Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2770c_(PPE44)_3079319_3080467
DateWed Aug 7 12:50:43 BST 2019
Unique Job ID0be612ee8f7229b0
SequenceVDFGALPPEV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.791 Y:71.054 Z:70.042
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 45%
173 residues ( 45% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 53% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 68
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1
100.0 34
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_
100.0 34
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_
100.0 19
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
98.5 17
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.7 13
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_
97.6 13
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_
97.5 16
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_
97.4 18
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.7 19
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
95.4 9
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsA_
94.5 16
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1
93.9 20
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4i0xA_
91.9 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
86.1 12
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
54.1 20
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17c1bkvA_
22.9 31
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
18c1bkvB_
21.9 31
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
19c1bkvC_
21.9 31
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
20c5frgA_
19.0 75
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
21c2ke4A_
not modelled 12.1 75
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
22c3a1iA_
not modelled 11.1 43
PDB header:hydrolase
Chain: A: PDB Molecule:amidase;
PDBTitle: crystal structure of rhodococcus sp. n-771 amidase complexed2 with benzamide
23c3a2qA_
not modelled 8.7 29
PDB header:hydrolase
Chain: A: PDB Molecule:6-aminohexanoate-cyclic-dimer hydrolase;
PDBTitle: structure of 6-aminohexanoate cyclic dimer hydrolase complexed with2 substrate
24d1mt5a_
not modelled 8.5 43
Fold:Amidase signature (AS) enzymes
Superfamily:Amidase signature (AS) enzymes
Family:Amidase signature (AS) enzymes
25c2iu1A_
not modelled 8.4 17
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
26d1ui5a2
not modelled 8.3 20
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
27c1vytF_
not modelled 8.0 50
PDB header:transport protein
Chain: F: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
28d1zeea1
not modelled 7.9 36
Fold:Indolic compounds 2,3-dioxygenase-like
Superfamily:Indolic compounds 2,3-dioxygenase-like
Family:Indoleamine 2,3-dioxygenase-like
29c2fulE_
not modelled 7.8 28
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
30c4lzxB_
not modelled 7.7 38
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-free cam
31c3trhI_
not modelled 7.6 21
PDB header:lyase
Chain: I: PDB Molecule:phosphoribosylaminoimidazole carboxylase
PDBTitle: structure of a phosphoribosylaminoimidazole carboxylase catalytic2 subunit (pure) from coxiella burnetii
32c3sjrB_
not modelled 7.2 6
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
33c2lkqA_
not modelled 7.1 44
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
34c2y5tG_
not modelled 6.7 33
PDB header:immune system
Chain: G: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
35c4issA_
not modelled 6.7 29
PDB header:hydrolase
Chain: A: PDB Molecule:allophanate hydrolase;
PDBTitle: semet-substituted kluyveromyces lactis allophanate hydrolase
36c3kfuE_
not modelled 6.7 43
PDB header:ligase/rna
Chain: E: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit a;
PDBTitle: crystal structure of the transamidosome
37c4gyxC_
not modelled 6.6 27
PDB header:structural protein, blood clotting
Chain: C: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
38c4gyxB_
not modelled 6.6 27
PDB header:structural protein, blood clotting
Chain: B: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
39c4gyxA_
not modelled 6.6 27
PDB header:structural protein, blood clotting
Chain: A: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
40c4dmtB_
not modelled 6.6 23
PDB header:structural protein
Chain: B: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
41c4dmtA_
not modelled 6.6 23
PDB header:structural protein
Chain: A: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
42c4dmtC_
not modelled 6.6 23
PDB header:structural protein
Chain: C: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
43c4gysA_
not modelled 6.6 36
PDB header:hydrolase
Chain: A: PDB Molecule:allophanate hydrolase;
PDBTitle: granulibacter bethesdensis allophanate hydrolase co-crystallized with2 malonate
44d1ocka_
not modelled 6.5 29
Fold:Amidase signature (AS) enzymes
Superfamily:Amidase signature (AS) enzymes
Family:Amidase signature (AS) enzymes
45c1vytE_
not modelled 6.5 50
PDB header:transport protein
Chain: E: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
46c2y5tE_
not modelled 6.4 33
PDB header:immune system
Chain: E: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
47c4m1lB_
not modelled 6.3 43
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-bound cam
48c2kg7A_
not modelled 6.2 24
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
49d2gi3a1
not modelled 6.2 36
Fold:Amidase signature (AS) enzymes
Superfamily:Amidase signature (AS) enzymes
Family:Amidase signature (AS) enzymes
50c4dexB_
not modelled 6.1 38
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent n-type calcium channel subunit alpha-1b;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav2.2 i-ii linker.
51c4i6jB_
not modelled 6.0 33
PDB header:transcription
Chain: B: PDB Molecule:f-box/lrr-repeat protein 3;
PDBTitle: a ubiquitin ligase-substrate complex
52c6dzsD_
not modelled 6.0 38
PDB header:oxidoreductase
Chain: D: PDB Molecule:homoserine dehydrogenase;
PDBTitle: mycobacterial homoserine dehydrogenase thra in complex with nadp
53c4mveB_
not modelled 6.0 24
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of tcur_1030 protein from thermomonospora curvata
54c5h6sB_
not modelled 6.0 21
PDB header:hydrolase
Chain: B: PDB Molecule:amidase;
PDBTitle: crystal structure of hydrazidase s179a mutant complexed with a2 substrate
55d1vlfn1
not modelled 5.9 60
Fold:Prealbumin-like
Superfamily:Cna protein B-type domain
Family:Cna protein B-type domain
56c2y5tF_
not modelled 5.8 33
PDB header:immune system
Chain: F: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
57c4grdA_
not modelled 5.7 32
PDB header:lyase,isomerase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit;
PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase2 catalytic subunit from burkholderia cenocepacia j2315
58c1bzgA_
not modelled 5.6 0
PDB header:hormone
Chain: A: PDB Molecule:parathyroid hormone-related protein;
PDBTitle: the solution structure of human parathyroid hormone-related2 protein (1-34) in near-physiological solution, nmr, 303 structures
59c6a0aA_
not modelled 5.6 25
PDB header:structural protein
Chain: A: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
60c2wuhD_
not modelled 5.6 33
PDB header:receptor/peptide
Chain: D: PDB Molecule:collagen peptide;
PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide
61c2vyaB_
not modelled 5.6 43
PDB header:hydrolase
Chain: B: PDB Molecule:fatty-acid amide hydrolase 1;
PDBTitle: crystal structure of fatty acid amide hydrolase conjugated2 with the drug-like inhibitor pf-750
62c3h0rP_
not modelled 5.6 36
PDB header:ligase
Chain: P: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit a;
PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus
63c3juiA_
not modelled 5.5 23
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b subunit epsilon;
PDBTitle: crystal structure of the c-terminal domain of human translation2 initiation factor eif2b epsilon subunit
64c6nbiP_
not modelled 5.5 80
PDB header:signaling protein
Chain: P: PDB Molecule:long-acting parathyroid hormone analog;
PDBTitle: cryo-em structure of parathyroid hormone receptor type 1 in complex2 with a long-acting parathyroid hormone analog and g protein
65c2i94B_
not modelled 5.4 67
PDB header:protein binding
Chain: B: PDB Molecule:rhodopsin kinase;
PDBTitle: nmr structure of recoverin bound to rhodopsin kinase
66c2dc0A_
not modelled 5.4 29
PDB header:hydrolase
Chain: A: PDB Molecule:probable amidase;
PDBTitle: crystal structure of amidase
67c5l85B_
not modelled 5.4 9
PDB header:signaling protein
Chain: B: PDB Molecule:nuclear fragile x mental retardation-interacting protein 1;
PDBTitle: solution structure of the complex between human znhit3 and nufip12 proteins
68c2wuhC_
not modelled 5.4 33
PDB header:receptor/peptide
Chain: C: PDB Molecule:collagen peptide;
PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide
69c2wuhB_
not modelled 5.4 33
PDB header:receptor/peptide
Chain: B: PDB Molecule:collagen peptide;
PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide
70c4auoE_
not modelled 5.4 33
PDB header:hydrolase/peptide
Chain: E: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
71c4auoH_
not modelled 5.4 33
PDB header:hydrolase/peptide
Chain: H: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
72c1t0jC_
not modelled 5.3 57
PDB header:signaling protein
Chain: C: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit;
PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
73c6a0cB_
not modelled 5.3 25
PDB header:structural protein
Chain: B: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
74c6c6gA_
not modelled 5.3 29
PDB header:hydrolase
Chain: A: PDB Molecule:biuret hydrolase;
PDBTitle: an unexpected vestigial protein complex reveals the evolutionary2 origins of an s-triazine catabolic enzyme. inhibitor bound complex.
75d1khba2
not modelled 5.2 30
Fold:PEP carboxykinase N-terminal domain
Superfamily:PEP carboxykinase N-terminal domain
Family:PEP carboxykinase N-terminal domain
76c5lzkB_
not modelled 5.2 4
PDB header:structural genomics
Chain: B: PDB Molecule:protein fam83b;
PDBTitle: structure of the domain of unknown function duf1669 from human fam83b
77c6q5lA_
not modelled 5.1 18
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24h;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24h
78c1qsuC_
not modelled 5.1 25
PDB header:structural protein
Chain: C: PDB Molecule:protein ((pro-hyp-gly)4- glu-lys-gly(pro-hyp-gly)5);
PDBTitle: crystal structure of the triple-helical collagen-like peptide, (pro-2 hyp-gly)4-glu-lys-gly(pro-hyp-gly)5
79c1paqA_
not modelled 5.1 12
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b epsilon
PDBTitle: crystal structure of the catalytic fragment of eukaryotic2 initiation factor 2b epsilon
80d1paqa_
not modelled 5.1 12
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like
81c6q5hA_
not modelled 5.1 18
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24d;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24d
82c6q5iB_
not modelled 5.0 18
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24e
83c6q5mB_
not modelled 5.0 18
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24dab;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24dab
84c2drxB_
not modelled 5.0 33
PDB header:structural protein
Chain: B: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-(log)2-(pog)4

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below