Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2823c_(-)_3129354_3131783
DateWed Aug 7 12:50:48 BST 2019
Unique Job ID1462f3a9366f507f
SequenceMNPQLIEAII ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:89.322 Y:69.409 Z:96.156
Model (left) based on template c6ifnA_
Top template information
PDB header:rna binding protein
Chain: A: PDB Molecule:type iii-a crispr-associated protein csm1;
PDBTitle: crystal structure of type iii-a crispr csm complex
Confidence and coverage
Confidence:100.0% Coverage: 89%
723 residues ( 89% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
807 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ifnA_
100.0 44
PDB header:rna binding protein
Chain: A: PDB Molecule:type iii-a crispr-associated protein csm1;
PDBTitle: crystal structure of type iii-a crispr csm complex
2c6iqwA_
100.0 27
PDB header:rna binding protein/rna
Chain: A: PDB Molecule:csm1;
PDBTitle: cryo-em structure of csm effector complex
3c4uw2A_
100.0 29
PDB header:immune system
Chain: A: PDB Molecule:csm1;
PDBTitle: crystal structure of csm1 in t.onnurineus
4c4w8yA_
100.0 19
PDB header:rna binding protein
Chain: A: PDB Molecule:crispr system cmr subunit cmr2;
PDBTitle: structure of full length cmr2 from pyrococcus furiosus (manganese2 bound form)
5c3ungC_
100.0 20
PDB header:unknown function
Chain: C: PDB Molecule:cmr2dhd;
PDBTitle: structure of the cmr2 subunit of the crispr rna silencing complex
6c4uw2C_
100.0 30
PDB header:immune system
Chain: C: PDB Molecule:csm1;
PDBTitle: crystal structure of csm1 in t.onnurineus
7c3breA_
98.5 19
PDB header:signaling protein
Chain: A: PDB Molecule:probable two-component response regulator;
PDBTitle: crystal structure of p.aeruginosa pa3702
8c1w25B_
98.4 20
PDB header:signaling protein
Chain: B: PDB Molecule:stalked-cell differentiation controlling protein;
PDBTitle: response regulator pled in complex with c-digmp
9c5llxB_
98.4 16
PDB header:transferase
Chain: B: PDB Molecule:diguanylate cyclase (ggdef) domain-containing protein;
PDBTitle: bacteriophytochrome activated diguanylyl cyclase from idiomarina2 species a28l with gtp bound
10c2o08B_
98.4 17
PDB header:hydrolase
Chain: B: PDB Molecule:bh1327 protein;
PDBTitle: crystal structure of a putative hd superfamily hydrolase (bh1327) from2 bacillus halodurans at 1.90 a resolution
11c3i5aA_
98.4 22
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator/ggdef domain protein;
PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae
12c3ccgA_
98.3 26
PDB header:hydrolase
Chain: A: PDB Molecule:hd superfamily hydrolase;
PDBTitle: crystal structure of predicted hd superfamily hydrolase involved in2 nad metabolism (np_347894.1) from clostridium acetobutylicum at 1.503 a resolution
13c2ogiA_
98.3 20
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein sag1661;
PDBTitle: crystal structure of a putative metal dependent phosphohydrolase2 (sag1661) from streptococcus agalactiae serogroup v at 1.85 a3 resolution
14c4h54B_
98.2 17
PDB header:transferase
Chain: B: PDB Molecule:diguanylate cyclase ydeh;
PDBTitle: crystal structure of the diguanylate cyclase dgcz
15c4zvhB_
98.2 18
PDB header:signaling protein
Chain: B: PDB Molecule:diguanylate cyclase dosc;
PDBTitle: crystal structure of ggdef domain of the e. coli dosc - form iv
16c6eibC_
98.2 17
PDB header:transferase
Chain: C: PDB Molecule:sensory box/ggdef family protein;
PDBTitle: structure of the active ggeef domain of a diguanylate cyclase from2 vibrio cholerae.
17c4zmuD_
98.1 19
PDB header:lyase
Chain: D: PDB Molecule:diguanylate cyclase;
PDBTitle: dcsbis, a diguanylate cyclase from pseudomonas aeruginosa
18c6d9mA_
98.1 17
PDB header:hydrolase
Chain: A: PDB Molecule:fusion protein of endolysin,response receiver sensor
PDBTitle: t4-lysozyme fusion to geobacter ggdef
19c3ezuA_
98.1 24
PDB header:signaling protein
Chain: A: PDB Molecule:ggdef domain protein;
PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution
20c4iobA_
98.1 14
PDB header:lyase
Chain: A: PDB Molecule:diguanylate cyclase tpbb;
PDBTitle: crystal structure of the ggdef domain of pa1120 (yfin or tpbb) from2 pseudomonas aeruginosa at 2.7 ang.
21c4s1cA_
not modelled 98.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:lmo1466 protein;
PDBTitle: crystal structure of l. monocytogenes phosphodiesterase pgph hd domain
22c4mcwA_
not modelled 98.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:metal dependent phosphohydrolase;
PDBTitle: metallo-enzyme from p. marina
23c3ignA_
not modelled 98.0 16
PDB header:transferase
Chain: A: PDB Molecule:diguanylate cyclase;
PDBTitle: crystal structure of the ggdef domain from marinobacter aquaeolei2 diguanylate cyclase complexed with c-di-gmp - northeast structural3 genomics consortium target mqr89a
24c3i5bA_
not modelled 97.9 18
PDB header:signaling protein
Chain: A: PDB Molecule:wspr response regulator;
PDBTitle: crystal structure of the isolated ggdef domain of wpsr from2 pseudomonas aeruginosa
25c3iclA_
not modelled 97.9 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:eal/ggdef domain protein;
PDBTitle: x-ray structure of protein (eal/ggdef domain protein) from2 m.capsulatus, northeast structural genomics consortium target mcr174c
26c3tvkA_
not modelled 97.8 18
PDB header:transferase
Chain: A: PDB Molecule:diguanylate cyclase dgcz;
PDBTitle: diguanylate cyclase domain of dgcz
27c3i5cA_
not modelled 97.8 19
PDB header:signaling protein
Chain: A: PDB Molecule:fusion of general control protein gcn4 and wspr response
PDBTitle: crystal structure of a fusion protein containing the leucine zipper of2 gcn4 and the ggdef domain of wspr from pseudomonas aeruginosa
28d2pq7a1
not modelled 97.8 29
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
29c5ihyB_
not modelled 97.8 12
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of bacillus subtilis semet-ypgq
30c3mtkA_
not modelled 97.8 13
PDB header:transferase
Chain: A: PDB Molecule:diguanylate cyclase/phosphodiesterase;
PDBTitle: x-ray structure of diguanylate cyclase/phosphodiesterase from2 caldicellulosiruptor saccharolyticus, northeast structural genomics3 consortium target clr27c
31c4wxoA_
not modelled 97.8 13
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: sadc (300-487) from pseudomonas aeruginosa pao1
32c5z7cA_
not modelled 97.8 21
PDB header:metal binding protein
Chain: A: PDB Molecule:3'3'-cgamp-specific phosphodiesterase 3;
PDBTitle: crystal structure of cyclic gmp-amp specifc phosphodiesterases in2 v.cholerae (v-cgap3)
33c4r8zB_
not modelled 97.7 19
PDB header:hydrolase
Chain: B: PDB Molecule:cyclic di-gmp phosphodiesterase;
PDBTitle: crystal structure of pa4781 hd-gyp domain from pseudomonas aeruginosa2 at 2.2a resolution showing a bi-metallic ni ion center
34c4n71A_
not modelled 97.7 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:predicted hd phosphohydrolase phnz;
PDBTitle: x-ray crystal structure of 2-amino-1-hydroxyethylphosphonate-bound2 phnz
35c4zmmB_
not modelled 97.6 18
PDB header:transferase
Chain: B: PDB Molecule:diguanylate cyclase;
PDBTitle: ggdef domain of dcsbis complexed with c-di-gmp
36c3qyyB_
not modelled 97.6 19
PDB header:signaling protein/inhibitor
Chain: B: PDB Molecule:response regulator;
PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp
37c4ymeA_
not modelled 97.6 17
PDB header:lyase
Chain: A: PDB Molecule:sensory box/ggdef family protein;
PDBTitle: crystal structure of a sensory box/ggdef family protein (cc_0091) from2 caulobacter crescentus cb15 at 1.40 a resolution (psi community3 target, shapiro)
38c3m1tA_
not modelled 97.6 25
PDB header:hydrolase
Chain: A: PDB Molecule:putative phosphohydrolase;
PDBTitle: crystal structure of putative phosphohydrolase (yp_929327.1) from2 shewanella amazonensis sb2b at 1.62 a resolution
39d1w25a3
not modelled 97.5 14
Fold:Ferredoxin-like
Superfamily:Nucleotide cyclase
Family:GGDEF domain
40c5euhA_
not modelled 97.5 18
PDB header:membrane protein
Chain: A: PDB Molecule:putative ggdef domain membrane protein;
PDBTitle: crystal structure of the c-di-gmp-bound ggdef domain of p. fluorescens2 gcbc
41c3wfrH_
not modelled 97.5 22
PDB header:transferase/rna
Chain: H: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 2
42c3hvaA_
not modelled 97.5 10
PDB header:transferase
Chain: A: PDB Molecule:protein fimx;
PDBTitle: crystal structure of fimx ggdef domain from pseudomonas aeruginosa
43c3wfrG_
not modelled 97.5 23
PDB header:transferase/rna
Chain: G: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 2
44c4urgB_
not modelled 97.4 14
PDB header:lyase
Chain: B: PDB Molecule:diguanylate cyclase;
PDBTitle: crystal structure of ggdef domain from t.maritima (active-like dimer)
45c3wfpA_
not modelled 97.4 22
PDB header:transferase
Chain: A: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme (apo form 2)
46c3wfpB_
not modelled 97.4 22
PDB header:transferase
Chain: B: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme (apo form 2)
47c6npaD_
not modelled 97.4 37
PDB header:oxidoreductase
Chain: D: PDB Molecule:tmpb, (r)-1-hydroxy-2-trimethylaminoethylphosphonate
PDBTitle: x-ray crystal structure of tmpb, (r)-1-hydroxy-2-2 trimethylaminoethylphosphonate oxygenase, with (r)-1-hydroxy-2-3 trimethylaminoethylphosphonate
48c3hc1A_
not modelled 97.3 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized hdod domain protein;
PDBTitle: crystal structure of hdod domain protein with unknown function2 (np_953345.1) from geobacter sulfurreducens at 1.90 a resolution
49c3wfrF_
not modelled 97.1 21
PDB header:transferase/rna
Chain: F: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 2
50c3gw7A_
not modelled 97.1 23
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein yedj;
PDBTitle: crystal structure of a metal-dependent phosphohydrolase with conserved2 hd domain (yedj) from escherichia coli in complex with nickel ions.3 northeast structural genomics consortium target er63
51d2qgsa1
not modelled 97.1 14
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
52c3memA_
not modelled 97.0 16
PDB header:signaling protein
Chain: A: PDB Molecule:putative signal transduction protein;
PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution
53c3wfsD_
not modelled 97.0 20
PDB header:transferase/rna
Chain: D: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 3
54c2qv6D_
not modelled 97.0 16
PDB header:hydrolase
Chain: D: PDB Molecule:gtp cyclohydrolase iii;
PDBTitle: gtp cyclohydrolase iii from m. jannaschii (mj0145)2 complexed with gtp and metal ions
55c3wfrE_
not modelled 96.9 20
PDB header:transferase/rna
Chain: E: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 2
56c3wfqH_
not modelled 96.9 20
PDB header:transferase/rna
Chain: H: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 1
57c3wfqG_
not modelled 96.9 20
PDB header:transferase/rna
Chain: G: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 1
58d1vqra_
not modelled 96.9 13
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:modified HD domain
59c3wfsC_
not modelled 96.8 22
PDB header:transferase/rna
Chain: C: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 3
60c3wfqE_
not modelled 96.8 20
PDB header:transferase/rna
Chain: E: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme complex 1
61c5b7iA_
not modelled 96.4 24
PDB header:hydrolase/unknown function
Chain: A: PDB Molecule:crispr-associated nuclease/helicase cas3 subtype i-f/ypest;
PDBTitle: cas3-acrf3 complex
62c3i7aA_
not modelled 96.3 7
PDB header:hydrolase
Chain: A: PDB Molecule:putative metal-dependent phosphohydrolase;
PDBTitle: crystal structure of putative metal-dependent phosphohydrolase2 (yp_926882.1) from shewanella amazonensis sb2b at 2.06 a resolution
63c3ljvA_
not modelled 96.3 14
PDB header:transcription
Chain: A: PDB Molecule:mmoq response regulator;
PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m
64c3wfoB_
not modelled 96.2 25
PDB header:transferase
Chain: B: PDB Molecule:poly a polymerase;
PDBTitle: trna processing enzyme (apo form 1)
65d3djba1
not modelled 96.1 19
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
66d2pjqa1
not modelled 96.0 16
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
67c3hvwA_
not modelled 95.9 15
PDB header:lyase
Chain: A: PDB Molecule:diguanylate-cyclase (dgc);
PDBTitle: crystal structure of the ggdef domain of the pa2567 protein from2 pseudomonas aeruginosa, northeast structural genomics consortium3 target par365c
68c3m5fA_
not modelled 95.9 22
PDB header:hydrolase
Chain: A: PDB Molecule:metal dependent phosphohydrolase;
PDBTitle: structure of mj0384, a cas3 protein from methanocaldococcus jannaschii
69c3pjwA_
not modelled 95.7 18
PDB header:lyase
Chain: A: PDB Molecule:cyclic dimeric gmp binding protein;
PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23
70c2floA_
not modelled 95.6 10
PDB header:hydrolase
Chain: A: PDB Molecule:exopolyphosphatase;
PDBTitle: crystal structure of exopolyphosphatase (ppx) from e. coli o157:h7
71d1u6za1
not modelled 95.6 10
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:Ppx associated domain
72d3b57a1
not modelled 95.2 16
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
73c5xgdA_
not modelled 95.1 19
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized protein pa0861;
PDBTitle: crystal structure of the pas-ggdef-eal domain of pa0861 from2 pseudomonas aeruginosa in complex with gtp
74d3dtoa1
not modelled 94.9 14
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
75c4q2dA_
not modelled 93.8 33
PDB header:hydrolase
Chain: A: PDB Molecule:crispr-associated helicase cas3;
PDBTitle: crystal structure of crispr-associated protein in complex with 2'-2 deoxyadenosine 5'-triphosphate
76c4qqxA_
not modelled 93.3 19
PDB header:hydrolase/dna
Chain: A: PDB Molecule:crispr-associated helicase, cas3 family;
PDBTitle: crystal structure of t. fusca cas3-atp
77c5m3cB_
not modelled 92.6 18
PDB header:hydrolase
Chain: B: PDB Molecule:diguanylate cyclase;
PDBTitle: structure of the hybrid domain (ggdef-eal) of pa0575 from pseudomonas2 aeruginosa pao1 at 2.8 ang. with gtp and ca2+ bound to the active3 site of the ggdef domain
78c3skdA_
not modelled 92.1 21
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein tthb187;
PDBTitle: crystal structure of the thermus thermophilus cas3 hd domain in the2 presence of ni2+
79d2heka1
not modelled 91.1 15
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
80c6brhA_
not modelled 90.8 29
PDB header:hydrolase
Chain: A: PDB Molecule:deoxynucleoside triphosphate triphosphohydrolase samhd1;
PDBTitle: the sam domain of mouse samhd1 is critical for its activation and2 regulation
81c3u1nC_
not modelled 90.2 29
PDB header:hydrolase
Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1;
PDBTitle: structure of the catalytic core of human samhd1
82c4bzbB_
not modelled 90.0 18
PDB header:hydrolase
Chain: B: PDB Molecule:deoxynucleoside triphosphate triphosphohydrolase samhd1;
PDBTitle: crystal structure of the tetrameric dgtp-bound samhd12 mutant catalytic core
83c2pgsA_
not modelled 89.9 22
PDB header:hydrolase
Chain: A: PDB Molecule:putative deoxyguanosinetriphosphate triphosphohydrolase;
PDBTitle: crystal structure of a putative deoxyguanosinetriphosphate2 triphosphohydrolase from pseudomonas syringae pv. phaseolicola 1448a
84c3hi0B_
not modelled 89.7 24
PDB header:hydrolase
Chain: B: PDB Molecule:putative exopolyphosphatase;
PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution
85c2o6iA_
not modelled 88.6 29
PDB header:hydrolase
Chain: A: PDB Molecule:hd domain protein;
PDBTitle: structure of an enterococcus faecalis hd domain phosphohydrolase
86d2o6ia1
not modelled 88.6 29
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
87c5ao4D_
not modelled 88.1 31
PDB header:hydrolase
Chain: D: PDB Molecule:deoxynucleoside triphosphate triphosphohydrolase samhd1;
PDBTitle: crystal structure of in vitro phosphorylated human samhd1 (amino acid2 residues 115-626) bound to gtp
88c2q14A_
not modelled 87.7 33
PDB header:hydrolase
Chain: A: PDB Molecule:phosphohydrolase;
PDBTitle: crystal structure of phosphohydrolase (bt4208) from bacteroides2 thetaiotaomicron vpi-5482 at 2.20 a resolution
89d2fiqa1
not modelled 85.8 20
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:GatZ-like
90c6dk9I_
not modelled 85.4 18
PDB header:lyase
Chain: I: PDB Molecule:dna damage-inducible protein;
PDBTitle: yeast ddi2 cyanamide hydratase
91c2dqbB_
not modelled 84.7 44
PDB header:hydrolase, dna binding protein
Chain: B: PDB Molecule:deoxyguanosinetriphosphate triphosphohydrolase, putative;
PDBTitle: crystal structure of dntp triphosphohydrolase from thermus2 thermophilus hb8, which is homologous to dgtp triphosphohydrolase
92c3kq5A_
not modelled 84.7 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical cytosolic protein;
PDBTitle: crystal structure of an uncharacterized protein from coxiella burnetii
93d3bxda1
not modelled 74.4 43
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:MioX-like
94c2huoA_
not modelled 74.4 43
PDB header:oxidoreductase
Chain: A: PDB Molecule:inositol oxygenase;
PDBTitle: crystal structure of mouse myo-inositol oxygenase in complex with2 substrate
95c4rnhA_
not modelled 72.3 21
PDB header:transferase, hydrolase
Chain: A: PDB Molecule:motility regulator;
PDBTitle: pamora tandem diguanylate cyclase - phosphodiesterase, c-di-gmp2 complex
96d2ibna1
not modelled 71.4 43
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:MioX-like
97c3j20P_
not modelled 67.7 24
PDB header:ribosome
Chain: P: PDB Molecule:30s ribosomal protein s14p type z;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
98c3bg2A_
not modelled 64.3 45
PDB header:hydrolase
Chain: A: PDB Molecule:dgtp triphosphohydrolase;
PDBTitle: crystal structure of deoxyguanosinetriphosphate triphosphohydrolase2 from flavobacterium sp. med217
99c3jyvN_
not modelled 62.5 33
PDB header:ribosome
Chain: N: PDB Molecule:40s ribosomal protein s29(a);
PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution
100c2xznN_
not modelled 62.2 24
PDB header:ribosome
Chain: N: PDB Molecule:rps29e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
101c2cqzA_
not modelled 61.0 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:177aa long hypothetical protein;
PDBTitle: crystal structure of ph0347 protein from pyrococcus horikoshii ot3
102d1hk8a_
not modelled 57.7 33
Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:Class III anaerobic ribonucleotide reductase NRDD subunit
103c1hk8A_
not modelled 57.7 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase;
PDBTitle: structural basis for allosteric substrate specificity regulation in2 class iii ribonucleotide reductases: nrdd in complex with dgtp
104c2hr5B_
not modelled 54.4 17
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
105c3zey8_
not modelled 53.7 24
PDB header:ribosome
Chain: 8: PDB Molecule:ribosomal protein s29, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
106c2zkqn_
not modelled 53.5 22
PDB header:ribosomal protein/rna
Chain: N: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
107c5xxud_
not modelled 51.8 27
PDB header:ribosome
Chain: D: PDB Molecule:ribosomal protein us3;
PDBTitle: small subunit of toxoplasma gondii ribosome
108c1dvbA_
not modelled 50.7 13
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
109c1z1lA_
not modelled 50.7 27
PDB header:hydrolase
Chain: A: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase;
PDBTitle: the crystal structure of the phosphodiesterase 2a catalytic2 domain
110c5xyid_
not modelled 49.9 18
PDB header:ribosome
Chain: D: PDB Molecule:ribosomal protein s3, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
111d3dy8a1
not modelled 49.2 13
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:PDEase
112c1xotB_
not modelled 49.0 27
PDB header:hydrolase
Chain: B: PDB Molecule:camp-specific 3',5'-cyclic phosphodiesterase 4b;
PDBTitle: catalytic domain of human phosphodiesterase 4b in complex with2 vardenafil
113c3qi4A_
not modelled 48.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:high affinity cgmp-specific 3',5'-cyclic phosphodiesterase
PDBTitle: crystal structure of pde9a(q453e) in complex with ibmx
114d1taza_
not modelled 48.9 27
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:PDEase
115c2ounA_
not modelled 48.8 33
PDB header:hydrolase
Chain: A: PDB Molecule:camp and camp-inhibited cgmp 3',5'-cyclic
PDBTitle: crystal structure of pde10a2 in complex with amp
116d1so2a_
not modelled 48.1 20
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:PDEase
117d1y2ka1
not modelled 48.1 27
Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:PDEase
118c6az1S_
not modelled 48.0 23
PDB header:ribosome/antibiotic
Chain: S: PDB Molecule:ribosomal protein s14;
PDBTitle: cryo-em structure of the small subunit of leishmania ribosome bound to2 paromomycin
119c2r8qA_
not modelled 47.9 20
PDB header:hydrolase
Chain: A: PDB Molecule:class i phosphodiesterase pdeb1;
PDBTitle: structure of lmjpdeb1 in complex with ibmx
120c1xozA_
not modelled 47.5 27
PDB header:hydrolase
Chain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase;
PDBTitle: catalytic domain of human phosphodiesterase 5a in complex2 with tadalafil

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