
not modelled 86.9 12
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Hypothetical protein YgbM (EC1530)
91d1h1ya_
not modelled 86.7 12
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:D-ribulose-5-phosphate 3-epimerase
92c2h1fB_
not modelled 86.4 12
PDB header:transferase
Chain: B: PDB Molecule:lipopolysaccharide heptosyltransferase-1;
PDBTitle: e. coli heptosyltransferase waac with adp
93d1muwa_
not modelled 86.3 17
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Xylose isomerase
94c4fxsA_
not modelled 85.5 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: inosine 5'-monophosphate dehydrogenase from vibrio cholerae complexed2 with imp and mycophenolic acid
95d1liua2
not modelled 85.2 21
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate kinase
96c3tr9A_
not modelled 85.2 16
PDB header:transferase
Chain: A: PDB Molecule:dihydropteroate synthase;
PDBTitle: structure of a dihydropteroate synthase (folp) in complex with pteroic2 acid from coxiella burnetii
97c3f6cB_
not modelled 84.7 12
PDB header:dna binding protein
Chain: B: PDB Molecule:positive transcription regulator evga;
PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
98c4ov9A_
not modelled 84.4 14
PDB header:transferase
Chain: A: PDB Molecule:isopropylmalate synthase;
PDBTitle: structure of isopropylmalate synthase binding with alpha-2 isopropylmalate
99c5uurA_
not modelled 84.2 15
PDB header:transferase
Chain: A: PDB Molecule:dihydropteroate synthase;
PDBTitle: xanthomonas albilineans dihydropteroate synthase with 4-aminobenzoic2 acid
100c4o1fB_
not modelled 83.4 14
PDB header:transferase
Chain: B: PDB Molecule:dihydropteroate synthase dhps;
PDBTitle: structure of a methyltransferase component in complex with thf2 involved in o-demethylation
101c2yw3E_
not modelled 83.0 18
PDB header:lyase
Chain: E: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-
PDBTitle: crystal structure analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-2 deydro-3-deoxyphosphogluconate aldolase from tthb1
102d2glka1
not modelled 82.8 16
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Xylose isomerase
103c3cu2A_
not modelled 82.3 13
PDB header:isomerase
Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase;
PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution
104d1mxsa_
not modelled 82.1 10
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
105d1vhca_
not modelled 82.1 14
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
106c4fxjB_
not modelled 81.7 21
PDB header:transferase
Chain: B: PDB Molecule:pyruvate kinase isozymes m1/m2;
PDBTitle: structure of m2 pyruvate kinase in complex with phenylalanine
107c4r3uD_
not modelled 81.4 14
PDB header:isomerase
Chain: D: PDB Molecule:2-hydroxyisobutyryl-coa mutase small subunit;
PDBTitle: crystal structure of 2-hydroxyisobutyryl-coa mutase
108c2yciX_
not modelled 81.4 15
PDB header:transferase
Chain: X: PDB Molecule:5-methyltetrahydrofolate corrinoid/iron sulfur protein
PDBTitle: methyltransferase native
109c2zyfA_
not modelled 80.7 13
PDB header:transferase
Chain: A: PDB Molecule:homocitrate synthase;
PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate
110c2fmoA_
not modelled 80.1 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:5,10-methylenetetrahydrofolate reductase;
PDBTitle: ala177val mutant of e. coli methylenetetrahydrofolate2 reductase
111c4jn6C_
not modelled 79.6 14
PDB header:lyase/oxidoreductase
Chain: C: PDB Molecule:4-hydroxy-2-oxovalerate aldolase;
PDBTitle: crystal structure of the aldolase-dehydrogenase complex from2 mycobacterium tuberculosis hrv37
112c3qc3B_
not modelled 79.6 15
PDB header:isomerase
Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase;
PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
113c3gveB_
not modelled 77.5 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:yfkn protein;
PDBTitle: crystal structure of calcineurin-like phosphoesterase yfkn from2 bacillus subtilis
114d7reqb2
not modelled 77.3 17
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
115c6humK_
not modelled 75.3 17
PDB header:proton transport
Chain: K: PDB Molecule:nad(p)h-quinone oxidoreductase subunit k;
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
116c6fcgB_
not modelled 74.9 12
PDB header:hydrolase
Chain: B: PDB Molecule:glycoside hydrolase, gh17 family;
PDBTitle: crystal structure of an endo-laminarinase from formosa hel1_33_131
117d3bofa1
not modelled 74.8 10
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Methyltetrahydrofolate-utiluzing methyltransferases
118c2vefB_
not modelled 74.3 14
PDB header:transferase
Chain: B: PDB Molecule:dihydropteroate synthase;
PDBTitle: dihydropteroate synthase from streptococcus pneumoniae
119c3zu0A_
not modelled 74.3 12
PDB header:hydrolase
Chain: A: PDB Molecule:nad nucleotidase;
PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn)
120d1pswa_
not modelled 73.6 18
Fold:UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase
Family:ADP-heptose LPS heptosyltransferase II

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite