Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2827c_(-)_3134606_3135493
DateWed Aug 7 12:50:49 BST 2019
Unique Job IDfd83c4c55053cd4f
SequenceVVSPAGADRR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.451 Y:73.437 Z:57.428
Model (left) based on template c1zelA_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rv2827c;
PDBTitle: crystal structure of rv2827c protein from mycobacterium tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 99%
291 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1zelA_



100.0 100
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rv2827c;
PDBTitle: crystal structure of rv2827c protein from mycobacterium tuberculosis
2d1zela2



100.0 100
Fold:Rv2827c C-terminal domain-like
Superfamily:Rv2827c C-terminal domain-like
Family:Rv2827c C-terminal domain-like
3d1zela1



100.0 100
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Rv2827c N-terminal domain-like
4d1d8ca_



33.6 29
Fold:TIM beta/alpha-barrel
Superfamily:Malate synthase G
Family:Malate synthase G
5c5es2A_



33.1 29
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein lpg0634;
PDBTitle: the crystal structure of a functionally uncharacterized protein2 lpg0634 from legionella pneumophila subsp. pneumophila str.3 philadelphia 1
6c3rnlA_



21.8 43
PDB header:transferase
Chain: A: PDB Molecule:sulfotransferase;
PDBTitle: crystal structure of sulfotransferase from alicyclobacillus2 acidocaldarius
7c5z5mB_



20.7 20
PDB header:lyase
Chain: B: PDB Molecule:predicted protein;
PDBTitle: crystal structure of (s)-allantoin synthase
8d1aoya_



17.7 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
9c5vmoB_



14.2 78
PDB header:viral protein/apoptosis
Chain: B: PDB Molecule:bcl-2 interacting mediator of cell death;
PDBTitle: crystal structure of grouper iridovirus giv66:bim complex
10c2kztA_



13.7 19
PDB header:apoptosis
Chain: A: PDB Molecule:programmed cell death protein 4;
PDBTitle: structure of the tandem ma-3 region of pdcd4
11d1ug7a_



10.4 43
Fold:Four-helical up-and-down bundle
Superfamily:Domain from hypothetical 2610208m17rik protein
Family:Domain from hypothetical 2610208m17rik protein
12c1atiA_



9.8 23
PDB header:protein biosynthesis
Chain: A: PDB Molecule:glycyl-trna synthetase;
PDBTitle: crystal structure of glycyl-trna synthetase from thermus thermophilus
13c5oold_



9.8 27
PDB header:ribosome
Chain: D: PDB Molecule:39s ribosomal protein l2, mitochondrial;
PDBTitle: structure of a native assembly intermediate of the human mitochondrial2 ribosome with unfolded interfacial rrna
14c1ggmB_



9.3 23
PDB header:ligase
Chain: B: PDB Molecule:glycine--trna ligase;
PDBTitle: glycyl-trna synthetase from thermus thermophilus complexed with2 glycyl-adenylate
15c3qd7X_



8.6 17
PDB header:hydrolase
Chain: X: PDB Molecule:uncharacterized protein ydal;
PDBTitle: crystal structure of ydal, a stand-alone small muts-related protein2 from escherichia coli
16c4rhzA_



8.5 15
PDB header:toxin
Chain: A: PDB Molecule:cry23aa1;
PDBTitle: crystal structure of cry23aa1 and cry37aa1 binary protein complex
17c2bcwC_



8.3 19
PDB header:ribosome
Chain: C: PDB Molecule:elongation factor g;
PDBTitle: coordinates of the n-terminal domain of ribosomal protein l11,c-2 terminal domain of ribosomal protein l7/l12 and a portion of the g'3 domain of elongation factor g, as fitted into cryo-em map of an4 escherichia coli 70s*ef-g*gdp*fusidic acid complex
18c4wqkA_



7.6 6
PDB header:transferase
Chain: A: PDB Molecule:2''-aminoglycoside nucleotidyltransferase;
PDBTitle: crystal structure of aminoglycoside nucleotidylyltransferase ant(2")-2 ia, apo form
19c5zz5D_



7.6 23
PDB header:gene regulation
Chain: D: PDB Molecule:redox-sensing transcriptional repressor rex;
PDBTitle: redox-sensing transcriptional repressor rex
20c1bqfA_



7.0 73
PDB header:hormone/growth factor
Chain: A: PDB Molecule:protein (growth-blocking peptide);
PDBTitle: growth-blocking peptide (gbp) from pseudaletia separata
21d1r7la_



not modelled 6.9 58
Fold:Bacillus phage protein
Superfamily:Bacillus phage protein
Family:Bacillus phage protein
22c4kr3A_



not modelled 6.7 22
PDB header:ligase/rna
Chain: A: PDB Molecule:glycine--trna ligase;
PDBTitle: glycyl-trna synthetase mutant e71g in complex with trna-gly
23c2g57A_



not modelled 6.7 67
PDB header:oncoprotein
Chain: A: PDB Molecule:beta-catenin;
PDBTitle: structure of the phosphorylation motif of the oncogenic2 protein beta-catenin recognized by a selective monoclonal3 antibody
24c2pqkB_



not modelled 6.5 53
PDB header:apoptosis
Chain: B: PDB Molecule:bim bh3 peptide;
PDBTitle: x-ray crystal structure of human mcl-1 in complex with bim bh3
25d1b4aa1



not modelled 6.0 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
26c4wv4A_



not modelled 5.9 36
PDB header:transcription
Chain: A: PDB Molecule:transcription initiation factor tfiid subunit 10;
PDBTitle: heterodimer of taf8/taf10
27c3jcuj_



not modelled 5.8 43
PDB header:membrane protein
Chain: J: PDB Molecule:photosystem ii reaction center protein j;
PDBTitle: cryo-em structure of spinach psii-lhcii supercomplex at 3.2 angstrom2 resolution
28d2p5ka1



not modelled 5.7 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
29d1f9na1



not modelled 5.7 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
30c5unkA_



not modelled 5.6 31
PDB header:dna binding protein
Chain: A: PDB Molecule:sleeping beauty transposase;
PDBTitle: nmr structure of the red subdomain of the sleeping beauty transposase
31d1ohfa_



not modelled 5.5 26
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tetraviridae-like VP
32c4o1hA_



not modelled 5.4 33
PDB header:transcription regulator
Chain: A: PDB Molecule:transcription regulator glnr;
PDBTitle: crystal structure of the regulatory domain of ameglnr
33d1t6sa2



not modelled 5.1 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ScpB/YpuH-like

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