Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2758c_(-)_3070593_3070859
DateWed Aug 7 12:50:41 BST 2019
Unique Job ID70581ac758872403
SequenceMHRGYALVVC ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.846 Y:19.818 Z:27.294
Model (left) based on template c6a7vU_
Top template information
PDB header:toxin/antitoxin
Chain: U: PDB Molecule:antitoxin vapb11;
PDBTitle: crystal structure of mycobacterium tuberculosis vapbc11 toxin-2 antitoxin complex
Confidence and coverage
Confidence: 98.0% Coverage: 53%
47 residues ( 53% of your sequence) have been modelled with 98.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6a7vU_



98.0 38
PDB header:toxin/antitoxin
Chain: U: PDB Molecule:antitoxin vapb11;
PDBTitle: crystal structure of mycobacterium tuberculosis vapbc11 toxin-2 antitoxin complex
2c1ib8A_



37.7 30
PDB header:nucleic acid binding protein
Chain: A: PDB Molecule:conserved protein sp14.3;
PDBTitle: solution structure and function of a conserved protein2 sp14.3 encoded by an essential streptococcus pneumoniae3 gene
3c3nctC_



24.3 50
PDB header:dna binding protein, chaperone
Chain: C: PDB Molecule:protein psib;
PDBTitle: x-ray crystal structure of the bacterial conjugation factor psib, a2 negative regulator of reca
4c3nvtA_



23.0 19
PDB header:transferase/isomerase
Chain: A: PDB Molecule:3-deoxy-d-arabino-heptulosonate 7-phosphate synthase;
PDBTitle: 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7-2 phosphoheptulonate synthase/chorismate mutase (aroa) from listeria3 monocytogenes egd-e
5c5gl6A_



19.3 42
PDB header:ribosomal protein
Chain: A: PDB Molecule:ribosome maturation factor rimp;
PDBTitle: msmeg rimp
6c4e6fB_



16.7 30
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4468 family protein (bacova_04320) from2 bacteroides ovatus atcc 8483 at 1.49 a resolution
7c3f5hB_



14.2 42
PDB header:protein binding
Chain: B: PDB Molecule:type i polyketide synthase pikaiii, type i polyketide
PDBTitle: crystal structure of fused docking domains from pikaiii and pikaiv of2 the pikromycin polyketide synthase
8c3lj4i_



13.8 58
PDB header:viral protein
Chain: I: PDB Molecule:portal protein;
PDBTitle: bacteriophage p22 portal protein bound to middle tail factor gp4. this2 file contain the first biological assembly
9c2k5jB_



10.7 11
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein yiif;
PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1
10c2ehoL_



10.5 27
PDB header:replication
Chain: L: PDB Molecule:gins complex subunit 3;
PDBTitle: crystal structure of human gins complex
11c2qs7D_



9.9 25
PDB header:oxidoreductase
Chain: D: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative oxidoreductase of the dsre/dsrf-like2 family (sso1126) from sulfolobus solfataricus p2 at 2.09 a resolution
12d2jfga1



9.0 38
Fold:MurCD N-terminal domain
Superfamily:MurCD N-terminal domain
Family:MurCD N-terminal domain
13c5gqsA_



7.9 44
PDB header:transport protein
Chain: A: PDB Molecule:pts galactitol transporter subunit iib;
PDBTitle: nmr based solution structure of pts system, galactitol-specific iib2 component from methicillin resistant staphylococcus aureus
14d2e9xc2



7.8 27
Fold:GINS/PriA/YqbF domain
Superfamily:PriA/YqbF domain
Family:PSF3 N-terminal domain-like
15c2l2qA_



7.2 38
PDB header:transferase
Chain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela);
PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi
16c6ajnF_



6.8 13
PDB header:toxin
Chain: F: PDB Molecule:duf1778 domain-containing protein;
PDBTitle: crystal structure of atatr bound with accoa
17d2bj7a1



6.5 20
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:CopG-like
18c6av8A_



6.2 80
PDB header:toxin
Chain: A: PDB Molecule:u5-theraphotoxin-hs1b 1;
PDBTitle: exploring cystine dense peptide space to open a unique molecular2 toolbox
19d1zbsa2



6.0 28
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:BadF/BadG/BcrA/BcrD-like
20c4nuxA_



5.8 33
PDB header:immune system
Chain: A: PDB Molecule:interleukin-17 receptor a;
PDBTitle: structure of receptor a
21d1zxoa1



not modelled 5.6 38
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:BadF/BadG/BcrA/BcrD-like
22d1sqga1



not modelled 5.4 21
Fold:NusB-like
Superfamily:NusB-like
Family:RmsB N-terminal domain-like
23c4q69B_



not modelled 5.4 26
PDB header:sugar binding protein
Chain: B: PDB Molecule:putative lipoprotein;
PDBTitle: crystal structure of a susd homolog (bt2259) from bacteroides2 thetaiotaomicron vpi-5482 at 2.50 a resolution
24c5unkA_



not modelled 5.3 19
PDB header:dna binding protein
Chain: A: PDB Molecule:sleeping beauty transposase;
PDBTitle: nmr structure of the red subdomain of the sleeping beauty transposase

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