Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2813_(-)_3118234_3119046
DateWed Aug 7 12:50:47 BST 2019
Unique Job ID4ceb42febbf1a0c7
SequenceMMHKLISYYG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:70.501 Y:43.007 Z:51.233
Model (left) based on template d1fnna2
Top template information
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
Confidence and coverage
Confidence: 99.9% Coverage: 95%
257 residues ( 95% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1fnna2
99.9 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
2d1w5sa2
99.9 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
3c2z4rB_
99.8 12
PDB header:dna binding protein
Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa
4c5zr1A_
99.8 17
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: saccharomyces cerevisiae origin recognition complex bound to a 72-bp2 origin dna containing acs and b1 element
5c1fnnB_
99.7 15
PDB header:cell cycle
Chain: B: PDB Molecule:cell division control protein 6;
PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
6c6blbA_
99.7 18
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 1.88 angstrom resolution crystal structure holliday junction atp-2 dependent dna helicase (ruvb) from pseudomonas aeruginosa in complex3 with adp
7c1in8A_
99.7 20
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction dna helicase ruvb;
PDBTitle: thermotoga maritima ruvb t158v
8d1in4a2
99.7 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
9c3pfiB_
99.7 20
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
10c1w5sB_
99.7 20
PDB header:replication
Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2;
PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form)
11c6nyyC_
99.7 17
PDB header:translocase
Chain: C: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
12c2c9oA_
99.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
13c6genX_
99.7 21
PDB header:nuclear protein
Chain: X: PDB Molecule:ruvb-like protein 1;
PDBTitle: chromatin remodeller-nucleosome complex at 4.5 a resolution.
14d1ixsb2
99.7 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
15c4b4tL_
99.7 15
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
16d1njfa_
99.7 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
17c2c9oC_
99.7 14
PDB header:hydrolase
Chain: C: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
18c3te6A_
99.7 12
PDB header:gene regulation
Chain: A: PDB Molecule:regulatory protein sir3;
PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
19c3uk6H_
99.7 12
PDB header:hydrolase
Chain: H: PDB Molecule:ruvb-like 2;
PDBTitle: crystal structure of the tip48 (tip49b) hexamer
20c4b4tI_
99.7 15
PDB header:hydrolase
Chain: I: PDB Molecule:26s protease regulatory subunit 4 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
21c6epdM_
not modelled 99.7 12
PDB header:hydrolase
Chain: M: PDB Molecule:26s proteasome regulatory subunit 6a;
PDBTitle: substrate processing state 26s proteasome (sps1)
22d1sxjd2
not modelled 99.7 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
23c5oafB_
not modelled 99.7 17
PDB header:gene regulation
Chain: B: PDB Molecule:ruvb-like 2;
PDBTitle: human rvb1/rvb2 heterohexamer in ino80 complex
24c2qbyA_
not modelled 99.7 14
PDB header:replication/dna
Chain: A: PDB Molecule:cell division control protein 6 homolog 1;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
25c6epcJ_
not modelled 99.6 16
PDB header:hydrolase
Chain: J: PDB Molecule:26s proteasome regulatory subunit 8;
PDBTitle: ground state 26s proteasome (gs2)
26c5gjqL_
not modelled 99.6 17
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease regulatory subunit 10b;
PDBTitle: structure of the human 26s proteasome bound to usp14-ubal
27c2v1uA_
not modelled 99.6 16
PDB header:replication
Chain: A: PDB Molecule:cell division control protein 6 homolog;
PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
28c4b4tJ_
not modelled 99.6 15
PDB header:hydrolase
Chain: J: PDB Molecule:26s protease regulatory subunit 8 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
29c4b4tH_
not modelled 99.6 16
PDB header:hydrolase
Chain: H: PDB Molecule:26s protease regulatory subunit 7 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
30c2dhrC_
not modelled 99.6 17
PDB header:hydrolase
Chain: C: PDB Molecule:ftsh;
PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
31c4b4tM_
not modelled 99.6 17
PDB header:hydrolase
Chain: M: PDB Molecule:26s protease regulatory subunit 6a;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
32c3bosA_
not modelled 99.6 15
PDB header:hydrolase regulator,dna binding protein
Chain: A: PDB Molecule:putative dna replication factor;
PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
33c5mpaL_
not modelled 99.6 14
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: 26s proteasome in presence of atp (s2)
34d1ny5a2
not modelled 99.6 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
35c6hecH_
not modelled 99.6 15
PDB header:hydrolase
Chain: H: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: pan-proteasome in state 4
36c3h4mC_
not modelled 99.6 13
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase
37c4ww4A_
not modelled 99.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
38d2ce7a2
not modelled 99.6 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
39c4b4tK_
not modelled 99.6 13
PDB header:hydrolase
Chain: K: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
40c1hqcB_
not modelled 99.6 18
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb;
PDBTitle: structure of ruvb from thermus thermophilus hb8
41c6nyyA_
not modelled 99.6 16
PDB header:translocase
Chain: A: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
42c5t0gA_
not modelled 99.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:26s protease regulatory subunit 7;
PDBTitle: structural basis for dynamic regulation of the human 26s proteasome
43c2ce7B_
not modelled 99.6 18
PDB header:cell division protein
Chain: B: PDB Molecule:cell division protein ftsh;
PDBTitle: edta treated
44c3pvsA_
not modelled 99.6 14
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
45c5e7pA_
not modelled 99.6 19
PDB header:hydrolase
Chain: A: PDB Molecule:cell division control protein cdc48;
PDBTitle: crystal structure of msmeg_0858 (uniprot a0qqs4), a aaa atpase.
46d1sxjc2
not modelled 99.6 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
47c2chgB_
not modelled 99.6 19
PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
48d1iqpa2
not modelled 99.6 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
49c1iy2A_
not modelled 99.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh;
PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus
50c5udb9_
not modelled 99.6 14
PDB header:replication
Chain: 9: PDB Molecule:cell division control protein 6;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
51c6qi8E_
not modelled 99.6 14
PDB header:chaperone
Chain: E: PDB Molecule:ruvb-like 2;
PDBTitle: truncated human r2tp complex, structure 3 (adp-filled)
52c1xxhB_
not modelled 99.6 18
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
53c5ubvB_
not modelled 99.6 16
PDB header:hydrolase
Chain: B: PDB Molecule:atpase domain of i-aaa protease;
PDBTitle: atpase domain of i-aaa protease from myceliophthora thermophila
54d2fnaa2
not modelled 99.6 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
55c4z8xC_
not modelled 99.6 16
PDB header:hydrolase
Chain: C: PDB Molecule:atp-dependent zinc metalloprotease ftsh;
PDBTitle: truncated ftsh from a. aeolicus
56d1ixza_
not modelled 99.6 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
57d1sxja2
not modelled 99.6 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
58d1sxjb2
not modelled 99.6 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
59c6az0A_
not modelled 99.5 20
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial inner membrane i-aaa protease supercomplex
PDBTitle: mitochondrial atpase protease yme1
60c5ep4A_
not modelled 99.5 16
PDB header:transcription
Chain: A: PDB Molecule:putative repressor protein luxo;
PDBTitle: structure, regulation, and inhibition of the quorum-sensing signal2 integrator luxo
61c5g4gF_
not modelled 99.5 20
PDB header:hydrolase
Chain: F: PDB Molecule:vcp-like atpase;
PDBTitle: structure of the atpgs-bound vat complex
62d1lv7a_
not modelled 99.5 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
63c1ojlF_
not modelled 99.5 15
PDB header:response regulator
Chain: F: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
64d1r6bx2
not modelled 99.5 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
65d1a5ta2
not modelled 99.5 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
66c3b9pA_
not modelled 99.5 14
PDB header:hydrolase
Chain: A: PDB Molecule:cg5977-pa, isoform a;
PDBTitle: spastin
67c5uj7C_
not modelled 99.5 12
PDB header:dna binding protein
Chain: C: PDB Molecule:origin recognition complex subunit 4;
PDBTitle: structure of the active form of human origin recognition complex2 atpase motor module, complex subunits 1, 4, 5
68c3hu2C_
not modelled 99.5 18
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs
69c1xwiA_
not modelled 99.5 15
PDB header:protein transport
Chain: A: PDB Molecule:skd1 protein;
PDBTitle: crystal structure of vps4b
70c1sxjA_
not modelled 99.5 18
PDB header:replication
Chain: A: PDB Molecule:activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
71c2qbyB_
not modelled 99.5 13
PDB header:replication/dna
Chain: B: PDB Molecule:cell division control protein 6 homolog 3;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
72c5exsA_
not modelled 99.5 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator fleq;
PDBTitle: aaa+ atpase fleq from pseudomonas aeruginosa bound to atp-gamma-s
73c4l16A_
not modelled 99.5 20
PDB header:hydrolase
Chain: A: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of figl-1 aaa domain in complex with adp
74c2qenA_
not modelled 99.5 14
PDB header:unknown function
Chain: A: PDB Molecule:walker-type atpase;
PDBTitle: the walker-type atpase paby2304 of pyrococcus abyssi
75c2x8aA_
not modelled 99.5 16
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear valosin-containing protein-like;
PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain
76c3cf1C_
not modelled 99.5 14
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
77c2zamA_
not modelled 99.5 14
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b;
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
78c3vfdA_
not modelled 99.5 16
PDB header:hydrolase
Chain: A: PDB Molecule:spastin;
PDBTitle: human spastin aaa domain
79c4ww4B_
not modelled 99.5 18
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb-like 2;
PDBTitle: double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
80c1s3sA_
not modelled 99.5 15
PDB header:protein binding
Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter
PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
81c2r65A_
not modelled 99.4 15
PDB header:hydrolase
Chain: A: PDB Molecule:cell division protease ftsh homolog;
PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex
82c6matE_
not modelled 99.4 13
PDB header:ribosomal protein
Chain: E: PDB Molecule:rix7 mutant;
PDBTitle: cryo-em structure of the essential ribosome assembly aaa-atpase rix7
83c3d8bB_
not modelled 99.4 17
PDB header:hydrolase
Chain: B: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
84c5udbA_
not modelled 99.4 16
PDB header:replication
Chain: A: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
85c2c99A_
not modelled 99.4 11
PDB header:transcription regulation
Chain: A: PDB Molecule:psp operon transcriptional activator;
PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
86c4lcbA_
not modelled 99.4 12
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein cdvc, vps4;
PDBTitle: structure of vps4 homolog from acidianus hospitalis
87d1g8pa_
not modelled 99.4 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
88c4xgcD_
not modelled 99.4 13
PDB header:dna binding protein
Chain: D: PDB Molecule:origin recognition complex subunit 4;
PDBTitle: crystal structure of the eukaryotic origin recognition complex
89c1ny5A_
not modelled 99.4 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
90c5vq9D_
not modelled 99.4 16
PDB header:protein binding
Chain: D: PDB Molecule:pachytene checkpoint protein 2 homolog;
PDBTitle: structure of human trip13, apo form
91c1sxjC_
not modelled 99.4 16
PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
92c3k1jA_
not modelled 99.4 15
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent protease lon;
PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1
93c2fnaA_
not modelled 99.4 15
PDB header:atp-binding protein
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus2 solfataricus p2 at 2.00 a resolution
94c1iqpF_
not modelled 99.4 21
PDB header:replication
Chain: F: PDB Molecule:rfcs;
PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus
95c5ifwB_
not modelled 99.4 14
PDB header:signaling protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: quantitative interaction mapping reveals an extended ubiquitin2 regulatory domain in aspl that disrupts functional p97 hexamers and3 induces cell death
96c1ojlD_
not modelled 99.4 13
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
97c4xgcA_
not modelled 99.4 20
PDB header:dna binding protein
Chain: A: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: crystal structure of the eukaryotic origin recognition complex
98d1l8qa2
not modelled 99.4 10
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
99d1sxje2
not modelled 99.4 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
100c3eihB_
not modelled 99.4 15
PDB header:protein transport
Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4;
PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
101c5udbD_
not modelled 99.4 12
PDB header:replication
Chain: D: PDB Molecule:origin recognition complex subunit 4;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
102c3u5zM_
not modelled 99.3 11
PDB header:dna binding protein/dna
Chain: M: PDB Molecule:dna polymerase accessory protein 44;
PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
103c5w0tA_
not modelled 99.3 13
PDB header:hydrolase
Chain: A: PDB Molecule:protein msp1;
PDBTitle: crystal structure of monomeric msp1 from s. cerevisiae
104c2chvE_
not modelled 99.3 19
PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
105c6b5cA_
not modelled 99.3 19
PDB header:cell cycle
Chain: A: PDB Molecule:katanin p60 atpase-containing subunit a-like 1;
PDBTitle: structural basis for katanin self-assembly
106c5kzfJ_
not modelled 99.3 14
PDB header:hydrolase
Chain: J: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of near full-length hexameric mycobacterium2 tuberculosis proteasomal atpase mpa in apo form
107c5ujmE_
not modelled 99.3 12
PDB header:replication
Chain: E: PDB Molecule:origin recognition complex subunit 5;
PDBTitle: structure of the active form of human origin recognition complex and2 its atpase motor module
108c5ep0A_
not modelled 99.3 15
PDB header:transcription
Chain: A: PDB Molecule:putative repressor protein luxo;
PDBTitle: quorum-sensing signal integrator luxo - receiver+catalytic domains
109c5uj7B_
not modelled 99.3 20
PDB header:dna binding protein
Chain: B: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: structure of the active form of human origin recognition complex2 atpase motor module, complex subunits 1, 4, 5
110c1sxjE_
not modelled 99.3 18
PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
111c1jr3E_
not modelled 99.3 20
PDB header:transferase
Chain: E: PDB Molecule:dna polymerase iii, delta' subunit;
PDBTitle: crystal structure of the processivity clamp loader gamma complex of e.2 coli dna polymerase iii
112c2r44A_
not modelled 99.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative atpase (chu_0153) from cytophaga2 hutchinsonii atcc 33406 at 2.00 a resolution
113c1sxjD_
not modelled 99.3 15
PDB header:replication
Chain: D: PDB Molecule:activator 1 41 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
114c3j96F_
not modelled 99.3 15
PDB header:hydrolase
Chain: F: PDB Molecule:vesicle-fusing atpase;
PDBTitle: structure of 20s supercomplex determined by single particle2 cryoelectron microscopy (state i)
115c2qz4A_
not modelled 99.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:paraplegin;
PDBTitle: human paraplegin, aaa domain in complex with adp
116c1sxjB_
not modelled 99.3 19
PDB header:replication
Chain: B: PDB Molecule:activator 1 37 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
117c3sylB_
not modelled 99.3 17
PDB header:chaperone
Chain: B: PDB Molecule:protein cbbx;
PDBTitle: crystal structure of the aaa+ protein cbbx, native structure
118c5wc0D_
not modelled 99.3 15
PDB header:motor protein
Chain: D: PDB Molecule:meiotic spindle formation protein mei-1;
PDBTitle: katanin hexamer in spiral conformation
119d1e32a2
not modelled 99.3 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
120c5d4wB_
not modelled 99.3 15
PDB header:chaperone
Chain: B: PDB Molecule:putative heat shock protein;
PDBTitle: crystal structure of hsp104

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite