Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2749_(-)_3062515_3062829
DateWed Aug 7 12:50:40 BST 2019
Unique Job ID7f59c7de36ea9f85
SequenceMPVVVVATLT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:31.458 Y:33.270 Z:41.493
Model (left) based on template d2pd1a1
Top template information
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
Confidence and coverage
Confidence:100.0% Coverage: 93%
97 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2pd1a1



100.0 23
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
2c2omoC_



99.9 14
PDB header:oxidoreductase
Chain: C: PDB Molecule:duf176;
PDBTitle: putative antibiotic biosynthesis monooxygenase from nitrosomonas2 europaea
3d1y0ha_



99.9 27
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
4d2omoa1



99.9 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
5c2bbeA_



99.9 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein so0527;
PDBTitle: crystal structure of protein so0527 from shewanella oneidensis
6c3e8oB_



99.9 26
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (dr_2100) from deinococcus radiodurans at 1.40 a resolution
7c3bm7A_



99.9 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein of unknown function with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (cc_2132) from caulobacter crescentus cb15 at 1.35 a resolution
8c4dpoA_



99.9 26
PDB header:unknown function
Chain: A: PDB Molecule:conserved protein;
PDBTitle: crystal structure of a conserved protein mm_1583 from methanosarcina2 mazei go1
9c2gffB_



99.9 17
PDB header:sugar binding protein
Chain: B: PDB Molecule:lsrg protein;
PDBTitle: crystal structure of yersinia pestis lsrg
10c3fgvB_



99.9 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (spo2313) from silicibacter pomeroyi dss-3 at 1.30 a resolution
11c4zosA_



99.9 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein ye0340 from yersinia enterocolitica subsp.
PDBTitle: 2.20 angstrom resolution crystal structure of protein ye0340 of2 unidentified function from yersinia enterocolitica subsp.3 enterocolitica 8081]
12c4dn9B_



99.9 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 from chloroflexus aurantiacus j-10-fl
13d1tuva_



99.9 27
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
14c3mcsB_



99.9 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (fn1347) from2 fusobacterium nucleatum subsp. nucleatum atcc 25586 at 2.55 a3 resolution
15c4hl9B_



99.9 26
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of antibiotic biosynthesis monooxygenase
16c3kkfA_



99.9 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_810307.1) from bacteriodes thetaiotaomicron vpi-5482 at 1.30 a3 resolution
17c2fb0A_



99.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of conserved protein of unknown function from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution, possible3 oxidoreductase
18d1x7va_



99.9 28
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
19c3gz7B_



99.9 19
PDB header:biosynthetic protein
Chain: B: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_888398.1) from bordetella bronchiseptica at 2.15 a resolution
20c3f44A_



99.9 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (yp_193413.1) from2 lactobacillus acidophilus ncfm at 1.55 a resolution
21d1q8ba_



not modelled 99.8 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YjcS
22c3hx9B_



not modelled 99.8 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein rv3592;
PDBTitle: structure of heme-degrader, mhud (rv3592), from2 mycobacterium tuberculosis with two hemes bound in its3 active site
23c6fxdB_



not modelled 99.8 18
PDB header:biosynthetic protein
Chain: B: PDB Molecule:mupz;
PDBTitle: crystal structure of mupz from pseudomonas fluorescens
24c3kngA_



not modelled 99.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:snoab;
PDBTitle: crystal structure of snoab, a cofactor-independent oxygenase2 from streptomyces nogalater, determined to 1.9 resolution
25d1iuja_



not modelled 99.8 18
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
26c5f9pA_



not modelled 99.5 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:anthrone oxidase-like protein;
PDBTitle: crystal structure study of anthrone oxidase-like protein
27c3tvzA_



not modelled 99.4 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative uncharacterized protein yhgc;
PDBTitle: structure of bacillus subtilis hmob
28d2zdpa1



not modelled 99.3 7
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
29c2rilA_



not modelled 99.3 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of a putative monooxygenase (yp_001095275.1) from2 shewanella loihica pv-4 at 1.26 a resolution
30c3fj2A_



not modelled 99.3 15
PDB header:unknown function
Chain: A: PDB Molecule:monooxygenase-like protein;
PDBTitle: crystal structure of a monooxygenase-like protein (lin2316) from2 listeria innocua at 1.85 a resolution
31d1xbwa_



not modelled 99.1 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
32d1lq9a_



not modelled 99.1 23
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Actinorhodin biosynthesis monooxygenase ActVa-Orf6
33c4ae5C_



not modelled 99.0 15
PDB header:signaling protein
Chain: C: PDB Molecule:signal transduction protein trap;
PDBTitle: structure of a major regulator of staphylococcal pathogenesis
34d1tz0a_



not modelled 99.0 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
35c3bn7A_



not modelled 97.7 11
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (cc_2267) from2 caulobacter crescentus cb15 at 1.64 a resolution
36d1q4ra_



not modelled 97.5 20
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
37c3bdeA_



not modelled 97.5 14
PDB header:unknown function
Chain: A: PDB Molecule:mll5499 protein;
PDBTitle: crystal structure of a dabb family protein with a ferredoxin-like fold2 (mll5499) from mesorhizobium loti maff303099 at 1.79 a resolution
38c5y02D_



not modelled 97.5 10
PDB header:lyase
Chain: D: PDB Molecule:hydroxynitrile lyase;
PDBTitle: c-terminal peptide depleted mutant of hydroxynitrile lyase from2 passiflora edulis (pehnl) bound with (r)-mandelonitrile
39d1tr0a_



not modelled 97.4 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
40c2qycA_



not modelled 97.4 18
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (bb1511) from2 bordetella bronchiseptica rb50 at 1.90 a resolution
41c3bguA_



not modelled 97.2 13
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein of unknown function;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (tfu_0763) from thermobifida fusca yx at 1.50 a resolution
42c3bb5B_



not modelled 97.1 17
PDB header:unknown function
Chain: B: PDB Molecule:stress responsive alpha-beta protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (jann_3925) from jannaschia sp. ccs1 at 2.30 a resolution
43d1rjja_



not modelled 97.0 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
44d2cb2a1



not modelled 96.9 22
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:SOR-like
45c3hfkB_



not modelled 96.9 17
PDB header:isomerase
Chain: B: PDB Molecule:4-methylmuconolactone methylisomerase;
PDBTitle: crystal structure of 4-methylmuconolactone methylisomerase (h52a) in2 complex with 4-methylmuconolactone
46c2qlwA_



not modelled 96.5 12
PDB header:isomerase
Chain: A: PDB Molecule:rhau;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum
47c2qlxA_



not modelled 96.5 12
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum in complex with l-rhamnose
48c3fmbA_



not modelled 96.4 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dimeric protein of unknown function and ferredoxin-like
PDBTitle: crystal structure of dimeric protein of unknown function and2 ferredoxin-like fold (yp_212648.1) from bacteroides fragilis nctc3 9343 at 1.85 a resolution
49d1x8da1



not modelled 96.4 10
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:YiiL-like
50c5ixuA_



not modelled 96.2 12
PDB header:structural genomics/unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap domain protein from2 burkholderia xenovorans
51d2go8a1



not modelled 96.1 17
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
52d1vqya1



not modelled 95.8 7
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
53c5k9fA_



not modelled 95.4 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:nipsnap domain protein;
PDBTitle: crystal structure of a nipsnap domain protein from burkholderia2 xenovorans
54d1vqsa_



not modelled 95.3 8
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
55c5b0aA_



not modelled 95.3 15
PDB header:lyase
Chain: A: PDB Molecule:olivetolic acid cyclase;
PDBTitle: polyketide cyclase oac from cannabis sativa, h5q mutant
56c2jdjB_



not modelled 95.0 11
PDB header:biosynthetic protein
Chain: B: PDB Molecule:redy-like protein;
PDBTitle: crystal structure of hapk from hahella chejuensis
57d2ftra1



not modelled 94.3 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:EthD-like
58c5kakE_



not modelled 93.4 13
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap-like domain protein2 from burkholderia xenovorans
59c6hhnA_



not modelled 93.3 9
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of l-rhamnose mutarotase fa22100 from formosa2 agariphila
60d2hiqa1



not modelled 93.1 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YdhR
61c1wd6B_



not modelled 91.9 12
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein ydhr;
PDBTitle: crystal structure of jw1657 from escherichia coli
62c3lo3E_



not modelled 72.9 10
PDB header:structure genomics, unknown function
Chain: E: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 colwellia psychrerythraea 34h.
63d2fiua1



not modelled 64.8 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Atu0297-like
64c3bf4B_



not modelled 63.1 13
PDB header:unknown function
Chain: B: PDB Molecule:ethyl tert-butyl ether degradation ethd protein;
PDBTitle: crystal structure of an ethd-like protein (reut_b5694) from ralstonia2 eutropha jmp134 at 2.10 a resolution
65c3dcaC_



not modelled 61.1 13
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:rpa0582;
PDBTitle: crystal structure of the rpa0582- protein of unknown2 function from rhodopseudomonas palustris- a structural3 genomics target
66c3a16C_



not modelled 60.7 17
PDB header:lyase
Chain: C: PDB Molecule:aldoxime dehydratase;
PDBTitle: crystal structure of aldoxime dehydratase (oxdre) in complex2 with propionaldoxime
67c3gn6B_



not modelled 59.0 17
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ct0912, orfan protein with a ferredoxin-like domain repeat;
PDBTitle: crystal structure of ct0912, orfan protein from chlorobium tepidum2 with a ferredoxin-like domain repeat (np_661805.1) from chlorobium3 tepidum tls at 1.80 a resolution
68c5cw9A_



not modelled 54.6 15
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed ferredoxin-ferredoxin domain insertion
PDBTitle: crystal structure of de novo designed ferredoxin-ferredoxin domain2 insertion protein
69d2cfxa2



not modelled 29.8 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
70c2kl8A_



not modelled 23.6 10
PDB header:de novo protein
Chain: A: PDB Molecule:or15;
PDBTitle: solution nmr structure of de novo designed ferredoxin-like fold2 protein, northeast structural genomics consortium target or15
71d2ifxa1



not modelled 22.2 22
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:MmlI-like
72d2pbza2



not modelled 20.4 17
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
73d2okqa1



not modelled 16.2 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:YbaA-like
74c4hhuA_



not modelled 15.8 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:or280;
PDBTitle: crystal structure of engineered protein. northeast structural genomics2 consortium target or280.
75d2cs4a1



not modelled 15.0 23
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
76c4o8uE_



not modelled 13.1 14
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein pf2046;
PDBTitle: structure of pf2046
77c3x37A_



not modelled 11.0 13
PDB header:replication regulator
Chain: A: PDB Molecule:zyro0c14696p;
PDBTitle: crystal structure of the n-terminal domain of sld7 in complex with2 sld3
78d1zr9a1



not modelled 10.8 15
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
79c1zr9A_



not modelled 10.8 15
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein
80c4ky3A_



not modelled 9.3 13
PDB header:de novo protein
Chain: A: PDB Molecule:designed protein or327;
PDBTitle: three-dimensional structure of the orthorhombic crystal of2 computationally designed insertion domain , northeast structural3 genomics consortium (nesg) target or327
81c2kllA_



not modelled 9.0 21
PDB header:cytokine
Chain: A: PDB Molecule:interleukin-33;
PDBTitle: solution structure of human interleukin-33
82c2k9hA_



not modelled 7.2 28
PDB header:metal binding protein
Chain: A: PDB Molecule:glycoprotein;
PDBTitle: the hantavirus glycoprotein g1 tail contains a dual cchc-2 type classical zinc fingers
83c3maeA_



not modelled 6.7 6
PDB header:transferase
Chain: A: PDB Molecule:2-oxoisovalerate dehydrogenase e2 component,
PDBTitle: crystal structure of probable dihydrolipoamide acetyltransferase from2 listeria monocytogenes 4b f2365
84d2pc6a1



not modelled 6.7 13
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
85c2e1aD_



not modelled 6.5 11
PDB header:transcription
Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc;
PDBTitle: crystal structure of ffrp-dm1
86d2f1fa2



not modelled 6.4 9
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
87c3rqcB_



not modelled 5.9 7
PDB header:transferase
Chain: B: PDB Molecule:probable lipoamide acyltransferase;
PDBTitle: crystal structure of the catalytic core of the 2-oxoacid dehydrogenase2 multienzyme complex from thermoplasma acidophilum
88c6ip4A_



not modelled 5.5 9
PDB header:gene regulation
Chain: A: PDB Molecule:arabidopsis jmj13;
PDBTitle: crystal structure of arabidopsis thaliana jmj13 catalytic domain in2 complex with nog and an h3k27me3 peptide
89d2fgca1



not modelled 5.4 13
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
90c2pbzC_



not modelled 5.3 17
PDB header:ligase
Chain: C: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of an imp biosynthesis protein purp from2 thermococcus kodakaraensis

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