Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2762c_(-)_3072647_3073066
DateWed Aug 7 12:50:42 BST 2019
Unique Job IDa4815cf837c10d88
SequenceMSAATAAWDR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.144 Y:30.403 Z:35.977
Model (left) based on template c5uujA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:alkz;
PDBTitle: streptomyces sahachiroi dna glycosylase alkz
Confidence and coverage
Confidence: 98.0% Coverage: 48%
67 residues ( 48% of your sequence) have been modelled with 98.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5uujA_



98.0 15
PDB header:hydrolase
Chain: A: PDB Molecule:alkz;
PDBTitle: streptomyces sahachiroi dna glycosylase alkz
2d2ae8a2



47.4 25
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Imidazole glycerol phosphate dehydratase
3d1rhya2



45.6 35
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Imidazole glycerol phosphate dehydratase
4d2f1da2



41.7 25
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Imidazole glycerol phosphate dehydratase
5c4icxA_



39.5 22
PDB header:transport protein
Chain: A: PDB Molecule:centrosomal protein of 120 kda;
PDBTitle: n-terminal c2 domain of human cep120
6c2f1dP_



37.1 25
PDB header:lyase
Chain: P: PDB Molecule:imidazoleglycerol-phosphate dehydratase 1;
PDBTitle: x-ray structure of imidazoleglycerol-phosphate dehydratase
7c1rhyB_



37.1 35
PDB header:lyase
Chain: B: PDB Molecule:imidazole glycerol phosphate dehydratase;
PDBTitle: crystal structure of imidazole glycerol phosphate dehydratase
8c2ae8C_



36.1 25
PDB header:lyase
Chain: C: PDB Molecule:imidazoleglycerol-phosphate dehydratase;
PDBTitle: crystal structure of imidazoleglycerol-phosphate dehydratase from2 staphylococcus aureus subsp. aureus n315
9c5dnlA_



31.8 30
PDB header:lyase
Chain: A: PDB Molecule:imidazoleglycerol-phosphate dehydratase;
PDBTitle: crystal structure of igpd from pyrococcus furiosus in complex with2 (s)-c348
10c4lomA_



30.8 35
PDB header:lyase
Chain: A: PDB Molecule:imidazoleglycerol-phosphate dehydratase;
PDBTitle: crystal structure of mycobacterium tuberculosis hisb in complex with2 its substrate
11c6ezmL_



29.1 35
PDB header:lyase
Chain: L: PDB Molecule:imidazoleglycerol-phosphate dehydratase;
PDBTitle: imidazoleglycerol-phosphate dehydratase from saccharomyces cerevisiae
12c2aj6A_



27.5 14
PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein mw0638;
PDBTitle: crystal structure of a putative gnat family acetyltransferase (mw0638)2 from staphylococcus aureus subsp. aureus at 1.63 a resolution
13c6fwhH_



24.0 35
PDB header:lyase
Chain: H: PDB Molecule:imidazoleglycerol-phosphate dehydratase;
PDBTitle: acanthamoeba igpd in complex with r-c348 to 1.7a resolution
14d2hfqa1



22.5 17
Fold:NE1680-like
Superfamily:NE1680-like
Family:NE1680-like
15c2hfqA_



22.5 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: nmr structure of protein ne1680 from nitrosomonas europaea:2 northeast structural genomics consortium target net5
16d2aj6a1



22.2 14
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
17d1vkoa1



20.7 10
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
18c5i0cA_



20.7 6
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein yjdj;
PDBTitle: crystal structure of predicted acyltransferase yjdj with acyl-coa n-2 acyltransferase domain from escherichia coli str. k-12
19d2ghvc1



19.1 19
Fold:SARS receptor-binding domain-like
Superfamily:SARS receptor-binding domain-like
Family:SARS receptor-binding domain-like
20c4rrcA_



17.4 20
PDB header:ligase
Chain: A: PDB Molecule:probable threonine--trna ligase 2;
PDBTitle: n-terminal editing domain of threonyl-trna synthetase from aeropyrum2 pernix with l-thr3aa (snapshot 3)
21c1j2oA_



not modelled 17.1 38
PDB header:metal binding protein
Chain: A: PDB Molecule:fusion of rhombotin-2 and lim domain-binding
PDBTitle: structure of flin2, a complex containing the n-terminal lim2 domain of lmo2 and ldb1-lid
22d1p1ja1



not modelled 16.9 11
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
23c5gyqA_



not modelled 16.3 19
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein;
PDBTitle: putative receptor-binding domain of bat-derived coronavirus hku9 spike2 protein
24c5xgrF_



not modelled 15.4 19
PDB header:viral protein
Chain: F: PDB Molecule:spike protein s1;
PDBTitle: structure of the s1 subunit c-terminal domain from bat-derived2 coronavirus hku5 spike protein
25c4qzvB_



not modelled 13.9 11
PDB header:hydrolase/viral protein
Chain: B: PDB Molecule:spike protein s1;
PDBTitle: bat-derived coronavirus hku4 uses mers-cov receptor human cd26 for2 cell entry
26c6hu9u_



not modelled 11.2 32
PDB header:oxidoreductase/electron transport
Chain: U: PDB Molecule:cytochrome b-c1 complex subunit 10;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
27c2r98A_



not modelled 10.5 17
PDB header:transferase
Chain: A: PDB Molecule:putative acetylglutamate synthase;
PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae
28c3sciE_



not modelled 9.6 20
PDB header:hydrolase/viral protein
Chain: E: PDB Molecule:spike glycoprotein;
PDBTitle: crystal structure of spike protein receptor-binding domain from a2 predicted sars coronavirus human strain complexed with human receptor3 ace2
29c3lodA_



not modelled 9.4 13
PDB header:transferase
Chain: A: PDB Molecule:putative acyl-coa n-acyltransferase;
PDBTitle: the crystal structure of the putative acyl-coa n-acyltransferase from2 klebsiella pneumoniae subsp.pneumoniae mgh 78578
30c1p1hD_



not modelled 8.8 11
PDB header:isomerase
Chain: D: PDB Molecule:inositol-3-phosphate synthase;
PDBTitle: crystal structure of the 1l-myo-inositol/nad+ complex
31c4kqzA_



not modelled 8.8 11
PDB header:viral protein
Chain: A: PDB Molecule:s protein;
PDBTitle: structure of the receptor binding domain (rbd) of mers-cov spike
32c2atmA_



not modelled 7.2 27
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronoglucosaminidase;
PDBTitle: crystal structure of the recombinant allergen ves v 2
33c1w18A_



not modelled 7.1 25
PDB header:transferase
Chain: A: PDB Molecule:levansucrase;
PDBTitle: crystal structure of levansucrase from gluconacetobacter2 diazotrophicus
34d1bwva2



not modelled 6.9 28
Fold:Ferredoxin-like
Superfamily:RuBisCO, large subunit, small (N-terminal) domain
Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase
35c2hl2A_



not modelled 6.8 22
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase;
PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase from pyrococcus abyssi in complex with an3 analog of seryladenylate
36c3d8pB_



not modelled 6.7 7
PDB header:transferase
Chain: B: PDB Molecule:acetyltransferase of gnat family;
PDBTitle: crystal structure of acetyltransferase of gnat family (np_373092.1)2 from staphylococcus aureus mu50 at 2.20 a resolution
37d1fcqa_



not modelled 6.2 27
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Bee venom hyaluronidase
38c2q0yA_



not modelled 6.1 9
PDB header:transferase
Chain: A: PDB Molecule:gcn5-related n-acetyltransferase;
PDBTitle: crystal structure of gcn5-related n-acetyltransferase (yp_295895.1)2 from ralstonia eutropha jmp134 at 1.80 a resolution
39c2eemA_



not modelled 6.1 54
PDB header:antibiotic
Chain: A: PDB Molecule:mytilin-b;
PDBTitle: solution structure of the synthetic mytilin
40c1fcuA_



not modelled 5.9 27
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronoglucosaminidase;
PDBTitle: crystal structure (trigonal) of bee venom hyaluronidase
41c2vzzA_



not modelled 5.9 13
PDB header:transferase
Chain: A: PDB Molecule:rv0802c;
PDBTitle: crystal structure of rv0802c from mycobacterium2 tuberculosis in complex with succinyl-coa
42c2pe4A_



not modelled 5.7 18
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronidase-1;
PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis
43c1vkoA_



not modelled 5.7 9
PDB header:isomerase
Chain: A: PDB Molecule:inositol-3-phosphate synthase;
PDBTitle: crystal structure of inositol-3-phosphate synthase (ce21227) from2 caenorhabditis elegans at 2.30 a resolution
44d1gk8a2



not modelled 5.7 24
Fold:Ferredoxin-like
Superfamily:RuBisCO, large subunit, small (N-terminal) domain
Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase
45c5wvxA_



not modelled 5.5 25
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:trypsin/chymotrypsin inhibitor;
PDBTitle: crystal structure of bifunctional kunitz type trypsin /amylase2 inhibitor (amtin) from the tubers of alocasia macrorrhiza
46c4rasC_



not modelled 5.4 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxidoreductase, nad-binding/iron-sulfur cluster-binding
PDBTitle: reductive dehalogenase structure suggests a mechanism for b12-2 dependent dehalogenation
47c5ys3B_



not modelled 5.4 8
PDB header:transport protein
Chain: B: PDB Molecule:succinate-acetate permease;
PDBTitle: 1.8 angstrom crystal structure of succinate-acetate permease from2 citrobacter koseri
48c2wpwA_



not modelled 5.3 12
PDB header:transferase
Chain: A: PDB Molecule:orf14;
PDBTitle: tandem gnat protein from the clavulanic acid biosynthesis pathway2 (without accoa)
49c2z5cA_



not modelled 5.1 37
PDB header:chaperone/hydrolase
Chain: A: PDB Molecule:protein ypl144w;
PDBTitle: crystal structure of a novel chaperone complex for yeast 20s2 proteasome assembly

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