Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2737A_(-)_3051629_3051802
DateWed Aug 7 12:50:39 BST 2019
Unique Job ID1281cc002e4b5f92
SequenceVRPDLRARLV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.543 Y:33.080 Z:15.559
Model (left) based on template d2bs2b2
Top template information
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
Confidence and coverage
Confidence: 20.8% Coverage: 32%
18 residues ( 32% of your sequence) have been modelled with 20.8% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2bs2b2



20.8 56
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
2d1kf6b2



19.8 56
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
3d2jeka1



14.0 19
Fold:Rv1873-like
Superfamily:Rv1873-like
Family:Rv1873-like
4d1nekb2



13.8 61
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
5c3hshA_



13.2 25
PDB header:protein binding
Chain: A: PDB Molecule:collagen alpha-1(xviii) chain;
PDBTitle: crystal structure of human collagen xviii trimerization domain2 (tetragonal crystal form)
6d1b8ta1



9.7 63
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
7c3n3fB_



9.2 38
PDB header:protein binding
Chain: B: PDB Molecule:collagen alpha-1(xv) chain;
PDBTitle: crystal structure of the human collagen xv trimerization domain: a2 potent trimerizing unit common to multiplexin collagens
8c2hd0D_



8.3 24
PDB header:hydrolase
Chain: D: PDB Molecule:protease ns2-3 (p23);
PDBTitle: structure of the catalytic domain of hepatitis c virus ns2
9d1fsha_



6.9 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DEP domain
10c2xm5A_



6.7 24
PDB header:transferase
Chain: A: PDB Molecule:cloq;
PDBTitle: structural and mechanistic analysis of the magnesium-independent2 aromatic prenyltransferase cloq from the clorobiocin biosynthetic3 pathway
11c5xmjJ_



6.3 42
PDB header:electron transport
Chain: J: PDB Molecule:succinate dehydrogenase iron-sulfur subunit;
PDBTitle: crystal structure of quinol:fumarate reductase from desulfovibrio2 gigas
12c3f6qB_



5.3 29
PDB header:signaling protein/signaling protein
Chain: B: PDB Molecule:lim and senescent cell antigen-like-containing
PDBTitle: crystal structure of integrin-linked kinase ankyrin repeat2 domain in complex with pinch1 lim1 domain

Binding site prediction 

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