1 c1k8wA_
100.0
34
PDB header: lyase/rnaChain: A: PDB Molecule: trna pseudouridine synthase b;PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna
2 c1sgvA_
100.0
93
PDB header: lyaseChain: A: PDB Molecule: trna pseudouridine synthase b;PDBTitle: structure of trna psi55 pseudouridine synthase (trub)
3 d1k8wa5
100.0
40
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase II TruB
4 d1r3ea2
100.0
38
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase II TruB
5 c2ey4A_
100.0
31
PDB header: isomerase/biosynthetic proteinChain: A: PDB Molecule: probable trna pseudouridine synthase b;PDBTitle: crystal structure of a cbf5-nop10-gar1 complex
6 c3uaiA_
100.0
32
PDB header: isomerase/chaperoneChain: A: PDB Molecule: h/aca ribonucleoprotein complex subunit 4;PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae
7 c2apoA_
100.0
35
PDB header: isomerase/rna binding proteinChain: A: PDB Molecule: probable trna pseudouridine synthase b;PDBTitle: crystal structure of the methanococcus jannaschii cbf52 nop10 complex
8 d1sgva2
100.0
92
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase II TruB
9 d2ey4a2
100.0
38
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase II TruB
10 c1ze2B_
100.0
38
PDB header: lyase/rnaChain: B: PDB Molecule: trna pseudouridine synthase b;PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate
11 d2apoa2
100.0
41
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase II TruB
12 c2omlA_
99.2
16
PDB header: isomeraseChain: A: PDB Molecule: ribosomal large subunit pseudouridine synthase e;PDBTitle: crystal structure of e. coli pseudouridine synthase rlue
13 c2olwB_
98.6
17
PDB header: isomeraseChain: B: PDB Molecule: ribosomal large subunit pseudouridine synthase e;PDBTitle: crystal structure of e. coli pseudouridine synthase rlue
14 d1sgva1
97.9
100
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
15 d1kska4
97.9
24
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase RsuA/RluD
16 d1k8wa3
97.9
16
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
17 d1vioa1
97.9
18
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase RsuA/RluD
18 c3dh3C_
97.8
25
PDB header: isomerase/rnaChain: C: PDB Molecule: ribosomal large subunit pseudouridine synthase f;PDBTitle: crystal structure of rluf in complex with a 22 nucleotide rna2 substrate
19 c2v9kA_
97.7
23
PDB header: lyaseChain: A: PDB Molecule: uncharacterized protein flj32312;PDBTitle: crystal structure of human pus10, a novel pseudouridine2 synthase.
20 c2gmlA_
97.7
25
PDB header: isomeraseChain: A: PDB Molecule: ribosomal large subunit pseudouridine synthase f;PDBTitle: crystal structure of catalytic domain of e.coli rluf
21 c4lgtA_
not modelled
97.6
28
PDB header: isomerase/rnaChain: A: PDB Molecule: ribosomal large subunit pseudouridine synthase b;PDBTitle: crystal structure of the catalytic domain of rlub in complex with a2 21-nucleotide rna substrate
22 d1v9ka_
not modelled
97.3
25
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase RsuA/RluD
23 c1qyuA_
not modelled
97.2
24
PDB header: lyaseChain: A: PDB Molecule: ribosomal large subunit pseudouridine synthase d;PDBTitle: structure of the catalytic domain of 23s rrna pseudouridine2 synthase rlud
24 c3zv0D_
not modelled
97.2
21
PDB header: cell cycleChain: D: PDB Molecule: h/aca ribonucleoprotein complex subunit 4;PDBTitle: structure of the shq1p-cbf5p complex
25 c1vioA_
not modelled
97.2
21
PDB header: lyaseChain: A: PDB Molecule: ribosomal small subunit pseudouridine synthase a;PDBTitle: crystal structure of pseudouridylate synthase
26 c1kskA_
not modelled
97.1
23
PDB header: lyaseChain: A: PDB Molecule: ribosomal small subunit pseudouridine synthase a;PDBTitle: structure of rsua
27 c5ubaA_
not modelled
97.1
26
PDB header: rna binding proteinChain: A: PDB Molecule: rna pseudouridylate synthase domain-containing protein 4;PDBTitle: human rna pseudouridylate synthase domain containing 4
28 c2istA_
not modelled
97.1
23
PDB header: isomeraseChain: A: PDB Molecule: ribosomal large subunit pseudouridine synthase d;PDBTitle: crystal structure of rlud from e. coli
29 d1v9fa_
not modelled
97.0
24
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: Pseudouridine synthase RsuA/RluD
30 c1v9fA_
not modelled
97.0
24
PDB header: lyaseChain: A: PDB Molecule: ribosomal large subunit pseudouridine synthase d;PDBTitle: crystal structure of catalytic domain of pseudouridine2 synthase rlud from escherichia coli
31 c2i82D_
not modelled
97.0
26
PDB header: lyase/rnaChain: D: PDB Molecule: ribosomal large subunit pseudouridine synthase a;PDBTitle: crystal structure of pseudouridine synthase rlua: indirect2 sequence readout through protein-induced rna structure
32 c5vbbA_
not modelled
97.0
17
PDB header: rna binding proteinChain: A: PDB Molecule: rna pseudouridylate synthase domain-containing protein 1;PDBTitle: human rna pseudouridylate synthase domain containing 1
33 d2apoa1
not modelled
96.2
17
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
34 d2ey4a1
not modelled
95.5
21
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
35 d1r3ea1
not modelled
93.9
17
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
36 d1szwa_
not modelled
89.1
16
Fold: Pseudouridine synthaseSuperfamily: Pseudouridine synthaseFamily: tRNA pseudouridine synthase TruD
37 c1sb7A_
not modelled
88.9
16
PDB header: lyaseChain: A: PDB Molecule: trna pseudouridine synthase d;PDBTitle: crystal structure of the e.coli pseudouridine synthase trud
38 c3m4xA_
not modelled
84.8
12
PDB header: transferaseChain: A: PDB Molecule: nol1/nop2/sun family protein;PDBTitle: structure of a ribosomal methyltransferase
39 c1z2zB_
not modelled
82.9
31
PDB header: lyaseChain: B: PDB Molecule: probable trna pseudouridine synthase d;PDBTitle: crystal structure of the putative trna pseudouridine synthase d (trud)2 from methanosarcina mazei, northeast structural genomics target mar1
40 c5kkpA_
not modelled
81.3
13
PDB header: isomeraseChain: A: PDB Molecule: pseudouridylate synthase 7;PDBTitle: crystal structure of human pseudouridylate synthase 7
41 d1iq8a3
not modelled
76.2
17
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
42 c1q7hA_
not modelled
73.8
23
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: conserved hypothetical protein;PDBTitle: structure of a conserved pua domain protein from thermoplasma2 acidophilum
43 d2a2pa1
not modelled
63.2
26
Fold: Thioredoxin foldSuperfamily: Thioredoxin-likeFamily: Selenoprotein W-related
44 d1q7ha1
not modelled
59.9
24
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
45 c2b78A_
not modelled
59.3
7
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein smu.776;PDBTitle: a putative sam-dependent methyltransferase from streptococcus mutans
46 c2frxD_
not modelled
59.3
22
PDB header: transferaseChain: D: PDB Molecule: hypothetical protein yebu;PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli
47 c3d79A_
not modelled
59.2
23
PDB header: unknown functionChain: A: PDB Molecule: putative uncharacterized protein ph0734;PDBTitle: crystal structure of hypothetical protein ph0734.1 from2 hyperthermophilic archaea pyrococcus horikoshii ot3
48 c3m6wA_
not modelled
58.6
20
PDB header: transferaseChain: A: PDB Molecule: rrna methylase;PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine
49 d2as0a1
not modelled
55.2
15
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: Hypothetical RNA methyltransferase domain (HRMD)
50 d2b78a1
not modelled
52.8
10
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: Hypothetical RNA methyltransferase domain (HRMD)
51 c6em5l_
not modelled
47.1
5
PDB header: ribosomeChain: L: PDB Molecule: 60s ribosomal protein l13-a;PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
52 c1iq8B_
not modelled
45.9
17
PDB header: transferaseChain: B: PDB Molecule: archaeosine trna-guanine transglycosylase;PDBTitle: crystal structure of archaeosine trna-guanine transglycosylase from2 pyrococcus horikoshii
53 c1zs7A_
not modelled
23.5
23
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein ape0525;PDBTitle: the structure of gene product ape0525 from aeropyrum pernix
54 c5ey0A_
not modelled
23.0
57
PDB header: transcriptionChain: A: PDB Molecule: gtp-sensing transcriptional pleiotropic repressor cody;PDBTitle: crystal structure of cody from staphylococcus aureus with gtp and ile
55 d1lzia_
not modelled
22.8
26
Fold: Nucleotide-diphospho-sugar transferasesSuperfamily: Nucleotide-diphospho-sugar transferasesFamily: alpha-1,3-galactosyltransferase-like
56 d1k7ia2
not modelled
22.3
39
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Serralysin-like metalloprotease, catalytic (N-terminal) domain
57 d1r9ha_
not modelled
21.5
18
Fold: FKBP-likeSuperfamily: FKBP-likeFamily: FKBP immunophilin/proline isomerase
58 c4ayjA_
not modelled
21.0
16
PDB header: transferaseChain: A: PDB Molecule: bogt - metal-independent glycosyltransferase;PDBTitle: molecular structure of a metal-independent bacterial2 glycosyltransferase that catalyzes the synthesis of histo-blood group3 a antigen
59 d1g9ka2
not modelled
20.4
39
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Serralysin-like metalloprotease, catalytic (N-terminal) domain
60 c3r90E_
not modelled
18.4
11
PDB header: rna binding proteinChain: E: PDB Molecule: malignant t cell-amplified sequence 1;PDBTitle: crystal structure of malignant t cell-amplified sequence 1 protein
61 c3lfmA_
not modelled
18.4
40
PDB header: oxidoreductaseChain: A: PDB Molecule: protein fto;PDBTitle: crystal structure of the fat mass and obesity associated (fto) protein2 reveals basis for its substrate specificity
62 d2gx8a1
not modelled
17.8
17
Fold: NIF3 (NGG1p interacting factor 3)-likeSuperfamily: NIF3 (NGG1p interacting factor 3)-likeFamily: NIF3 (NGG1p interacting factor 3)-like
63 c2vg2C_
not modelled
17.6
15
PDB header: transferaseChain: C: PDB Molecule: undecaprenyl pyrophosphate synthetase;PDBTitle: rv2361 with ipp
64 c3czxA_
not modelled
17.3
50
PDB header: hydrolaseChain: A: PDB Molecule: putative n-acetylmuramoyl-l-alanine amidase;PDBTitle: the crystal structure of the putative n-acetylmuramoyl-l-2 alanine amidase from neisseria meningitidis
65 d1muga_
not modelled
17.3
19
Fold: Uracil-DNA glycosylase-likeSuperfamily: Uracil-DNA glycosylase-likeFamily: Mug-like
66 d2jn9a1
not modelled
16.7
16
Fold: Split barrel-likeSuperfamily: YkvR-likeFamily: YkvR-like
67 d1sata2
not modelled
16.6
33
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Serralysin-like metalloprotease, catalytic (N-terminal) domain
68 d2fug21
not modelled
16.3
11
Fold: Thioredoxin foldSuperfamily: Thioredoxin-likeFamily: NQO2-like
69 c2lgoA_
not modelled
16.1
20
PDB header: isomeraseChain: A: PDB Molecule: fkbp;PDBTitle: solution nmr structure of a fkbp-type peptidyl-prolyl cis-trans2 isomerase from giardia lamblia, seattle structural genomics center3 for infectious disease target gilaa.00840.a
70 d3saka_
not modelled
15.5
17
Fold: p53 tetramerization domainSuperfamily: p53 tetramerization domainFamily: p53 tetramerization domain
71 c5n9jA_
not modelled
15.2
15
PDB header: transcriptionChain: A: PDB Molecule: mediator of rna polymerase ii transcription subunit 14;PDBTitle: core mediator of transcriptional regulation
72 c2gx8B_
not modelled
15.0
17
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: nif3-related protein;PDBTitle: the crystal structure of bacillus cereus protein related to nif3
73 c4dmgA_
not modelled
14.4
21
PDB header: transferaseChain: A: PDB Molecule: putative uncharacterized protein ttha1493;PDBTitle: thermus thermophilus m5c1942 methyltransferase rlmo
74 d2cx1a1
not modelled
14.3
22
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: PUA domain
75 c3c7tB_
not modelled
13.3
31
PDB header: hydrolaseChain: B: PDB Molecule: ecdysteroid-phosphate phosphatase;PDBTitle: crystal structure of the ecdysone phosphate phosphatase, eppase, from2 bombix mori in complex with tungstate
76 c1sqwA_
not modelled
12.7
8
PDB header: unknown functionChain: A: PDB Molecule: saccharomyces cerevisiae nip7p homolog;PDBTitle: crystal structure of kd93, a novel protein expressed in the2 human pro
77 d1kapp2
not modelled
12.6
39
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Serralysin-like metalloprotease, catalytic (N-terminal) domain
78 c5u0pN_
not modelled
12.1
15
PDB header: transcriptionChain: N: PDB Molecule: mediator complex subunit 14;PDBTitle: cryo-em structure of the transcriptional mediator
79 d1g5ua_
not modelled
12.0
14
Fold: Profilin-likeSuperfamily: Profilin (actin-binding protein)Family: Profilin (actin-binding protein)
80 c1mszA_
not modelled
11.7
14
PDB header: dna binding proteinChain: A: PDB Molecule: dna-binding protein smubp-2;PDBTitle: solution structure of the r3h domain from human smubp-2
81 d1msza_
not modelled
11.7
14
Fold: IF3-likeSuperfamily: R3H domainFamily: R3H domain
82 d1t8sa_
not modelled
11.7
21
Fold: Phosphorylase/hydrolase-likeSuperfamily: Purine and uridine phosphorylasesFamily: Purine and uridine phosphorylases
83 c3vseA_
not modelled
11.7
15
PDB header: transferaseChain: A: PDB Molecule: putative uncharacterized protein;PDBTitle: crystal structure of methyltransferase
84 d3nula_
not modelled
11.3
17
Fold: Profilin-likeSuperfamily: Profilin (actin-binding protein)Family: Profilin (actin-binding protein)
85 c1pk1B_
not modelled
11.2
18
PDB header: transcription repressionChain: B: PDB Molecule: sex comb on midleg cg9495-pa;PDBTitle: hetero sam domain structure of ph and scm.
86 c4binA_
not modelled
11.2
50
PDB header: hydrolaseChain: A: PDB Molecule: n-acetylmuramoyl-l-alanine amidase amic;PDBTitle: crystal structure of the e. coli n-acetylmuramoyl-l-alanine amidase2 amic
87 c2nydB_
not modelled
11.1
15
PDB header: unknown functionChain: B: PDB Molecule: upf0135 protein sa1388;PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388
88 c4uwqK_
not modelled
11.0
20
PDB header: hydrolaseChain: K: PDB Molecule: soxy protein;PDBTitle: crystal structure of the disulfide-linked complex of the2 thiosulfodyrolase soxb with the carrier-protein soxyz from3 thermus thermophilus
89 c2xs4A_
not modelled
11.0
33
PDB header: hydrolaseChain: A: PDB Molecule: karilysin protease;PDBTitle: structure of karilysin catalytic mmp domain in complex with magnesium
90 d1bqqm_
not modelled
11.0
37
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
91 c3dnhB_
not modelled
10.9
17
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: uncharacterized protein atu2129;PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58
92 d1o7qa_
not modelled
10.8
21
Fold: Nucleotide-diphospho-sugar transferasesSuperfamily: Nucleotide-diphospho-sugar transferasesFamily: alpha-1,3-galactosyltransferase-like
93 d3blhb1
not modelled
10.7
17
Fold: Cyclin-likeSuperfamily: Cyclin-likeFamily: Cyclin
94 c3ne8A_
not modelled
10.6
50
PDB header: hydrolaseChain: A: PDB Molecule: n-acetylmuramoyl-l-alanine amidase;PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1
95 d1cgla_
not modelled
10.4
28
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
96 d2ovxa1
not modelled
10.4
33
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
97 d2gy9i1
not modelled
10.1
16
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Translational machinery components
98 d1hv5a_
not modelled
10.1
33
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
99 d2vqei1
not modelled
9.5
25
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Translational machinery components
