Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2839c_(infB)_3145181_3147883
DateWed Aug 7 12:50:50 BST 2019
Unique Job IDa3d6cb52721bc8f9
SequenceVAAGKARVHE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:121.036 Y:107.775 Z:75.437
Model (left) based on template c3j4jA_
Top template information
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: model of full-length t. thermophilus translation initiation factor 22 refined against its cryo-em density from a 30s initiation complex map
Confidence and coverage
Confidence:100.0% Coverage: 63%
564 residues ( 63% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3j4jA_
100.0 42
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: model of full-length t. thermophilus translation initiation factor 22 refined against its cryo-em density from a 30s initiation complex map
2c1zo1I_
100.0 53
PDB header:translation/rna
Chain: I: PDB Molecule:translation initiation factor 2;
PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex
3c3izyP_
100.0 46
PDB header:rna, ribosomal protein
Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial;
PDBTitle: mammalian mitochondrial translation initiation factor 2
4c4n3nA_
100.0 27
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5b-like protein,
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-1116) from chaetomium thermophilum, apo form
5c3wbkB_
100.0 28
PDB header:biosynthetic protein
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: crystal structure analysis of eukaryotic translation initiation factor2 5b and 1a complex
6c1g7tA_
100.0 29
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if2/eif5b;
PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp
7c5fg3A_
100.0 32
PDB header:translation
Chain: A: PDB Molecule:probable translation initiation factor if-2;
PDBTitle: crystal structure of gdp-bound aif5b from aeropyrum pernix
8c4upyB_
100.0 27
PDB header:ribosome
Chain: B: PDB Molecule:eif5b;
PDBTitle: mammalian 80s hcv-ires initiation complex with eif5b pre-like state
9c4byxV_
100.0 28
PDB header:ribosome
Chain: V: PDB Molecule:eukaryotic translation initiation factor 5b, probable
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic2 translation initiation complex
10c4kjzD_
100.0 40
PDB header:translation
Chain: D: PDB Molecule:translation initiation factor if-2;
PDBTitle: crystal structure of thermus thermophilus if2, apo and gdp-bound forms2 (2-474)
11c4nclB_
100.0 30
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b-like protein;
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-970) from chaetomium thermophilum in complex with gdp
12c4b3xA_
100.0 45
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: bacterial translation initiation factor if2 (1-363), apo form
13c5izmA_
100.0 18
PDB header:translation
Chain: A: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdpnp
14c5izkB_
100.0 19
PDB header:translation
Chain: B: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdp
15c1wb1C_
100.0 21
PDB header:protein synthesis
Chain: C: PDB Molecule:translation elongation factor selb;
PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp
16c4qjty_
100.0 25
PDB header:ribosome
Chain: Y: PDB Molecule:
PDBTitle: crystal structure of elongation factor 4 (ef4/lepa) bound to the2 thermus thermophilus 70s ribosome, 30s subunit of the 70s ribosome
17c4byrP_
100.0 32
PDB header:ribosome
Chain: P: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet2 eukaryotic translation initiation complex
18c3izq1_
100.0 22
PDB header:ribosomal protein,hydrolase
Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome
19c3agqA_
100.0 25
PDB header:translation,transferase
Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q
PDBTitle: structure of viral polymerase form ii
20c4n3gA_
100.0 20
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5b-like protein,
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (870-1116) from chaetomium thermophilum, domains iii and iv
21c2ywfA_
not modelled 100.0 28
PDB header:translation
Chain: A: PDB Molecule:gtp-binding protein lepa;
PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
22c3mmpC_
not modelled 100.0 27
PDB header:transferase
Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts;
PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins
23c4zu9A_
not modelled 100.0 25
PDB header:translation
Chain: A: PDB Molecule:elongation factor selb;
PDBTitle: crystal structure of bacterial selenocysteine-specific elongation2 factor ef-sec
24c4zciA_
not modelled 100.0 27
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtp-binding protein typa/bipa;
PDBTitle: crystal structure of escherichia coli gtpase bipa/typa
25c3degC_
not modelled 100.0 27
PDB header:ribosome
Chain: C: PDB Molecule:gtp-binding protein lepa;
PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp
26c2xexA_
not modelled 100.0 28
PDB header:translation
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g
27c1d2eA_
not modelled 100.0 29
PDB header:rna binding protein
Chain: A: PDB Molecule:elongation factor tu (ef-tu);
PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp
28c2dy1A_
not modelled 100.0 31
PDB header:signaling protein, translation
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of ef-g-2 from thermus thermophilus
29c2bm0A_
not modelled 100.0 30
PDB header:elongation factor
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: ribosomal elongation factor g (ef-g) fusidic acid resistant mutant2 t84a
30c3tr5C_
not modelled 100.0 25
PDB header:translation
Chain: C: PDB Molecule:peptide chain release factor 3;
PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii
31c1zn0B_
not modelled 100.0 32
PDB header:translation/biosynthetic protein/rna
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: coordinates of rrf and ef-g fitted into cryo-em map of the2 50s subunit bound with both ef-g (gdpnp) and rrf
32c3cb4D_
not modelled 100.0 26
PDB header:translation
Chain: D: PDB Molecule:gtp-binding protein lepa;
PDBTitle: the crystal structure of lepa
33c4fn5A_
not modelled 100.0 31
PDB header:translation/antibiotic
Chain: A: PDB Molecule:elongation factor g 1;
PDBTitle: elongation factor g 1 (pseudomonas aeruginosa) in complex with argyrin2 b
34c1g7cA_
not modelled 100.0 27
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: yeast eef1a:eef1ba in complex with gdpnp
35c5k0yS_
not modelled 100.0 24
PDB header:translation
Chain: S: PDB Molecule:eukaryotic initiation factor 2 gamma subunit (eif2-gamma);
PDBTitle: m48s late-stage initiation complex, purified from rabbit reticulocytes2 lysates, displaying eif2 ternary complex and eif3 i and g subunits3 relocated to the intersubunit face
36c1zunB_
not modelled 100.0 24
PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylate transferase, subunit
PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae
37c3j25A_
not modelled 100.0 29
PDB header:translation
Chain: A: PDB Molecule:tetracycline resistance protein tetm;
PDBTitle: structural basis for tetm-mediated tetracycline resistance
38c1mj1A_
not modelled 100.0 28
PDB header:ribosome
Chain: A: PDB Molecule:elongation factor tu;
PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome
39c3vr1B_
not modelled 100.0 26
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor 3;
PDBTitle: crystal structure analysis of the translation factor rf3
40c3agjC_
not modelled 100.0 28
PDB header:translation/hydrolase
Chain: C: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of archaeal pelota and gtp-bound ef1 alpha complex
41c3wyaA_
not modelled 100.0 29
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of gdp-bound ef1alpha from pyrococcus horikoshii
42c3j38z_
not modelled 100.0 25
PDB header:ribosome
Chain: Z: PDB Molecule:40s ribosomal protein s25;
PDBTitle: structure of the d. melanogaster 40s ribosomal proteins
43c2h5eB_
not modelled 100.0 26
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor rf-3;
PDBTitle: crystal structure of e.coli polypeptide release factor rf3
44c3mcaA_
not modelled 100.0 24
PDB header:translation regulation/hydrolase
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay
45c3b8hA_
not modelled 100.0 27
PDB header:biosynthetic protein/transferase
Chain: A: PDB Molecule:elongation factor 2;
PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex
46c2bvnB_
not modelled 100.0 29
PDB header:elongation factor
Chain: B: PDB Molecule:elongation factor tu;
PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic enacyloxin iia
47c1kk3A_
not modelled 100.0 30
PDB header:translation
Chain: A: PDB Molecule:eif2gamma;
PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+
48c4zkeA_
not modelled 100.0 21
PDB header:gtp binding protein
Chain: A: PDB Molecule:superkiller protein 7;
PDBTitle: crystal structure of the s. cerevisiae ski7 gtpase-like domain, bound2 to gtp.
49c2elfA_
not modelled 100.0 16
PDB header:translation
Chain: A: PDB Molecule:protein translation elongation factor 1a;
PDBTitle: crystal structure of the selb-like elongation factor ef-pyl from2 methanosarcina mazei
50c3p27A_
not modelled 100.0 21
PDB header:signaling protein
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: crystal structure of s. cerevisiae hbs1 protein (gdp-bound form), a2 translational gtpase involved in rna quality control pathways and3 interacting with dom34/pelota
51c2rdo7_
not modelled 100.0 32
PDB header:ribosome
Chain: 7: PDB Molecule:elongation factor g;
PDBTitle: 50s subunit with ef-g(gdpnp) and rrf bound
52c3jcrB_
not modelled 100.0 26
PDB header:splicing
Chain: B: PDB Molecule:hsnu114;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
53c1skqB_
not modelled 100.0 29
PDB header:translation
Chain: B: PDB Molecule:elongation factor 1-alpha;
PDBTitle: the crystal structure of sulfolobus solfataricus elongation factor 1-2 alpha in complex with magnesium and gdp
54c5h7lB_
not modelled 100.0 31
PDB header:translation/ribosomal protein
Chain: B: PDB Molecule:elongation factor 2;
PDBTitle: complex of elongation factor 2-50s ribosomal protein l12
55c2plfA_
not modelled 100.0 28
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: the structure of aif2gamma subunit from the archaeon2 sulfolobus solfataricus in the nucleotide-free form.
56c4crnP_
not modelled 100.0 24
PDB header:translation
Chain: P: PDB Molecule:erf3 in ribosome bound erf1-erf3-gdpnp complex;
PDBTitle: cryo-em of a pretermination complex with erf1 and erf3
57c6notB_
not modelled 100.0 27
PDB header:translation
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of a full length elongation factor g (ef-g) from2 rickettsia prowazekii
58c5z58C_
not modelled 100.0 27
PDB header:splicing
Chain: C: PDB Molecule:116 kda u5 small nuclear ribonucleoprotein component;
PDBTitle: cryo-em structure of a human activated spliceosome (early bact) at 4.92 angstrom.
59c3jb9B_
not modelled 100.0 27
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:pre-mrna-splicing factor cwf10;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
60c3j81k_
not modelled 100.0 19
PDB header:ribosome
Chain: K: PDB Molecule:es10;
PDBTitle: cryoem structure of a partial yeast 48s preinitiation complex
61c1r5nA_
not modelled 100.0 23
PDB header:translation
Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp-
PDBTitle: crystal structure analysis of sup35 complexed with gdp
62c5ganC_
not modelled 100.0 28
PDB header:transcription
Chain: C: PDB Molecule:pre-mrna-splicing factor snu114;
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
63c5lj3C_
not modelled 100.0 27
PDB header:splicing
Chain: C: PDB Molecule:pre-mrna-splicing factor snu114;
PDBTitle: structure of the core of the yeast spliceosome immediately after2 branching
64c5mqfB_
not modelled 100.0 26
PDB header:splicing
Chain: B: PDB Molecule:116 kda u5 small nuclear ribonucleoprotein component;
PDBTitle: cryo-em structure of a human spliceosome activated for step 2 of2 splicing (c* complex)
65c1s0uA_
not modelled 100.0 26
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: eif2gamma apo
66c3j2k7_
not modelled 100.0 23
PDB header:ribosome/translation
Chain: 7: PDB Molecule:eukaryotic polypeptide chain release factor 3;
PDB Fragment:unp residues 147-584; PDBTitle: cryo-em structure of the mammalian erf1-erf3-associated termination2 complex
67c2hdnJ_
not modelled 100.0 28
PDB header:translation
Chain: J: PDB Molecule:elongation factor ef-tu;
PDBTitle: trypsin-modified elongation factor tu in complex with2 tetracycline at 2.8 angstrom resolution
68c5ancK_
not modelled 100.0 37
PDB header:translation
Chain: K: PDB Molecule:elongation factor tu gtp-binding domain-containing protein
PDBTitle: mechanism of eif6 release from the nascent 60s ribosomal subunit
69d1d1na_
not modelled 100.0 57
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
70c2nbgA_
not modelled 100.0 50
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: structure of the geobacillus stearothermophilus if2 g3-subdomain
71c2crvA_
not modelled 100.0 31
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: solution structure of c-terminal domain of mitochondrial2 translational initiationfactor 2
72c1z9bA_
not modelled 100.0 40
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: solution structure of the c1-subdomain of bacillus2 stearothermophilus translation initiation factor if2
73d1g7sa3
not modelled 100.0 21
Fold:Initiation factor IF2/eIF5b, domain 3
Superfamily:Initiation factor IF2/eIF5b, domain 3
Family:Initiation factor IF2/eIF5b, domain 3
74d1f60a3
not modelled 99.9 31
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
75c2e87A_
not modelled 99.9 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph1320;
PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp
76d2bv3a2
not modelled 99.9 33
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
77d1n0ua2
not modelled 99.9 31
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
78d2dy1a2
not modelled 99.9 31
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
79d1zunb3
not modelled 99.9 29
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
80c2lkcA_
not modelled 99.9 66
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: free b.st if2-g2
81c1mkyA_
not modelled 99.9 21
PDB header:ligand binding protein
Chain: A: PDB Molecule:probable gtp-binding protein enga;
PDBTitle: structural analysis of the domain interactions in der, a switch2 protein containing two gtpase domains
82c3j8gX_
not modelled 99.9 20
PDB header:ribosome
Chain: X: PDB Molecule:gtpase der;
PDBTitle: electron cryo-microscopy structure of enga bound with the 50s2 ribosomal subunit
83c5dn8A_
not modelled 99.9 24
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtpase der;
PDBTitle: 1.76 angstrom crystal structure of gtp-binding protein der from2 coxiella burnetii in complex with gdp.
84d1r5ba3
not modelled 99.9 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
85d1yrba1
not modelled 99.9 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
86d1g7sa4
not modelled 99.9 45
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
87c2qthA_
not modelled 99.9 27
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of a gtp-binding protein from the hyperthermophilic2 archaeon sulfolobus solfataricus in complex with gdp
88c2hjgA_
not modelled 99.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein enga;
PDBTitle: the crystal structure of the b. subtilis yphc gtpase in complex with2 gdp
89c3j65o_
not modelled 99.9 13
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l15;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
90c3ievA_
not modelled 99.8 26
PDB header:nucleotide binding protein/rna
Chain: A: PDB Molecule:gtp-binding protein era;
PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna
91c5ady6_
not modelled 99.8 25
PDB header:ribosome
Chain: 6: PDB Molecule:gtpase hflx;
PDBTitle: cryo-em structures of the 50s ribosome subunit bound with hflx
92c5wwnA_
not modelled 99.8 15
PDB header:rna binding protein
Chain: A: PDB Molecule:ribosome biogenesis protein tsr1;
PDBTitle: crystal structure of tsr1
93d1jnya3
not modelled 99.8 31
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
94d1d2ea3
not modelled 99.8 35
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
95d2c78a3
not modelled 99.8 31
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
96c1wf3A_
not modelled 99.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8
97c1egaB_
not modelled 99.8 18
PDB header:hydrolase
Chain: B: PDB Molecule:protein (gtp-binding protein era);
PDBTitle: crystal structure of a widely conserved gtpase era
98c3md0A_
not modelled 99.8 18
PDB header:transport protein
Chain: A: PDB Molecule:arginine/ornithine transport system atpase;
PDBTitle: crystal structure of arginine/ornithine transport system atpase from2 mycobacterium tuberculosis bound to gdp (a ras-like gtpase3 superfamily protein)
99c3gehA_
not modelled 99.8 19
PDB header:hydrolase
Chain: A: PDB Molecule:trna modification gtpase mnme;
PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
100d1wb1a4
not modelled 99.8 27
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
101c3qq5A_
not modelled 99.8 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:small gtp-binding protein;
PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
102d1g7sa1
not modelled 99.8 23
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
103c4dheA_
not modelled 99.8 18
PDB header:cell cycle
Chain: A: PDB Molecule:probable gtp-binding protein engb;
PDBTitle: crystal structure of a probable gtp-binding protein engb from2 burkholderia thailandensis
104c3k53B_
not modelled 99.8 19
PDB header:metal transport
Chain: B: PDB Molecule:ferrous iron transport protein b;
PDBTitle: crystal structure of nfeob from p. furiosus
105d1kk1a3
not modelled 99.8 29
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
106c2wsmB_
not modelled 99.8 19
PDB header:metal binding protein
Chain: B: PDB Molecule:hydrogenase expression/formation protein (hypb);
PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus
107c5jcpB_
not modelled 99.8 25
PDB header:signaling protein,hydrolase
Chain: B: PDB Molecule:arf-gap with rho-gap domain, ank repeat and ph domain-
PDBTitle: rhogap domain of arap3 in complex with rhoa in the transition state
108c3a1vB_
not modelled 99.8 22
PDB header:transport protein
Chain: B: PDB Molecule:iron(ii) transport protein b;
PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form
109c5hcnA_
not modelled 99.8 25
PDB header:hydrolase
Chain: A: PDB Molecule:gpn-loop gtpase 1;
PDBTitle: gpn-loop gtpase npa3 in complex with gmppcp
110c1xzqA_
not modelled 99.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:probable trna modification gtpase trme;
PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
111d1efca3
not modelled 99.7 35
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
112c4csu9_
not modelled 99.7 20
PDB header:ribosome
Chain: 9: PDB Molecule:gtpase obge/cgta;
PDBTitle: cryo-em structures of the 50s ribosome subunit bound with obge
113c2gedB_
not modelled 99.7 22
PDB header:protein transport, signaling protein
Chain: B: PDB Molecule:signal recognition particle receptor beta subunit;
PDBTitle: signal recognition particle receptor beta-subunit in nucleotide-free2 dimerized form
114d2qn6a3
not modelled 99.7 29
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
115d1s0ua3
not modelled 99.7 27
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
116c5c2kA_
not modelled 99.7 23
PDB header:hydrolase activator
Chain: A: PDB Molecule:transforming protein rhoa,rac gtpase-activating protein 1;
PDBTitle: crystal structure of the fusion protein linked by rhoa and the gap2 domain of mgcracgap
117d1svia_
not modelled 99.7 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
118c1lnzA_
not modelled 99.7 20
PDB header:cell cycle
Chain: A: PDB Molecule:spo0b-associated gtp-binding protein;
PDBTitle: structure of the obg gtp-binding protein
119c4wnrA_
not modelled 99.7 22
PDB header:signaling protein
Chain: A: PDB Molecule:leucine-rich-repeat protein;
PDBTitle: structure of methanosarcina barkeri roco2 roccordc bound to gdp
120c5ucvA_
not modelled 99.7 15
PDB header:cell cycle
Chain: A: PDB Molecule:probable gtp-binding protein engb;
PDBTitle: crystal structure of a ribosome biogenesis gtp-binding protein (ysxc)2 from neisseria gonorrhoeae with bound gdp

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite