Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2756c_(hsdM)_3068471_3070093
DateWed Aug 7 12:50:41 BST 2019
Unique Job ID2a2c015003ee23db
SequenceMPPRKKQAPQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:74.706 Y:51.078 Z:76.321
Model (left) based on template c3lkdB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:type i restriction-modification system methyltransferase
PDBTitle: crystal structure of the type i restriction-modification system2 methyltransferase subunit from streptococcus thermophilus, northeast3 structural genomics consortium target sur80
Confidence and coverage
Confidence:100.0% Coverage: 82%
445 residues ( 82% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
530 residues ( 98%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3lkdB_
100.0 26
PDB header:transferase
Chain: B: PDB Molecule:type i restriction-modification system methyltransferase
PDBTitle: crystal structure of the type i restriction-modification system2 methyltransferase subunit from streptococcus thermophilus, northeast3 structural genomics consortium target sur80
2c3khkA_
100.0 50
PDB header:dna binding protein
Chain: A: PDB Molecule:type i restriction-modification system methylation subunit;
PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei.
3c5ybbA_
100.0 20
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:type i restriction-modification system methyltransferase
PDBTitle: structural basis underlying complex assembly andconformational2 transition of the type i r-m system
4d2okca1
100.0 20
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:N-6 DNA Methylase-like
5d2ar0a1
100.0 24
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:N-6 DNA Methylase-like
6c3ufbA_
100.0 21
PDB header:transferase
Chain: A: PDB Molecule:type i restriction-modification system methyltransferase
PDBTitle: crystal structure of a modification subunit of a putative type i2 restriction enzyme from vibrio vulnificus yj016
7d2f8la1
100.0 17
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:N-6 DNA Methylase-like
8c3s1sA_
100.0 15
PDB header:hydrolase, transferase
Chain: A: PDB Molecule:restriction endonuclease bpusi;
PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi
9c5hr4J_
100.0 15
PDB header:hydrolase/dna
Chain: J: PDB Molecule:mmei;
PDBTitle: structure of type iil restriction-modification enzyme mmei in complex2 with dna has implications for engineering of new specificities
10c1aqjB_
100.0 20
PDB header:methyltransferase
Chain: B: PDB Molecule:adenine-n6-dna-methyltransferase taqi;
PDBTitle: structure of adenine-n6-dna-methyltransferase taqi
11c1g38A_
100.0 18
PDB header:transferase/dna
Chain: A: PDB Molecule:modification methylase taqi;
PDBTitle: adenine-specific methyltransferase m. taq i/dna complex
12d2ih2a1
100.0 20
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:DNA methylase TaqI, N-terminal domain
13c4xqkB_
100.0 18
PDB header:hydrolase/dna
Chain: B: PDB Molecule:llabiii;
PDBTitle: atp-dependent type isp restriction-modification enzyme llabiii bound2 to dna
14c5e72A_
99.8 22
PDB header:transferase
Chain: A: PDB Molecule:n2, n2-dimethylguanosine trna methyltransferase;
PDBTitle: crystal structure of the archaeal trna m2g/m22g10 methyltransferase2 (atrm11) in complex with s-adenosyl-l-methionine (sam) from3 thermococcus kodakarensis
15c3lduA_
99.8 16
PDB header:transferase
Chain: A: PDB Molecule:putative methylase;
PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630.
16c3ldgA_
99.8 13
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein smu.472;
PDBTitle: crystal structure of smu.472, a putative methyltransferase complexed2 with sah
17c6h2uA_
99.8 13
PDB header:transferase
Chain: A: PDB Molecule:methyltransferase-like protein 5;
PDBTitle: crystal structure of human mettl5-trmt112 complex, the 18s rrna2 m6a1832 methyltransferase at 1.6a resolution
18c3k0bA_
99.8 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase;
PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365
19c3tmaA_
99.8 17
PDB header:transferase
Chain: A: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of trmn from thermus thermophilus
20d1wy7a1
99.7 15
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Ta1320-like
21c3tm4A_
not modelled 99.7 21
PDB header:transferase
Chain: A: PDB Molecule:trna (guanine n2-)-methyltransferase trm14;
PDBTitle: crystal structure of trm14 from pyrococcus furiosus in complex with s-2 adenosylmethionine
22d1nv8a_
not modelled 99.7 16
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:N5-glutamine methyltransferase, HemK
23c3evzA_
not modelled 99.6 11
PDB header:transferase
Chain: A: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of methyltransferase from pyrococcus furiosus
24c3fuxB_
not modelled 99.6 19
PDB header:transferase
Chain: B: PDB Molecule:dimethyladenosine transferase;
PDBTitle: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in2 complex with 5'-methylthioadenosine in space group p212121
25c6h1dA_
not modelled 99.6 13
PDB header:gene regulation
Chain: A: PDB Molecule:hemk methyltransferase family member 2;
PDBTitle: crystal structure of c21orf127-trmt112 in complex with sah
26d1zq9a1
not modelled 99.6 14
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA adenine dimethylase-like
27c2ozvA_
not modelled 99.5 19
PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein atu0636;
PDBTitle: crystal structure of a predicted o-methyltransferase, protein atu6362 from agrobacterium tumefaciens.
28d2as0a2
not modelled 99.5 17
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:hypothetical RNA methyltransferase
29d2b3ta1
not modelled 99.5 17
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:N5-glutamine methyltransferase, HemK
30c4dmgA_
not modelled 99.5 13
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein ttha1493;
PDBTitle: thermus thermophilus m5c1942 methyltransferase rlmo
31c3v8vB_
not modelled 99.5 21
PDB header:transferase
Chain: B: PDB Molecule:ribosomal rna large subunit methyltransferase l;
PDBTitle: crystal structure of bifunctional methyltransferase ycby (rlmlk) from2 escherichia coli, sam binding
32c3gdhC_
not modelled 99.5 17
PDB header:transferase
Chain: C: PDB Molecule:trimethylguanosine synthase homolog;
PDBTitle: methyltransferase domain of human trimethylguanosine synthase 1 (tgs1)2 bound to m7gtp and adenosyl-homocysteine (active form)
33c3egiA_
not modelled 99.5 14
PDB header:transferase
Chain: A: PDB Molecule:trimethylguanosine synthase homolog;
PDBTitle: methyltransferase domain of human trimethylguanosine synthase tgs12 bound to m7gpppa (inactive form)
34c2b78A_
not modelled 99.5 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein smu.776;
PDBTitle: a putative sam-dependent methyltransferase from streptococcus mutans
35d1qyra_
not modelled 99.5 15
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA adenine dimethylase-like
36c2pjdA_
not modelled 99.5 20
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c;
PDBTitle: crystal structure of 16s rrna methyltransferase rsmc
37d1dusa_
not modelled 99.5 21
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Hypothetical protein MJ0882
38c3c0kB_
not modelled 99.4 13
PDB header:transferase
Chain: B: PDB Molecule:upf0064 protein yccw;
PDBTitle: crystal structure of a ribosomal rna methyltranferase
39d2b78a2
not modelled 99.4 12
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:hypothetical RNA methyltransferase
40c3grrA_
not modelled 99.4 16
PDB header:transferase
Chain: A: PDB Molecule:dimethyladenosine transferase;
PDBTitle: crystal structure of the complex between s-adenosyl homocysteine and2 methanocaldococcus jannaschi dim1.
41c4dcmA_
not modelled 99.4 16
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase g;
PDBTitle: crystal structure of methyltransferase rlmg modifying g1835 of 23s2 rrna in escherichia coli
42c5u18A_
not modelled 99.4 19
PDB header:transferase
Chain: A: PDB Molecule:n-3'' methyltransferase;
PDBTitle: crystal structure of a methyltransferase involved in the biosynthesis2 of gentamicin in complex with the geneticin
43c3fydA_
not modelled 99.4 16
PDB header:transferase
Chain: A: PDB Molecule:probable dimethyladenosine transferase;
PDBTitle: crystal structure of dim1 from the thermophilic archeon,2 methanocaldococcus jannaschi
44d1ne2a_
not modelled 99.4 15
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Ta1320-like
45c2yxlA_
not modelled 99.4 17
PDB header:transferase
Chain: A: PDB Molecule:450aa long hypothetical fmu protein;
PDBTitle: crystal structure of ph0851
46c2as0A_
not modelled 99.4 17
PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein ph1915;
PDBTitle: crystal structure of ph1915 (apc 5817): a hypothetical rna2 methyltransferase
47c6ifsB_
not modelled 99.4 16
PDB header:transferase
Chain: B: PDB Molecule:ribosomal rna small subunit methyltransferase a;
PDBTitle: ksga from bacillus subtilis 168
48d1o9ga_
not modelled 99.4 20
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA methyltransferase AviRa
49c3lpmA_
not modelled 99.4 20
PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of putative methyltransferase small domain protein2 from listeria monocytogenes
50c3vseA_
not modelled 99.4 15
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of methyltransferase
51d1sqga2
not modelled 99.4 16
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:NOL1/NOP2/sun
52c3a26A_
not modelled 99.4 14
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein ph0793;
PDBTitle: crystal structure of p. horikoshii tyw2 in complex with2 mesado
53d1wxxa2
not modelled 99.4 16
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:hypothetical RNA methyltransferase
54c3axtA_
not modelled 99.4 18
PDB header:transferase
Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase
PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine
55d2frna1
not modelled 99.3 13
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Met-10+ protein-like
56d1yuba_
not modelled 99.3 14
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA adenine dimethylase-like
57d2fpoa1
not modelled 99.3 15
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:YhhF-like
58c3uzuA_
not modelled 99.3 15
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase a;
PDBTitle: the structure of the ribosomal rna small subunit methyltransferase a2 from burkholderia pseudomallei
59c4jxjA_
not modelled 99.3 13
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase a;
PDBTitle: crystal structure of ribosomal rna small subunit methyltransferase a2 from rickettsia bellii determined by iodide sad phasing
60c1wxwA_
not modelled 99.3 14
PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein ttha1280;
PDBTitle: crystal structure of tt1595, a putative sam-dependent2 methyltransferase from thermus thermophillus hb8
61c3q87B_
not modelled 99.3 13
PDB header:transferase activator/transferase
Chain: B: PDB Molecule:n6 adenine specific dna methylase;
PDBTitle: structure of e. cuniculi mtq2-trm112 complex responible for the2 methylation of erf1 translation termination factor
62c5yacA_
not modelled 99.3 14
PDB header:rna binding protein
Chain: A: PDB Molecule:trna (guanine(37)-n1)-methyltransferase trm5b;
PDBTitle: crystal structure of wt trm5b from pyrococcus abyssi
63c3dmgA_
not modelled 99.3 21
PDB header:transferase
Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase;
PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy
64c3lbyA_
not modelled 99.3 14
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein smu.1697c;
PDBTitle: crystal structure of smu.1697c, a putative methyltransferase from2 streptococcus mutans in complex with sah
65d2ifta1
not modelled 99.3 16
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:YhhF-like
66d1uwva2
not modelled 99.3 21
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:(Uracil-5-)-methyltransferase
67c3e05B_
not modelled 99.3 14
PDB header:transferase
Chain: B: PDB Molecule:precorrin-6y c5,15-methyltransferase (decarboxylating);
PDBTitle: crystal structure of precorrin-6y c5,15-methyltransferase from2 geobacter metallireducens gs-15
68c3eeyJ_
not modelled 99.3 16
PDB header:transferase
Chain: J: PDB Molecule:putative rrna methylase;
PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum
69d1qama_
not modelled 99.3 15
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA adenine dimethylase-like
70c1sqgA_
not modelled 99.3 16
PDB header:transferase
Chain: A: PDB Molecule:sun protein;
PDBTitle: the crystal structure of the e. coli fmu apoenzyme at 1.652 a resolution
71c3a4tA_
not modelled 99.2 13
PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase mj0026;
PDBTitle: crystal structure of atrm4 from m.jannaschii with sinefungin
72c3tqsB_
not modelled 99.2 13
PDB header:transferase
Chain: B: PDB Molecule:ribosomal rna small subunit methyltransferase a;
PDBTitle: structure of the dimethyladenosine transferase (ksga) from coxiella2 burnetii
73c2h1rA_
not modelled 99.2 13
PDB header:transferase
Chain: A: PDB Molecule:dimethyladenosine transferase, putative;
PDBTitle: crystal structure of a dimethyladenosine transferase from2 plasmodium falciparum
74d1m6ya2
not modelled 99.2 18
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:MraW-like putative methyltransferases
75c2esrB_
not modelled 99.2 15
PDB header:transferase
Chain: B: PDB Molecule:methyltransferase;
PDBTitle: conserved hypothetical protein- streptococcus pyogenes
76c5hjmA_
not modelled 99.2 20
PDB header:transferase
Chain: A: PDB Molecule:trna (guanine(37)-n1)-methyltransferase trm5a;
PDBTitle: crystal structure of pyrococcus abyssi trm5a complexed with mta
77d1ws6a1
not modelled 99.2 17
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:YhhF-like
78c5zvdB_
not modelled 99.2 16
PDB header:rna binding protein
Chain: B: PDB Molecule:389aa long hypothetical nucleolar protein;
PDBTitle: the crystal structure of nsun6 from pyrococcus horikoshii
79d2igta1
not modelled 99.2 13
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:hypothetical RNA methyltransferase
80d1o54a_
not modelled 99.2 24
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:tRNA(1-methyladenosine) methyltransferase-like
81c3mb5A_
not modelled 99.2 22
PDB header:transferase
Chain: A: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine
82c4dzrA_
not modelled 99.2 24
PDB header:transferase
Chain: A: PDB Molecule:protein-(glutamine-n5) methyltransferase, release factor-
PDBTitle: the crystal structure of protein-(glutamine-n5) methyltransferase2 (release factor-specific) from alicyclobacillus acidocaldarius subsp.3 acidocaldarius dsm 446
83c2yvlB_
not modelled 99.2 20
PDB header:transferase
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi from aquifex2 aeolicus
84c3a27A_
not modelled 99.2 10
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein mj1557;
PDBTitle: crystal structure of m. jannaschii tyw2 in complex with2 adomet
85d2h00a1
not modelled 99.2 12
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Methyltransferase 10 domain
86d1i9ga_
not modelled 99.2 20
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:tRNA(1-methyladenosine) methyltransferase-like
87c3p9nA_
not modelled 99.2 23
PDB header:transferase
Chain: A: PDB Molecule:possible methyltransferase (methylase);
PDBTitle: rv2966c of m. tuberculosis is a rsmd-like methyltransferase
88d1yzha1
not modelled 99.2 12
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:TrmB-like
89d2fhpa1
not modelled 99.2 18
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:YhhF-like
90c6b92A_
not modelled 99.2 16
PDB header:transferase
Chain: A: PDB Molecule:u6 small nuclear rna (adenine-(43)-n(6))-methyltransferase;
PDBTitle: crystal structure of the n-terminal domain of human mettl16 in complex2 with sah
91d1ixka_
not modelled 99.1 20
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:NOL1/NOP2/sun
92c1uwvA_
not modelled 99.1 18
PDB header:transferase
Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma;
PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase
93c2yx1A_
not modelled 99.1 19
PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein mj0883;
PDBTitle: crystal structure of m.jannaschii trna m1g37 methyltransferase
94c3g5tA_
not modelled 99.1 16
PDB header:transferase
Chain: A: PDB Molecule:trans-aconitate 3-methyltransferase;
PDBTitle: crystal structure of trans-aconitate 3-methyltransferase from yeast
95c3fteA_
not modelled 99.1 20
PDB header:transferase/rna
Chain: A: PDB Molecule:dimethyladenosine transferase;
PDBTitle: crystal structure of a. aeolicus ksga in complex with rna
96c4gc5A_
not modelled 99.1 14
PDB header:transferase
Chain: A: PDB Molecule:dimethyladenosine transferase 1, mitochondrial;
PDBTitle: crystal structure of murine tfb1m
97c3mtiA_
not modelled 99.1 18
PDB header:transferase
Chain: A: PDB Molecule:rrna methylase;
PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a
98d2esra1
not modelled 99.1 16
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:YhhF-like
99c5bxyB_
not modelled 99.1 20
PDB header:transferase
Chain: B: PDB Molecule:rna methyltransferase;
PDBTitle: crystal structure of rna methyltransferase from salinibacter ruber in2 complex with s-adenosyl-l-homocysteine
100c2pwyB_
not modelled 99.1 18
PDB header:transferase
Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase;
PDBTitle: crystal structure of a m1a58 trna methyltransferase
101c5ccbA_
not modelled 99.1 17
PDB header:transferase/rna
Chain: A: PDB Molecule:trna (adenine(58)-n(1))-methyltransferase catalytic subunit
PDBTitle: crystal structure of human m1a58 methyltransferase in a complex with2 trna3lys and sah
102d2fcaa1
not modelled 99.1 15
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:TrmB-like
103c3grzA_
not modelled 99.1 21
PDB header:transferase
Chain: A: PDB Molecule:ribosomal protein l11 methyltransferase;
PDBTitle: crystal structure of ribosomal protein l11 methylase from2 lactobacillus delbrueckii subsp. bulgaricus
104c4ineB_
not modelled 99.0 23
PDB header:transferase
Chain: B: PDB Molecule:protein pmt-2;
PDBTitle: crystal structure of n-methyl transferase (pmt-2) from caenorhabditis2 elegant complexed with s-adenosyl homocysteine and3 phosphoethanolamine
105c6j27D_
not modelled 99.0 13
PDB header:transferase
Chain: D: PDB Molecule:n(4)-bis(aminopropyl)spermidine synthase;
PDBTitle: crystal structure of the branched-chain polyamine synthase from2 thermus thermophilus (tth-bpsa) in complex with n4-3 aminopropylspermidine and 5'-methylthioadenosine
106d1l3ia_
not modelled 99.0 22
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Precorrin-6Y methyltransferase (CbiT)
107c3bt7A_
not modelled 99.0 14
PDB header:transferase/rna
Chain: A: PDB Molecule:trna (uracil-5-)-methyltransferase;
PDBTitle: structure of e. coli 5-methyluridine methyltransferase trma in complex2 with 19 nucleotide t-arm analogue
108c2yxdA_
not modelled 99.0 23
PDB header:transferase
Chain: A: PDB Molecule:probable cobalt-precorrin-6y c(15)-methyltransferase
PDBTitle: crystal structure of cobalamin biosynthesis precorrin 8w decarboxylase2 (cbit)
109c6em5q_
not modelled 99.0 12
PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l18-a;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
110c3njrB_
not modelled 99.0 17
PDB header:transferase
Chain: B: PDB Molecule:precorrin-6y methylase;
PDBTitle: crystal structure of c-terminal domain of precorrin-6y c5,15-2 methyltransferase from rhodobacter capsulatus
111c5xj2C_
not modelled 99.0 15
PDB header:transferase/rna
Chain: C: PDB Molecule:uncharacterized rna methyltransferase sp_1029;
PDBTitle: structure of sprlmcd with u747 rna
112d2nxca1
not modelled 99.0 26
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Ribosomal protein L11 methyltransferase PrmA
113c3dxyA_
not modelled 99.0 16
PDB header:transferase
Chain: A: PDB Molecule:trna (guanine-n(7)-)-methyltransferase;
PDBTitle: crystal structure of ectrmb in complex with sam
114d2b9ea1
not modelled 98.9 14
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:NOL1/NOP2/sun
115c2frxD_
not modelled 98.9 14
PDB header:transferase
Chain: D: PDB Molecule:hypothetical protein yebu;
PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli
116c3ku1E_
not modelled 98.9 16
PDB header:transferase
Chain: E: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of streptococcus pneumoniae sp1610, a putative trna2 (m1a22) methyltransferase, in complex with s-adenosyl-l-methionine
117c4krhB_
not modelled 98.9 16
PDB header:transferase
Chain: B: PDB Molecule:phosphoethanolamine n-methyltransferase 2;
PDBTitle: semet haemonchus contortus phosphoethanolamine n-methyltransferase 22 in complex with s-adenosyl-l-methionine
118c3lbfC_
not modelled 98.9 21
PDB header:transferase
Chain: C: PDB Molecule:protein-l-isoaspartate o-methyltransferase;
PDBTitle: crystal structure of protein l-isoaspartyl methyltransferase from2 escherichia coli
119c4ponB_
not modelled 98.9 15
PDB header:transferase
Chain: B: PDB Molecule:putative rna methylase;
PDBTitle: the crystal structure of a putative sam-dependent methyltransferase,2 ytqb, from bacillus subtilis
120d1prya_
not modelled 98.9 13
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Fibrillarin homologue

Binding site prediction 

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