Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2850c_(-)_3158175_3160064
DateWed Aug 7 12:50:51 BST 2019
Unique Job ID0ea1a13e2403f024
SequenceVKPYPFSAIV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:63.553 Y:51.673 Z:59.061
Model (left) based on template d1g8pa_
Top template information
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
Confidence and coverage
Confidence:100.0% Coverage: 47%
294 residues ( 47% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1g8pa_



100.0 53
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
2c4r7zB_



100.0 23
PDB header:hydrolase
Chain: B: PDB Molecule:cell division control protein 21;
PDBTitle: pfmcm-aaa double-octamer
3c3ja87_



100.0 21
PDB header:hydrolase
Chain: 7: PDB Molecule:minichromosome maintenance 7;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
4c5udb7_



100.0 21
PDB header:replication
Chain: 7: PDB Molecule:dna replication licensing factor mcm7;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
5c3ja84_



100.0 21
PDB header:hydrolase
Chain: 4: PDB Molecule:minichromosome maintenance 4;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
6c5h7i7_



100.0 21
PDB header:hydrolase
Chain: 7: PDB Molecule:dna replication licensing factor mcm7;
PDBTitle: cryo-em structure of the cdt1-mcm2-7 complex in amppnp state
7c3ja85_



100.0 18
PDB header:hydrolase
Chain: 5: PDB Molecule:minichromosome maintenance 5;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
8c3ja82_



100.0 22
PDB header:hydrolase
Chain: 2: PDB Molecule:minichromosome maintenance 2;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
9c3ja83_



100.0 26
PDB header:hydrolase
Chain: 3: PDB Molecule:minichromosome maintenance 3;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
10c5u8s4_



100.0 20
PDB header:replication
Chain: 4: PDB Molecule:dna replication licensing factor mcm4;
PDBTitle: structure of eukaryotic cmg helicase at a replication fork
11c5udb3_



100.0 26
PDB header:replication
Chain: 3: PDB Molecule:dna replication licensing factor mcm3;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
12c3nbxX_



100.0 18
PDB header:hydrolase
Chain: X: PDB Molecule:atpase rava;
PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp
13c6hv93_



100.0 27
PDB header:dna binding protein
Chain: 3: PDB Molecule:dna replication licensing factor mcm3;
PDBTitle: s. cerevisiae cmg-pol epsilon-dna
14c3jc72_



100.0 22
PDB header:hydrolase
Chain: 2: PDB Molecule:dna replication licensing factor mcm2;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
15c3ja86_



100.0 19
PDB header:hydrolase
Chain: 6: PDB Molecule:minichromosome maintenance 6;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
16c5v8f3_



100.0 27
PDB header:replication
Chain: 3: PDB Molecule:dna replication licensing factor mcm3;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
17c3jc57_



100.0 22
PDB header:hydrolase
Chain: 7: PDB Molecule:dna replication licensing factor mcm7;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
18c3jc76_



100.0 18
PDB header:hydrolase
Chain: 6: PDB Molecule:dna replication licensing factor mcm6;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
19c3jc55_



100.0 18
PDB header:hydrolase
Chain: 5: PDB Molecule:minichromosome maintenance protein 5;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
20c5udb5_



100.0 19
PDB header:replication
Chain: 5: PDB Molecule:minichromosome maintenance protein 5;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
21c6hv92_



not modelled 100.0 22
PDB header:dna binding protein
Chain: 2: PDB Molecule:dna replication licensing factor mcm2;
PDBTitle: s. cerevisiae cmg-pol epsilon-dna
22c3jc73_



not modelled 100.0 28
PDB header:hydrolase
Chain: 3: PDB Molecule:dna replication licensing factor mcm3;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
23c3f8tA_



not modelled 100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:predicted atpase involved in replication control, cdc46/mcm
PDBTitle: crystal structure analysis of a full-length mcm homolog from2 methanopyrus kandleri
24c2r44A_



not modelled 100.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative atpase (chu_0153) from cytophaga2 hutchinsonii atcc 33406 at 2.00 a resolution
25c6hv96_



not modelled 99.9 19
PDB header:dna binding protein
Chain: 6: PDB Molecule:dna replication licensing factor mcm6;
PDBTitle: s. cerevisiae cmg-pol epsilon-dna
26c3f9vA_



not modelled 99.9 24
PDB header:hydrolase
Chain: A: PDB Molecule:minichromosome maintenance protein mcm;
PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase
27c6hv97_



not modelled 99.9 21
PDB header:dna binding protein
Chain: 7: PDB Molecule:dna replication licensing factor mcm7;
PDBTitle: s. cerevisiae cmg-pol epsilon-dna
28c3k1jA_



not modelled 99.9 21
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent protease lon;
PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1
29c4fx5A_



not modelled 99.9 16
PDB header:blood clotting
Chain: A: PDB Molecule:von willebrand factor type a;
PDBTitle: von willebrand factor type a from catenulispora acidiphila
30c4ww4A_



not modelled 99.9 23
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
31c5oafB_



not modelled 99.9 26
PDB header:gene regulation
Chain: B: PDB Molecule:ruvb-like 2;
PDBTitle: human rvb1/rvb2 heterohexamer in ino80 complex
32c2c9oA_



not modelled 99.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
33c6genX_



not modelled 99.9 24
PDB header:nuclear protein
Chain: X: PDB Molecule:ruvb-like protein 1;
PDBTitle: chromatin remodeller-nucleosome complex at 4.5 a resolution.
34c6blbA_



not modelled 99.9 24
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 1.88 angstrom resolution crystal structure holliday junction atp-2 dependent dna helicase (ruvb) from pseudomonas aeruginosa in complex3 with adp
35c3jc54_



not modelled 99.9 23
PDB header:hydrolase
Chain: 4: PDB Molecule:dna replication licensing factor mcm4;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
36c5a8jA_



not modelled 99.9 14
PDB header:transcription
Chain: A: PDB Molecule:vwa2;
PDBTitle: crystal structure of the arnb paralog vwa2 from2 sulfolobus acidocaldarius
37c6fpzA_



not modelled 99.9 19
PDB header:structural protein
Chain: A: PDB Molecule:inter-alpha-trypsin inhibitor heavy chain h1;
PDBTitle: inter-alpha-inhibitor heavy chain 1, d298a
38c6nyyC_



not modelled 99.9 17
PDB header:translocase
Chain: C: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
39c3pvsA_



not modelled 99.8 21
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
40c5g4gF_



not modelled 99.8 19
PDB header:hydrolase
Chain: F: PDB Molecule:vcp-like atpase;
PDBTitle: structure of the atpgs-bound vat complex
41c6nmiE_



not modelled 99.8 16
PDB header:transcription
Chain: E: PDB Molecule:general transcription factor iih subunit 2, p44;
PDBTitle: cryo-em structure of the human tfiih core complex
42c3uk6H_



not modelled 99.8 21
PDB header:hydrolase
Chain: H: PDB Molecule:ruvb-like 2;
PDBTitle: crystal structure of the tip48 (tip49b) hexamer
43c6o9l6_



not modelled 99.8 16
PDB header:transcription/dna
Chain: 6: PDB Molecule:general transcription factor iih subunit 2;
PDBTitle: human holo-pic in the closed state
44c2x31F_



not modelled 99.8 34
PDB header:ligase
Chain: F: PDB Molecule:magnesium-chelatase 60 kda subunit;
PDBTitle: modelling of the complex between subunits bchi and bchd of magnesium2 chelatase based on single-particle cryo-em reconstruction at 7.5 ang
45c3pfiB_



not modelled 99.8 19
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
46c1in8A_



not modelled 99.8 18
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction dna helicase ruvb;
PDBTitle: thermotoga maritima ruvb t158v
47c4rckB_



not modelled 99.8 25
PDB header:membrane protein
Chain: B: PDB Molecule:hypothetical membrane spanning protein;
PDBTitle: crystal structure of uncharacterized membrane spanning protein from2 vibrio fischeri
48d1ixsb2



not modelled 99.8 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
49c2dhrC_



not modelled 99.8 21
PDB header:hydrolase
Chain: C: PDB Molecule:ftsh;
PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
50c2c9oC_



not modelled 99.8 17
PDB header:hydrolase
Chain: C: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
51c1rs0A_



not modelled 99.8 15
PDB header:hydrolase
Chain: A: PDB Molecule:complement factor b;
PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip)
52d1in4a2



not modelled 99.8 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
53c5e7pA_



not modelled 99.8 26
PDB header:hydrolase
Chain: A: PDB Molecule:cell division control protein cdc48;
PDBTitle: crystal structure of msmeg_0858 (uniprot a0qqs4), a aaa atpase.
54c2i6sA_



not modelled 99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:complement c2a fragment;
PDBTitle: complement component c2a
55c1xxhB_



not modelled 99.8 21
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
56c3ibsA_



not modelled 99.8 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein batb;
PDBTitle: crystal structure of conserved hypothetical protein batb from2 bacteroides thetaiotaomicron
57c5iy70_



not modelled 99.8 15
PDB header:transcription, transferase/dna
Chain: 0: PDB Molecule:general transcription factor iih subunit 2;
PDBTitle: human holo-pic in the open state
58c4b4tW_



not modelled 99.8 14
PDB header:hydrolase
Chain: W: PDB Molecule:26s proteasome regulatory subunit rpn10;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
59c2ok5A_



not modelled 99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:complement factor b;
PDBTitle: human complement factor b
60d1um8a_



not modelled 99.8 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
61c6epdM_



not modelled 99.8 20
PDB header:hydrolase
Chain: M: PDB Molecule:26s proteasome regulatory subunit 6a;
PDBTitle: substrate processing state 26s proteasome (sps1)
62c3cf1C_



not modelled 99.8 17
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
63c6qi8E_



not modelled 99.8 23
PDB header:chaperone
Chain: E: PDB Molecule:ruvb-like 2;
PDBTitle: truncated human r2tp complex, structure 3 (adp-filled)
64c1hqcB_



not modelled 99.8 21
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb;
PDBTitle: structure of ruvb from thermus thermophilus hb8
65c6epcJ_



not modelled 99.8 16
PDB header:hydrolase
Chain: J: PDB Molecule:26s proteasome regulatory subunit 8;
PDBTitle: ground state 26s proteasome (gs2)
66c4b4tK_



not modelled 99.8 20
PDB header:hydrolase
Chain: K: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
67d1g41a_



not modelled 99.8 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
68d2ok5a1



not modelled 99.8 15
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
69c4b4tH_



not modelled 99.8 22
PDB header:hydrolase
Chain: H: PDB Molecule:26s protease regulatory subunit 7 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
70d1r6bx3



not modelled 99.8 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
71c3b9pA_



not modelled 99.8 24
PDB header:hydrolase
Chain: A: PDB Molecule:cg5977-pa, isoform a;
PDBTitle: spastin
72c5vq9D_



not modelled 99.8 18
PDB header:protein binding
Chain: D: PDB Molecule:pachytene checkpoint protein 2 homolog;
PDBTitle: structure of human trip13, apo form
73c1qvrB_



not modelled 99.8 23
PDB header:chaperone
Chain: B: PDB Molecule:clpb protein;
PDBTitle: crystal structure analysis of clpb
74c4b4tI_



not modelled 99.8 16
PDB header:hydrolase
Chain: I: PDB Molecule:26s protease regulatory subunit 4 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
75c3jbrF_



not modelled 99.8 13
PDB header:membrane protein
Chain: F: PDB Molecule:voltage-dependent calcium channel subunit alpha-2/delta-1;
PDBTitle: cryo-em structure of the rabbit voltage-gated calcium channel cav1.12 complex at 4.2 angstrom
76c4fw9A_



not modelled 99.8 23
PDB header:hydrolase
Chain: A: PDB Molecule:ttc1975 peptidase;
PDBTitle: crystal structure of the lon-like protease mtalonc
77c1r6bX_



not modelled 99.8 19
PDB header:hydrolase
Chain: X: PDB Molecule:clpa protein;
PDBTitle: high resolution crystal structure of clpa
78c4ww4B_



not modelled 99.8 24
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb-like 2;
PDBTitle: double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
79c2chgB_



not modelled 99.7 17
PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
80c6matE_



not modelled 99.7 19
PDB header:ribosomal protein
Chain: E: PDB Molecule:rix7 mutant;
PDBTitle: cryo-em structure of the essential ribosome assembly aaa-atpase rix7
81d1sxjc2



not modelled 99.7 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
82c4b4tL_



not modelled 99.7 22
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
83c6hecH_



not modelled 99.7 21
PDB header:hydrolase
Chain: H: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: pan-proteasome in state 4
84c4b4tJ_



not modelled 99.7 16
PDB header:hydrolase
Chain: J: PDB Molecule:26s protease regulatory subunit 8 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
85c1sxjC_



not modelled 99.7 15
PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
86c5kzfJ_



not modelled 99.7 17
PDB header:hydrolase
Chain: J: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of near full-length hexameric mycobacterium2 tuberculosis proteasomal atpase mpa in apo form
87c3pxiB_



not modelled 99.7 20
PDB header:protein binding
Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb;
PDBTitle: structure of meca108:clpc
88c2x5nA_



not modelled 99.7 11
PDB header:nuclear protein
Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn10;
PDBTitle: crystal structure of the sprpn10 vwa domain
89d1ofha_



not modelled 99.7 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
90c1xwiA_



not modelled 99.7 17
PDB header:protein transport
Chain: A: PDB Molecule:skd1 protein;
PDBTitle: crystal structure of vps4b
91c5gjvF_



not modelled 99.7 14
PDB header:membrane protein
Chain: F: PDB Molecule:voltage-dependent calcium channel subunit alpha-2/delta-1;
PDBTitle: structure of the mammalian voltage-gated calcium channel cav1.12 complex at near atomic resolution
92c6nyyA_



not modelled 99.7 16
PDB header:translocase
Chain: A: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
93c2chvE_



not modelled 99.7 17
PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
94c6az0A_



not modelled 99.7 19
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial inner membrane i-aaa protease supercomplex
PDBTitle: mitochondrial atpase protease yme1
95c4lcbA_



not modelled 99.7 17
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein cdvc, vps4;
PDBTitle: structure of vps4 homolog from acidianus hospitalis
96c4ciuA_



not modelled 99.7 18
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein clpb;
PDBTitle: crystal structure of e. coli clpb
97c4wfqA_



not modelled 99.7 18
PDB header:transcription
Chain: A: PDB Molecule:suppressor of stem-loop protein 1;
PDBTitle: crystal structure of tfiih subunit
98d1sxjb2



not modelled 99.7 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
99c3d8bB_



not modelled 99.7 19
PDB header:hydrolase
Chain: B: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
100c3cf2B_



not modelled 99.7 24
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/amp-pnp
101c5oqj6_



not modelled 99.7 20
PDB header:transcription
Chain: 6: PDB Molecule:suppressor of stem-loop protein 1;
PDBTitle: structure of yeast transcription pre-initiation complex with tfiih
102c5mpaL_



not modelled 99.7 22
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: 26s proteasome in presence of atp (s2)
103c6azyA_



not modelled 99.7 18
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein hsp104;
PDBTitle: crystal structure of hsp104 r328m/r757m mutant from calcarisporiella2 thermophila
104c1ojlD_



not modelled 99.7 23
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
105d1sxjd2



not modelled 99.7 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
106c3hu2C_



not modelled 99.7 22
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs
107c5ifwB_



not modelled 99.7 19
PDB header:signaling protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: quantitative interaction mapping reveals an extended ubiquitin2 regulatory domain in aspl that disrupts functional p97 hexamers and3 induces cell death
108c5gjqL_



not modelled 99.7 21
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease regulatory subunit 10b;
PDBTitle: structure of the human 26s proteasome bound to usp14-ubal
109c3vfdA_



not modelled 99.7 21
PDB header:hydrolase
Chain: A: PDB Molecule:spastin;
PDBTitle: human spastin aaa domain
110d1njfa_



not modelled 99.7 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
111d1ny5a2



not modelled 99.7 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
112c3hteC_



not modelled 99.7 19
PDB header:motor protein
Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx;
PDBTitle: crystal structure of nucleotide-free hexameric clpx
113c5exsA_



not modelled 99.7 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator fleq;
PDBTitle: aaa+ atpase fleq from pseudomonas aeruginosa bound to atp-gamma-s
114c4l16A_



not modelled 99.7 22
PDB header:hydrolase
Chain: A: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of figl-1 aaa domain in complex with adp
115d1iqpa2



not modelled 99.7 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
116d1r6bx2



not modelled 99.7 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
117c2ce7B_



not modelled 99.7 18
PDB header:cell division protein
Chain: B: PDB Molecule:cell division protein ftsh;
PDBTitle: edta treated
118c5d4wB_



not modelled 99.7 16
PDB header:chaperone
Chain: B: PDB Molecule:putative heat shock protein;
PDBTitle: crystal structure of hsp104
119c5kneD_



not modelled 99.7 19
PDB header:chaperone
Chain: D: PDB Molecule:heat shock protein 104;
PDBTitle: cryoem reconstruction of hsp104 hexamer
120c4d2qC_



not modelled 99.7 20
PDB header:chaperone
Chain: C: PDB Molecule:clpb;
PDBTitle: negative-stain electron microscopy of e. coli clpb mutant e432a (bap2 form bound to clpp)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below