Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2885c_(-)_3194176_3195558
DateThu Aug 8 16:20:03 BST 2019
Unique Job IDd68b8b893d0ab2c4
SequenceVMARLKVPEG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:64.763 Y:49.762 Z:60.289
Model (left) based on template c6e7aY_
Top template information
PDB header:dna binding protein/dna/rna
Chain: Y: PDB Molecule:casx;
PDBTitle: casx-grna-dna(30bp) state ii
Confidence and coverage
Confidence: 98.9% Coverage: 42%
192 residues ( 42% of your sequence) have been modelled with 98.9% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6e7aY_
98.9 20
PDB header:dna binding protein/dna/rna
Chain: Y: PDB Molecule:casx;
PDBTitle: casx-grna-dna(30bp) state ii
2c5id6A_
98.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:cpf1;
PDBTitle: structure of cpf1/rna complex
3c5wtiZ_
98.4 18
PDB header:hydrolase/dna/rna
Chain: Z: PDB Molecule:crispr-associated protein;
PDBTitle: crystal structure of the crispr-associated protein in complex with2 crrna and dna
4c6iv6A_
98.3 19
PDB header:immune system/rna
Chain: A: PDB Molecule:nuclease;
PDBTitle: cryo-em structure of acrva5-acetylated mbcas12a in complex with crrna
5c5b43A_
98.2 22
PDB header:hydrolase/rna/dna
Chain: A: PDB Molecule:crispr-associated endonuclease cpf1;
PDBTitle: crystal structure of acidaminococcus sp. cpf1 in complex with crrna2 and target dna
6c5mgaA_
98.1 19
PDB header:hydrolase
Chain: A: PDB Molecule:crispr-associated endonuclease cpf1;
PDBTitle: structure of the cpf1 endonuclease r-loop complex after dna cleavage
7c5nfvA_
98.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:crispr-associated endonuclease cpf1;
PDBTitle: crystal structure of catalytically inactive fncas12 mutant bound to an2 r-loop structure containing a pre-crrna mimic and full-length dna3 target
8c5wqeA_
97.9 17
PDB header:rna binding protein
Chain: A: PDB Molecule:crispr-associated endonuclease c2c1;
PDBTitle: crystal structure of alicyclobacillus acidoterrestris c2c1 in complex2 with single-guide rna at 3.1 angstrom resolution
9c5u31A_
97.4 21
PDB header:hydrolase/dna
Chain: A: PDB Molecule:crispr-associated endonuclease c2c1;
PDBTitle: crystal structure of aacc2c1-sgrna-8mer substrate dna ternary complex
10c4u3eA_
95.1 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside triphosphate reductase;
PDBTitle: anaerobic ribonucleotide reductase
11c2gb5B_
94.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:nadh pyrophosphatase;
PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution
12c1hk8A_
94.9 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase;
PDBTitle: structural basis for allosteric substrate specificity regulation in2 class iii ribonucleotide reductases: nrdd in complex with dgtp
13d1hk8a_
94.9 12
Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:Class III anaerobic ribonucleotide reductase NRDD subunit
14c1yuzB_
93.2 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
15c3ky9B_
92.8 16
PDB header:apoptosis
Chain: B: PDB Molecule:proto-oncogene vav;
PDBTitle: autoinhibited vav1
16c2qa4Z_
92.6 27
PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: a more complete structure of the the l7/l12 stalk of the2 haloarcula marismortui 50s large ribosomal subunit
17c2vrwB_
92.5 18
PDB header:signaling protein
Chain: B: PDB Molecule:proto-oncogene vav;
PDBTitle: critical structural role for the ph and c1 domains of the2 vav1 exchange factor
18c4a17Y_
92.3 23
PDB header:ribosome
Chain: Y: PDB Molecule:rpl37a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
19c4b6ap_
92.2 27
PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l17-a;
PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1
20d2akla2
92.1 16
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:PhnA zinc-binding domain
21d1vqoz1
not modelled 92.0 27
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
22d1ffkw_
not modelled 92.0 19
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
23c3cc4Z_
not modelled 91.9 27
PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: co-crystal structure of anisomycin bound to the 50s ribosomal subunit
24c3izrm_
not modelled 91.8 19
PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l23 (l14p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
25c5fz5M_
not modelled 91.7 14
PDB header:transcription
Chain: M: PDB Molecule:transcription initiation factor iib;
PDBTitle: transcription initiation complex structures elucidate dna opening (cc)
26c3zf7o_
not modelled 91.7 35
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l13a, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
27d1pfta_
not modelled 91.7 21
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Transcriptional factor domain
28c3j39p_
not modelled 91.6 27
PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l17;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
29c2lcqA_
not modelled 91.6 12
PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
30c5iy9M_
not modelled 91.6 14
PDB header:transcription, transferase/dna/rna
Chain: M: PDB Molecule:transcription initiation factor iib;
PDBTitle: human holo-pic in the initial transcribing state (no iis)
31c3j21i_
not modelled 91.6 31
PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l13p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
32c2zkrz_
not modelled 91.5 27
PDB header:ribosomal protein/rna
Chain: Z: PDB Molecule:e site t-rna;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
33c3bjiA_
not modelled 91.5 18
PDB header:signaling protein
Chain: A: PDB Molecule:proto-oncogene vav;
PDBTitle: structural basis of promiscuous guanine nucleotide exchange2 by the t-cell essential vav1
34d1jj2y_
not modelled 91.4 19
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
35c6f42V_
not modelled 91.4 15
PDB header:transcription
Chain: V: PDB Molecule:transcription factor iiib 70 kda subunit;
PDBTitle: rna polymerase iii closed complex cc1.
36c1yshD_
not modelled 91.3 19
PDB header:structural protein/rna
Chain: D: PDB Molecule:ribosomal protein l37a;
PDBTitle: localization and dynamic behavior of ribosomal protein l30e
37c2aklA_
not modelled 91.3 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phna-like protein pa0128;
PDBTitle: solution structure for phn-a like protein pa0128 from2 pseudomonas aeruginosa
38c3k7aM_
not modelled 91.2 18
PDB header:transcription
Chain: M: PDB Molecule:transcription initiation factor iib;
PDBTitle: crystal structure of an rna polymerase ii-tfiib complex
39c1s1i9_
not modelled 90.6 27
PDB header:ribosome
Chain: 9: PDB Molecule:60s ribosomal protein l43;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s4 ribosomal subunit is in file 1s1h.
40c3k1fM_
not modelled 89.7 15
PDB header:transcription
Chain: M: PDB Molecule:transcription initiation factor iib;
PDBTitle: crystal structure of rna polymerase ii in complex with tfiib
41c3jyw9_
not modelled 89.7 27
PDB header:ribosome
Chain: 9: PDB Molecule:60s ribosomal protein l43;
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
42c6cnbR_
not modelled 89.6 15
PDB header:transcription/dna
Chain: R: PDB Molecule:transcription factor iiib 70 kda subunit,tata-box-binding
PDBTitle: yeast rna polymerase iii initial transcribing complex
43d1dl6a_
not modelled 89.3 15
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Transcriptional factor domain
44c4v1oM_
not modelled 89.3 19
PDB header:transcription
Chain: M: PDB Molecule:transcription initiation factor iib;
PDBTitle: architecture of the rna polymerase ii-mediator core transcription2 initiation complex
45c5iy9Q_
not modelled 89.1 22
PDB header:transcription, transferase/dna/rna
Chain: Q: PDB Molecule:general transcription factor iie subunit 1;
PDBTitle: human holo-pic in the initial transcribing state (no iis)
46c2hr5B_
not modelled 88.9 23
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
47c4c2mX_
not modelled 88.2 14
PDB header:transcription
Chain: X: PDB Molecule:dna-directed rna polymerase i subunit rpa12;
PDBTitle: structure of rna polymerase i at 2.8 a resolution
48c2qkdA_
not modelled 88.0 19
PDB header:signaling protein, cell cycle
Chain: A: PDB Molecule:zinc finger protein zpr1;
PDBTitle: crystal structure of tandem zpr1 domains
49c3cngC_
not modelled 87.5 22
PDB header:hydrolase
Chain: C: PDB Molecule:nudix hydrolase;
PDBTitle: crystal structure of nudix hydrolase from nitrosomonas europaea
50c3zyqA_
not modelled 87.5 21
PDB header:signaling
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine kinase
PDBTitle: crystal structure of the tandem vhs and fyve domains of hepatocyte2 growth factor-regulated tyrosine kinase substrate (hgs-hrs) at 1.48 a3 resolution
51c5ijlA_
not modelled 87.3 19
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase ii large subunit;
PDBTitle: d-family dna polymerase - dp2 subunit (catalytic subunit)
52c3wwnB_
not modelled 86.8 23
PDB header:metal binding protein/transferase
Chain: B: PDB Molecule:orff;
PDBTitle: crystal structure of lysz from thermus thermophilus complex with lysw
53c1i3qI_
not modelled 86.8 15
PDB header:transcription
Chain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd
PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution
54c1kcfB_
not modelled 86.8 14
PDB header:hydrolase
Chain: B: PDB Molecule:hypothetical 30.2 kd protein c25g10.02 in
PDBTitle: crystal structure of the yeast mitochondrial holliday2 junction resolvase, ydc2
55c1nnjA_
not modelled 86.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna
56c6g5iy_
not modelled 86.5 24
PDB header:ribosome
Chain: Y: PDB Molecule:40s ribosomal protein s24;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state r
57d1hjra_
not modelled 86.3 15
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:RuvC resolvase
58c1ee8A_
not modelled 86.3 26
PDB header:dna binding protein
Chain: A: PDB Molecule:mutm (fpg) protein;
PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8
59d1twfi2
not modelled 86.0 27
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Transcriptional factor domain
60c1dvpA_
not modelled 85.8 20
PDB header:transferase
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine
PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction
61c2opfA_
not modelled 85.8 22
PDB header:hydrolase/dna
Chain: A: PDB Molecule:endonuclease viii;
PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate
62c5flmI_
not modelled 85.7 17
PDB header:transcription
Chain: I: PDB Molecule:dna-directed rna polymerase ii subunit rpb9;
PDBTitle: structure of transcribing mammalian rna polymerase ii
63c6hmsB_
not modelled 85.4 19
PDB header:replication
Chain: B: PDB Molecule:dna polymerase ii large subunit,dna polymerase ii large
PDBTitle: cryo-em map of dna polymerase d from pyrococcus abyssi in complex with2 dna
64d1kcfa2
not modelled 85.3 18
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Mitochondrial resolvase ydc2 catalytic domain
65c2f9iD_
not modelled 85.2 16
PDB header:transferase
Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit
PDBTitle: crystal structure of the carboxyltransferase subunit of acc from2 staphylococcus aureus
66c3ndjA_
not modelled 84.9 29
PDB header:transferase
Chain: A: PDB Molecule:methyltransferase;
PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product
67c2f5qA_
not modelled 84.9 17
PDB header:hydrolase/dna
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase;
PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2
68c5fywW_
not modelled 84.8 15
PDB header:transcription
Chain: W: PDB Molecule:transcription initiation factor iie subunit alpha;
PDBTitle: transcription initiation complex structures elucidate dna opening (oc)
69c2kdxA_
not modelled 84.1 26
PDB header:metal-binding protein
Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein
PDBTitle: solution structure of hypa protein
70d2k4xa1
not modelled 84.0 22
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein S27a
71c1dvbA_
not modelled 83.5 26
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
72c2f9yB_
not modelled 82.9 20
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit
PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli
73d2f9yb1
not modelled 82.9 20
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
74d2fiya1
not modelled 82.8 19
Fold:FdhE-like
Superfamily:FdhE-like
Family:FdhE-like
75c1k82D_
not modelled 82.3 22
PDB header:hydrolase/dna
Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
76c2ba1B_
not modelled 80.4 19
PDB header:rna binding protein
Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4;
PDBTitle: archaeal exosome core
77c3w0fA_
not modelled 80.4 24
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease 8-like 3;
PDBTitle: crystal structure of mouse endonuclease viii-like 3 (mneil3)
78c4bpo9_
not modelled 80.2 23
PDB header:ribosome
Chain: 9: PDB Molecule:40s ribosomal protein rps31e;
PDBTitle: the crystal structure of the eukaryotic 40s ribosomal subunit in2 complex with eif1 and eif1a - complex 3
79c2xzn9_
not modelled 80.1 18
PDB header:ribosome
Chain: 9: PDB Molecule:rps31e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
80c6genS_
not modelled 80.1 27
PDB header:nuclear protein
Chain: S: PDB Molecule:vacuolar protein sorting-associated protein 71;
PDBTitle: chromatin remodeller-nucleosome complex at 4.5 a resolution.
81c2xzm9_
not modelled 80.0 18
PDB header:ribosome
Chain: 9: PDB Molecule:rps31e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
82c3h0gI_
not modelled 79.9 13
PDB header:transcription
Chain: I: PDB Molecule:dna-directed rna polymerase ii subunit rpb9;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
83d2ct7a1
not modelled 79.8 20
Fold:RING/U-box
Superfamily:RING/U-box
Family:IBR domain
84d1pfva3
not modelled 79.3 30
Fold:Rubredoxin-like
Superfamily:Methionyl-tRNA synthetase (MetRS), Zn-domain
Family:Methionyl-tRNA synthetase (MetRS), Zn-domain
85c3j3v0_
not modelled 79.1 19
PDB header:ribosome
Chain: 0: PDB Molecule:50s ribosomal protein l32;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 i-a)
86c3pfqA_
not modelled 79.0 18
PDB header:transferase
Chain: A: PDB Molecule:protein kinase c beta type;
PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
87c6gymW_
not modelled 78.7 20
PDB header:transcription
Chain: W: PDB Molecule:transcription initiation factor iie subunit alpha,
PDBTitle: structure of a yeast closed complex with distorted dna (ccdist)
88c5fmfR_
not modelled 78.7 15
PDB header:transcription
Chain: R: PDB Molecule:transcription initiation factor iie subunit alpha, tfa1;
PDBTitle: the p-lobe of rna polymerase ii pre-initiation complex
89c1pd0A_
not modelled 78.6 26
PDB header:transport protein
Chain: A: PDB Molecule:protein transport protein sec24;
PDBTitle: crystal structure of the copii coat subunit, sec24,2 complexed with a peptide from the snare protein sed53 (yeast syntaxin-5)
90d1qypa_
not modelled 78.3 28
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Transcriptional factor domain
91c5oqjW_
not modelled 78.0 20
PDB header:transcription
Chain: W: PDB Molecule:transcription initiation factor iie subunit alpha;
PDBTitle: structure of yeast transcription pre-initiation complex with tfiih
92c5x51X_
not modelled 77.7 29
PDB header:transferase
Chain: X: PDB Molecule:rna polymerase subunit, found in rna polymerase complexes
PDBTitle: rna polymerase ii from komagataella pastoris (type-3 crystal)
93c5oqmW_
not modelled 77.0 20
PDB header:transcription
Chain: W: PDB Molecule:transcription factor tfiie subunit;
PDBTitle: structure of yeast transcription pre-initiation complex with tfiih and2 core mediator
94c2eliA_
not modelled 76.8 18
PDB header:transferase
Chain: A: PDB Molecule:protein kinase c alpha type;
PDBTitle: solution structure of the second phorbol2 esters/diacylglycerol binding domain of human protein3 kinase c alpha type
95c3gn5B_
not modelled 76.7 14
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
96c4qiwP_
not modelled 76.5 23
PDB header:transcription
Chain: P: PDB Molecule:dna-directed rna polymerase subunit p;
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
97c5y06A_
not modelled 76.4 22
PDB header:unknown function
Chain: A: PDB Molecule:msmeg_4306;
PDBTitle: structural characterization of msmeg_4306 from mycobacterium smegmatis
98c2enzA_
not modelled 76.3 18
PDB header:transferase
Chain: A: PDB Molecule:protein kinase c theta type;
PDBTitle: solution structure of the second c1 domain from human2 protein kinase c theta
99c4rvgA_
not modelled 76.2 19
PDB header:transferase
Chain: A: PDB Molecule:d-mycarose 3-c-methyltransferase;
PDBTitle: crystal structure of mtmc in complex with sam and tdp
100c1m2vB_
not modelled 76.0 26
PDB header:protein transport
Chain: B: PDB Molecule:protein transport protein sec24;
PDBTitle: crystal structure of the yeast sec23/24 heterodimer
101d2j0151
not modelled 75.8 20
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L32p
102c3h0gL_
not modelled 75.6 25
PDB header:transcription
Chain: L: PDB Molecule:dna-directed rna polymerases i, ii, and iii subunit rpabc4;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
103c1nuiA_
not modelled 75.6 18
PDB header:replication
Chain: A: PDB Molecule:dna primase/helicase;
PDBTitle: crystal structure of the primase fragment of bacteriophage t7 primase-2 helicase protein
104c2zaeB_
not modelled 75.5 24
PDB header:hydrolase
Chain: B: PDB Molecule:ribonuclease p protein component 4;
PDBTitle: crystal structure of protein ph1601p in complex with protein ph1771p2 of archaeal ribonuclease p from pyrococcus horikoshii ot3
105c2nn6I_
not modelled 75.1 11
PDB header:hydrolase/transferase
Chain: I: PDB Molecule:3'-5' exoribonuclease csl4 homolog;
PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
106c3eg9B_
not modelled 74.6 22
PDB header:protein transport
Chain: B: PDB Molecule:sec24 related gene family, member d;
PDBTitle: crystal structure of the mammalian copii-coat protein sec23/24 bound2 to the transport signal sequence of membrin
107c3eh2B_
not modelled 74.4 26
PDB header:protein transport
Chain: B: PDB Molecule:protein transport protein sec24c;
PDBTitle: crystal structure of the human copii-coat protein sec24c
108c2nb9A_
not modelled 74.3 26
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of zitp zinc finger
109d1ptqa_
not modelled 74.3 15
Fold:Cysteine-rich domain
Superfamily:Cysteine-rich domain
Family:Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
110c1y8fA_
not modelled 74.2 12
PDB header:endocytosis/exocytosis,signaling protein
Chain: A: PDB Molecule:unc-13 homolog a;
PDBTitle: solution structure of the munc13-1 c1-domain
111d1xa6a3
not modelled 74.1 15
Fold:Cysteine-rich domain
Superfamily:Cysteine-rich domain
Family:Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
112d2zjrz1
not modelled 74.0 22
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L32p
113d1k3xa3
not modelled 73.9 22
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
114d1tbna_
not modelled 73.8 18
Fold:Cysteine-rich domain
Superfamily:Cysteine-rich domain
Family:Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
115c6o9lQ_
not modelled 73.8 22
PDB header:transcription/dna
Chain: Q: PDB Molecule:general transcription factor iie subunit 1;
PDBTitle: human holo-pic in the closed state
116c2ennA_
not modelled 73.7 21
PDB header:transferase
Chain: A: PDB Molecule:protein kinase c theta type;
PDBTitle: solution structure of the first c1 domain from human2 protein kinase c theta
117c2ja6L_
not modelled 73.3 17
PDB header:transferase
Chain: L: PDB Molecule:dna-directed rna polymerases i, ii, and iii 7.7 kda
PDBTitle: cpd lesion containing rna polymerase ii elongation complex b
118c6qg3P_
not modelled 73.3 24
PDB header:translation
Chain: P: PDB Molecule:eukaryotic translation initiation factor 2 subunit beta;
PDBTitle: structure of eif2b-eif2 (phosphorylated at ser51) complex (model b)
119c3a44D_
not modelled 73.3 19
PDB header:metal binding protein
Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa;
PDBTitle: crystal structure of hypa in the dimeric form
120c5flmL_
not modelled 73.2 22
PDB header:transcription
Chain: L: PDB Molecule:dna-directed rna polymerases i, ii, and iii subunit rpabc4;
PDBTitle: structure of transcribing mammalian rna polymerase ii

Binding site prediction 

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