Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2862c_(-)_3174069_3174653
DateWed Aug 7 12:50:53 BST 2019
Unique Job ID227d87b91e48a957
SequenceMTETGGDMVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:43.264 Y:32.671 Z:46.093
Model (left) based on template c4qrkA_
Top template information
PDB header:cell adhesion
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a putative cell adhesion protein (clospo_03726)2 from clostridium sporogenes atcc 15579 at 1.95 a resolution
Confidence and coverage
Confidence: 98.3% Coverage: 45%
88 residues ( 45% of your sequence) have been modelled with 98.3% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4qrkA_



98.3 15
PDB header:cell adhesion
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a putative cell adhesion protein (clospo_03726)2 from clostridium sporogenes atcc 15579 at 1.95 a resolution
2d2pp4a1



53.4 14
Fold:TAFH domain-like
Superfamily:TAFH domain-like
Family:TAFH domain-like
3d2p12a1



45.2 25
Fold:FomD barrel-like
Superfamily:FomD-like
Family:FomD-like
4d2p6va1



40.0 19
Fold:TAFH domain-like
Superfamily:TAFH domain-like
Family:TAFH domain-like
5d1khia2



38.8 39
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
6d2caza1



37.5 19
Fold:Long alpha-hairpin
Superfamily:Endosomal sorting complex assembly domain
Family:VPS23 C-terminal domain
7c2cazD_



37.2 19
PDB header:protein transport
Chain: D: PDB Molecule:suppressor protein stp22 of temperature-sensitive alpha-
PDBTitle: escrt-i core
8d2f6ma1



35.5 19
Fold:Long alpha-hairpin
Superfamily:Endosomal sorting complex assembly domain
Family:VPS23 C-terminal domain
9c4egeA_



29.4 25
PDB header:hydrolase
Chain: A: PDB Molecule:dipeptidase pepe;
PDBTitle: crystal structure of dipeptidase pepe from mycobacterium ulcerans
10c2p22A_



26.8 26
PDB header:transport protein
Chain: A: PDB Molecule:suppressor protein stp22 of temperature-sensitive alpha-
PDBTitle: structure of the yeast escrt-i heterotetramer core
11c3e56A_



23.5 31
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the 2.0 angstrom resolution crystal structure of npr1517, a putative2 heterocyst differentiation inhibitor from nostoc punctiforme
12c3vdoB_



21.4 18
PDB header:dna binding protein/protein binding
Chain: B: PDB Molecule:anti-sigma-k factor rska;
PDBTitle: structure of extra-cytoplasmic function(ecf) sigma factor sigk in2 complex with its negative regulator rska from mycobacterium3 tuberculosis
13c4nxiB_



21.0 30
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: rv2466c mediates the activation of tp053 to kill replicating and non-2 replicating mycobacterium tuberculosis
14c1ponB_



20.7 36
PDB header:calcium-binding protein
Chain: B: PDB Molecule:troponin c;
PDBTitle: site iii-site iv troponin c heterodimer, nmr
15c3nctC_



19.5 16
PDB header:dna binding protein, chaperone
Chain: C: PDB Molecule:protein psib;
PDBTitle: x-ray crystal structure of the bacterial conjugation factor psib, a2 negative regulator of reca
16c3i38K_



18.0 16
PDB header:chaperone
Chain: K: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
17c6cumA_



17.6 32
PDB header:transferase
Chain: A: PDB Molecule:lao/ao transport system atpase;
PDBTitle: crystal structure of a c-terminal proteolytic fragment of a protein2 annotated as an lao/ao transport system atpase but likely meab and3 mmaa-like gtpase from mycobacterium smegmatis
18c3i38D_



17.3 16
PDB header:chaperone
Chain: D: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
19c3i38B_



17.0 16
PDB header:chaperone
Chain: B: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
20c3i38G_



16.6 16
PDB header:chaperone
Chain: G: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
21c3i38A_



not modelled 16.6 16
PDB header:chaperone
Chain: A: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
22d1x6oa2



not modelled 16.5 17
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
23c5j73A_



not modelled 16.4 20
PDB header:de novo protein
Chain: A: PDB Molecule:protein design 2l4hc2_9;
PDBTitle: de novo design of protein homo-oligomers with modular hydrogen bond2 network-mediated specificity
24d1xxfc_



not modelled 16.1 17
Fold:Ecotin, trypsin inhibitor
Superfamily:Ecotin, trypsin inhibitor
Family:Ecotin, trypsin inhibitor
25c3i38E_



not modelled 15.9 17
PDB header:chaperone
Chain: E: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
26c3i38C_



not modelled 15.9 17
PDB header:chaperone
Chain: C: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
27d2f6mb1



not modelled 15.9 11
Fold:Long alpha-hairpin
Superfamily:Endosomal sorting complex assembly domain
Family:VPS28 N-terminal domain
28d2cazb1



not modelled 15.8 11
Fold:Long alpha-hairpin
Superfamily:Endosomal sorting complex assembly domain
Family:VPS28 N-terminal domain
29c2cazB_



not modelled 15.8 11
PDB header:protein transport
Chain: B: PDB Molecule:vacuolar protein sorting-associated protein vps28;
PDBTitle: escrt-i core
30c2y6tE_



not modelled 15.8 25
PDB header:hydrolase/inhibitor
Chain: E: PDB Molecule:ecotin;
PDBTitle: molecular recognition of chymotrypsin by the serine protease inhibitor2 ecotin from yersinia pestis
31c2f7nA_



not modelled 15.8 8
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding stress response protein, dps family;
PDBTitle: structure of d. radiodurans dps-1
32d1kxpd3



not modelled 15.8 11
Fold:Serum albumin-like
Superfamily:Serum albumin-like
Family:Serum albumin-like
33d1slua_



not modelled 15.3 17
Fold:Ecotin, trypsin inhibitor
Superfamily:Ecotin, trypsin inhibitor
Family:Ecotin, trypsin inhibitor
34d1ug3a1



not modelled 15.0 18
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like
35d3orca_



not modelled 14.5 13
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
36c4n7vC_



not modelled 14.3 55
PDB header:cell cycle
Chain: C: PDB Molecule:centrosomal protein of 152 kda;
PDBTitle: crystal structure of human plk4 cryptic polo box (cpb) in complex with2 a cep152 n-terminal fragment
37c2kq1A_



not modelled 14.1 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:bh0266 protein;
PDBTitle: solution structure of protein bh0266 from bacillus2 halodurans. northeast structural genomics consortium target3 bhr97a
38c3i38L_



not modelled 14.0 17
PDB header:chaperone
Chain: L: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
39c3li6D_



not modelled 13.4 13
PDB header:metal binding protein
Chain: D: PDB Molecule:calcium-binding protein;
PDBTitle: crystal structure and trimer-monomer transition of n-terminal domain2 of ehcabp1 from entamoeba histolytica
40c2bh1Y_



not modelled 13.4 27
PDB header:transport protein
Chain: Y: PDB Molecule:general secretion pathway protein e,;
PDBTitle: x-ray structure of the general secretion pathway complex of2 the n-terminal domain of epse and the cytosolic domain of3 epsl of vibrio cholerae
41d2bh1x1



not modelled 13.4 27
Fold:Alpha-lytic protease prodomain-like
Superfamily:EspE N-terminal domain-like
Family:GSPII protein E N-terminal domain-like
42c6mi5X_



not modelled 13.0 20
PDB header:metal binding protein
Chain: X: PDB Molecule:lanmodulin;
PDBTitle: nmr solution structure of lanmodulin (lanm) complexed with2 yttrium(iii) ions
43c3i38F_



not modelled 12.7 16
PDB header:chaperone
Chain: F: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
44c3sqlB_



not modelled 11.9 17
PDB header:hydrolase
Chain: B: PDB Molecule:glycosyl hydrolase family 3;
PDBTitle: crystal structure of glycoside hydrolase from synechococcus
45c2dhyA_



not modelled 11.9 14
PDB header:immune system
Chain: A: PDB Molecule:cue domain-containing protein 1;
PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1)
46c3l6aA_



not modelled 11.5 24
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 4 gamma 2;
PDBTitle: crystal structure of the c-terminal region of human p97
47c6b2zd_



not modelled 11.3 44
PDB header:membrane protein
Chain: D: PDB Molecule:atp synthase subunit c, mitochondrial;
PDBTitle: cryo-em structure of the dimeric fo region of yeast mitochondrial atp2 synthase
48c6qfjA_



not modelled 11.1 8
PDB header:transport protein
Chain: A: PDB Molecule:magnetosome membrane protein mamb, putative co/zn/cd cation
PDBTitle: mamb ctd magnetosome protein [desulfamplus magnetovallimortis bw-1]
49d1yfna1



not modelled 11.0 26
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
50c3fpnA_



not modelled 10.9 16
PDB header:dna binding protein
Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction domain;
PDBTitle: crystal structure of uvra-uvrb interaction domains
51c5cuvB_



not modelled 10.9 16
PDB header:metal binding protein
Chain: B: PDB Molecule:acidocalcisomal pyrophosphatase;
PDBTitle: crystal structure of trypanosoma cruzi vacuolar soluble2 pyrophosphatases in apo form
52c2vrgA_



not modelled 10.9 40
PDB header:transport
Chain: A: PDB Molecule:multiple coagulation factor deficiency protein 2;
PDBTitle: structure of human mcfd2
53c3i38H_



not modelled 10.7 16
PDB header:chaperone
Chain: H: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
54d1ou9a_



not modelled 10.6 28
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
55c4v0xB_



not modelled 10.6 36
PDB header:hydrolase/hydrolase regulator
Chain: B: PDB Molecule:protein phosphatase 1 regulatory subunit 15b;
PDBTitle: the crystal structure of mouse pp1g in complex with truncated human2 ppp1r15b (631-684)
56c5hjhB_



not modelled 10.2 5
PDB header:metal binding protein
Chain: B: PDB Molecule:ferritin, dps family protein;
PDBTitle: dps4 from nostoc punctiforme in complex with fe ions
57c3i38J_



not modelled 10.0 16
PDB header:chaperone
Chain: J: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
58c3fsdA_



not modelled 10.0 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ntf2-like protein of unknown function in nutrient uptake;
PDBTitle: crystal structure of ntf2-like protein of unknown function in nutrient2 uptake (yp_427473.1) from rhodospirillum rubrum atcc 11170 at 1.70 a3 resolution
59c5eu0B_



not modelled 9.9 20
PDB header:toxin
Chain: B: PDB Molecule:antitoxin 1;
PDBTitle: fic domain of bep1 from bartonella rochalimae in complex with biaa
60c1ug3A_



not modelled 9.7 18
PDB header:translation
Chain: A: PDB Molecule:eukaryotic protein synthesis initiation factor
PDBTitle: c-terminal portion of human eif4gi
61c3lsgD_



not modelled 9.6 0
PDB header:transcription regulator
Chain: D: PDB Molecule:two-component response regulator yesn;
PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586
62d1jmxa1



not modelled 9.6 28
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
63c3iq1A_



not modelled 9.5 14
PDB header:metal transport
Chain: A: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins
64c2yzyA_



not modelled 9.3 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ttha1012;
PDBTitle: crystal structure of uncharacterized conserved protein from thermus2 thermophilus hb8
65c1wr2A_



not modelled 9.2 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph1789;
PDBTitle: crystal structure of ph1788 from pyrococcus horikoshii ot3
66c6odmK_



not modelled 9.2 20
PDB header:viral protein
Chain: K: PDB Molecule:capsid vertex component 2;
PDBTitle: herpes simplex virus type 1 (hsv-1) portal vertex-adjacent2 capsid/catc, asymmetric unit
67d1ctda_



not modelled 9.1 31
Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
68c5hqhA_



not modelled 9.0 18
PDB header:unknown function
Chain: A: PDB Molecule:lmo2119 protein;
PDBTitle: 1.32 angstrom crystal structure of ybbr like domain of lmo2119 protein2 from listeria monocytogenes.
69d1ulza1



not modelled 8.7 11
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:BC C-terminal domain-like
70c4il1A_



not modelled 8.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:calmodulin, calcineurin subunit b type 1, serine/threonine-
PDBTitle: crystal structure of the rat calcineurin
71c6e5fA_



not modelled 8.6 10
PDB header:lipid binding protein
Chain: A: PDB Molecule:lipid binding protein lpqn;
PDBTitle: crystal structure of lpqn involved in cell envelope biogenesis of2 mycobacterium tuberculosis
72c4ol4A_



not modelled 8.6 13
PDB header:lipid binding protein
Chain: A: PDB Molecule:proline-rich 28 kda antigen;
PDBTitle: crystal structure of secreted proline rich antigen mtc28 (rv0040c)2 from mycobacterium tuberculosis
73d1ezsa_



not modelled 8.6 13
Fold:Ecotin, trypsin inhibitor
Superfamily:Ecotin, trypsin inhibitor
Family:Ecotin, trypsin inhibitor
74c5bzaA_



not modelled 8.5 15
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: crystal structure of cbsa from thermotoga neapolitana
75c4r60A_



not modelled 8.5 31
PDB header:hydrolase
Chain: A: PDB Molecule:proline dipeptidase;
PDBTitle: crystal structure of xaa-pro dipeptidase from xanthomonas campestris
76c5wzeC_



not modelled 8.4 13
PDB header:hydrolase
Chain: C: PDB Molecule:aminopeptidase p;
PDBTitle: the structure of pseudomonas aeruginosa aminopeptidase pepp
77c3h96B_



not modelled 8.4 18
PDB header:flavoprotein
Chain: B: PDB Molecule:f420-h2 dependent reductase a;
PDBTitle: msmeg_3358 f420 reductase
78c1t7lA_



not modelled 8.4 16
PDB header:transferase
Chain: A: PDB Molecule:5-methyltetrahydropteroyltriglutamate--homocysteine
PDBTitle: crystal structure of cobalamin-independent methionine synthase from t.2 maritima
79c4xaeB_



not modelled 8.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:feruloyl coa ortho-hydroxylase 1;
PDBTitle: structure of feruloyl-coa 6-hydroxylase (f6h) from arabidopsis2 thaliana
80d1s6ja_



not modelled 8.2 30
Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
81d1pvaa_



not modelled 8.1 41
Fold:EF Hand-like
Superfamily:EF-hand
Family:Parvalbumin
82c3es5A_



not modelled 8.0 17
PDB header:virus
Chain: A: PDB Molecule:putative capsid protein;
PDBTitle: crystal structure of partitivirus (psv-f)
83c5zx9A_



not modelled 7.9 24
PDB header:protein binding
Chain: A: PDB Molecule:alanine and proline-rich secreted protein apa;
PDBTitle: crystal structure of a protein from mycobacterium
84c3ndqA_



not modelled 7.9 25
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor a protein 1;
PDBTitle: structure of human tfiis domain ii
85c3ppgA_



not modelled 7.8 23
PDB header:transferase
Chain: A: PDB Molecule:5-methyltetrahydropteroyltriglutamate--homocysteine
PDBTitle: crystal structure of the candida albicans methionine synthase by2 surface entropy reduction, alanine variant with zinc
86c2nszA_



not modelled 7.7 17
PDB header:antitumor protein
Chain: A: PDB Molecule:programmed cell death protein 4;
PDBTitle: 1.15 angstrom crystal structure of the ma3 domain of pdcd4
87c2ionA_



not modelled 7.7 17
PDB header:antitumor protein
Chain: A: PDB Molecule:programmed cell death 4, pdcd4;
PDBTitle: crystal structure of the c-terminal ma3 domain of pdcd4 (mouse); form2
88d2nsza1



not modelled 7.7 17
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like
89c2mxtA_



not modelled 7.5 14
PDB header:splicing
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein q;
PDBTitle: nmr structure of the acidic domain of syncrip (hnrnpq)
90d1tjoa_



not modelled 7.5 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
91d1br1b_



not modelled 7.3 15
Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
92c6iieA_



not modelled 7.2 17
PDB header:transferase
Chain: A: PDB Molecule:diacylglycerol kinase alpha;
PDBTitle: crystal structure of human diacylglycerol kinase alpha ef-hand domains2 bound to ca2+
93c6a9vA_



not modelled 7.2 20
PDB header:hydrolase
Chain: A: PDB Molecule:intermediate cleaving peptidase 55;
PDBTitle: crystal structure of icp55 from saccharomyces cerevisiae (n-terminal2 42 residues deletion)
94c2iosA_



not modelled 7.2 18
PDB header:antitumor protein
Chain: A: PDB Molecule:programmed cell death 4, pdcd4;
PDBTitle: crystal structure of the c-terminal ma3 domain of pdcd42 (mouse); form 3
95d5pala_



not modelled 7.1 29
Fold:EF Hand-like
Superfamily:EF-hand
Family:Parvalbumin
96d1x4pa1



not modelled 7.0 28
Fold:Surp module (SWAP domain)
Superfamily:Surp module (SWAP domain)
Family:Surp module (SWAP domain)
97c2bpbB_



not modelled 7.0 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b;
PDBTitle: sulfite dehydrogenase from starkeya novella
98c5aooA_



not modelled 7.0 16
PDB header:virus
Chain: A: PDB Molecule:vp0;
PDBTitle: x-ray structure of a human kobuvirus: aichi virus a (aiv)
99c3lz8A_



not modelled 6.9 16
PDB header:chaperone
Chain: A: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone dnaj from klebsiella pneumoniae2 subsp. pneumoniae mgh 78578 at 2.9 a resolution.

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