1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		V	R	T	C	V	G	C	R	K	R	G	L	A	V	E	L	L	R	V	V	A	V	S	T	G	N	G	N	Y	A	V	I	V	D	T	A	T	S	L	P	G	R	G	A	W	L	H	P	L	R	Q	C	A	Q	Q	A	I	R	R	R
Secondary structure
SS confidence
Disorder		?	?		?	?	?	?	?	?																											?	?	?			?																			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Sequence		A	F	A	R	A	L	R	I	A	G	S	P	D	T	S	A	V	V	E	Y	L	E	S	L	G	E	L	E	P	P	G	N	R	T	G	S	N	R	T
Secondary structure
SS confidence
Disorder												?	?	?											?		?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 31%) Alpha helix ( 32%) Beta strand ( 20%)

Rank Aligned region

PDB 1g2r chain A Region: 1 - 93 Aligned: 89 Modelled: 93 Confidence: 100.0% Identity: 21% Fold: YlxR-like Superfamily: YlxR-like Family: YlxR-like Phyre2 PDB 1rut chain X domain 1 Region: 1 - 20 Aligned: 20 Modelled: 20 Confidence: 14.2% Identity: 25% Fold: Glucocorticoid receptor-like (DNA-binding domain) Superfamily: Glucocorticoid receptor-like (DNA-binding domain) Family: LIM domain Phyre2 PDB 2lc0 chain A Region: 60 - 97 Aligned: 38 Modelled: 38 Confidence: 13.1% Identity: 16% PDB header:protein binding Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: rv0020c_nter structure Phyre2 PDB 2hfg chain R Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.5% Identity: 63% PDB header:immune system Chain: R: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of hbr3 bound to cb3s-fab Phyre2 PDB 1kxp chain D domain 3 Region: 46 - 86 Aligned: 41 Modelled: 41 Confidence: 11.2% Identity: 7% Fold: Serum albumin-like Superfamily: Serum albumin-like Family: Serum albumin-like Phyre2 PDB 1osx chain A Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.2% Identity: 63% Fold: TNF receptor-like Superfamily: TNF receptor-like Family: BAFF receptor-like Phyre2 PDB 1osx chain A Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.2% Identity: 63% PDB header:immune system Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily PDBTitle: solution structure of the extracellular domain of blys2 receptor 3 (br3) Phyre2 PDB 1oqe chain R Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.0% Identity: 63% PDB header:immune system Chain: R: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of stall-1 with baff-r Phyre2 PDB 1oqe chain K Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.0% Identity: 63% PDB header:immune system Chain: K: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of stall-1 with baff-r Phyre2 PDB 1oqe chain P Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.0% Identity: 63% PDB header:immune system Chain: P: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of stall-1 with baff-r Phyre2 PDB 1oqe chain K Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.0% Identity: 63% Fold: TNF receptor-like Superfamily: TNF receptor-like Family: BAFF receptor-like Phyre2 PDB 1oqe chain M Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.0% Identity: 63% PDB header:immune system Chain: M: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of stall-1 with baff-r Phyre2 PDB 1oqe chain Q Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.0% Identity: 63% PDB header:immune system Chain: Q: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of stall-1 with baff-r Phyre2 PDB 1oqe chain L Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 11.0% Identity: 63% PDB header:immune system Chain: L: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of stall-1 with baff-r Phyre2 PDB 1p0t chain W Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 10.8% Identity: 63% PDB header:protein binding Chain: W: PDB Molecule: PDBTitle: crystal structure of the baff-baff-r complex (part ii) Phyre2 PDB 1p0t chain 5 Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 10.8% Identity: 63% PDB header:protein binding Chain: 5: PDB Molecule: PDBTitle: crystal structure of the baff-baff-r complex (part ii) Phyre2 PDB 1p0t chain V Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 10.8% Identity: 63% PDB header:protein binding Chain: V: PDB Molecule: PDBTitle: crystal structure of the baff-baff-r complex (part ii) Phyre2 PDB 1p0t chain K Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 10.8% Identity: 63% PDB header:protein binding Chain: K: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of the baff-baff-r complex (part ii) Phyre2 PDB 1p0t chain N Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 10.8% Identity: 63% PDB header:protein binding Chain: N: PDB Molecule:tumor necrosis factor receptor superfamily member 13c; PDBTitle: crystal structure of the baff-baff-r complex (part ii) Phyre2 PDB 1p0t chain 1 Region: 1 - 8 Aligned: 8 Modelled: 8 Confidence: 10.8% Identity: 63% PDB header:protein binding Chain: 1: PDB Molecule: PDB Fragment:residues 1-63; PDBTitle: crystal structure of the baff-baff-r complex (part ii) Phyre2 1 d1g2ra_ 2 d1rutx1 3 c2lc0A_ 4 c2hfgR_ 5 d1kxpd3 6 d1osxa_ 7 c1osxA_ 8 c1oqeR_ 9 c1oqeK_ 10 c1oqeP_ 11 d1oqek_ 12 c1oqeM_ 13 c1oqeQ_ 14 c1oqeL_ 15 c1p0tw_ 16 c1p0t5_ 17 c1p0tv_ 18 c1p0tK_ 19 c1p0tn_ 20 c1p0t1_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99