Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2784c_(lppU)_3092961_3093476
DateWed Aug 7 12:50:44 BST 2019
Unique Job ID2d456e6cd7f9f75f
SequenceMRAWLAAATT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.662 Y:40.919 Z:24.550
Model (left) based on template c2m5sA_
Top template information
PDB header:viral protein
Chain: A: PDB Molecule:coat protein;
PDBTitle: high-resolution nmr structure and cryo-em imaging support multiple2 functional roles for the accessory i-domain of phage p22 coat protein
Confidence and coverage
Confidence: 24.6% Coverage: 27%
46 residues ( 27% of your sequence) have been modelled with 24.6% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2m5sA_



24.6 28
PDB header:viral protein
Chain: A: PDB Molecule:coat protein;
PDBTitle: high-resolution nmr structure and cryo-em imaging support multiple2 functional roles for the accessory i-domain of phage p22 coat protein
2c3heiF_



13.2 16
PDB header:transferase/signaling protein
Chain: F: PDB Molecule:ephrin-a1;
PDBTitle: ligand recognition by a-class eph receptors: crystal structures of the2 epha2 ligand-binding domain and the epha2/ephrin-a1 complex
3c3czuB_



11.5 16
PDB header:transferase/signaling protein
Chain: B: PDB Molecule:ephrin-a1;
PDBTitle: crystal structure of the human ephrin a2- ephrin a1 complex
4c3g74B_



11.3 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein of unknown function;
PDBTitle: crystal structure of a functionally unknown protein from eubacterium2 ventriosum atcc 27560
5c2wo3B_



7.8 11
PDB header:transferase/signaling protein
Chain: B: PDB Molecule:ephrin-a2;
PDBTitle: crystal structure of the epha4-ephrina2 complex
6c5zz9E_



5.3 8
PDB header:protein binding
Chain: E: PDB Molecule:peptide from drebrin;
PDBTitle: crystal structure of homer2 evh1/drebrin ppxxf complex

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite