Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2890c_(rpsB)_3199129_3199992
DateThu Aug 8 16:20:04 BST 2019
Unique Job ID1431e3aafc81de08
SequenceMAVVTMKQLL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:72.506 Y:47.480 Z:86.209
Model (left) based on template c4toiA_
Top template information
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s2,ribosomal protein s1;
PDBTitle: crystal structure of e.coli ribosomal protein s2 in complex with n-2 terminal domain of s1
Confidence and coverage
Confidence:100.0% Coverage: 99%
284 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4toiA_
100.0 44
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s2,ribosomal protein s1;
PDBTitle: crystal structure of e.coli ribosomal protein s2 in complex with n-2 terminal domain of s1
2c5o5jV_
100.0 96
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein s2;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
3d2uubb1
100.0 52
Fold:Flavodoxin-like
Superfamily:Ribosomal protein S2
Family:Ribosomal protein S2
4c3bbnB_
100.0 39
PDB header:ribosome
Chain: B: PDB Molecule:ribosomal protein s2;
PDBTitle: homology model for the spinach chloroplast 30s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome.
5d2gy9b1
100.0 53
Fold:Flavodoxin-like
Superfamily:Ribosomal protein S2
Family:Ribosomal protein S2
6c3j6vB_
100.0 30
PDB header:ribosome
Chain: B: PDB Molecule:28s ribosomal protein s2, mitochondrial;
PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
7c3iz6A_
100.0 22
PDB header:ribosome
Chain: A: PDB Molecule:40s ribosomal protein sa (s2p);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
8c3bchA_
100.0 26
PDB header:cell adhesion, ribosomal protein
Chain: A: PDB Molecule:40s ribosomal protein sa;
PDBTitle: crystal structure of the human laminin receptor precursor
9c3izbA_
100.0 22
PDB header:ribosome
Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
10c3j20B_
100.0 27
PDB header:ribosome
Chain: B: PDB Molecule:30s ribosomal protein s2p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
11c3zeyC_
100.0 27
PDB header:ribosome
Chain: C: PDB Molecule:40s ribosomal protein sa, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
12c2xznB_
100.0 28
PDB header:ribosome
Chain: B: PDB Molecule:rps0e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
13d1vi6a_
100.0 28
Fold:Flavodoxin-like
Superfamily:Ribosomal protein S2
Family:Ribosomal protein S2
14c2zkqb_
100.0 24
PDB header:ribosomal protein/rna
Chain: B: PDB Molecule:rna expansion segment es3;
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
15c1s1hB_
100.0 24
PDB header:ribosome
Chain: B: PDB Molecule:40s ribosomal protein s0-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s4 ribosomal subunit is in file 1s1i.
16c5xyiA_
100.0 27
PDB header:ribosome
Chain: A: PDB Molecule:40s ribosomal protein sa;
PDBTitle: small subunit of trichomonas vaginalis ribosome
17d1x94a_
97.6 18
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
18d1tk9a_
97.2 17
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
19c2x3yA_
97.1 16
PDB header:isomerase
Chain: A: PDB Molecule:phosphoheptose isomerase;
PDBTitle: crystal structure of gmha from burkholderia pseudomallei
20c5i01B_
96.2 15
PDB header:isomerase
Chain: B: PDB Molecule:phosphoheptose isomerase;
PDBTitle: structure of phosphoheptose isomerase gmha from neisseria gonorrhoeae
21d1x92a_
not modelled 95.9 13
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
22c1nriA_
not modelled 95.3 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein hi0754;
PDBTitle: crystal structure of putative phosphosugar isomerase hi0754 from2 haemophilus influenzae
23d1nria_
not modelled 95.3 14
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
24c2yvaB_
not modelled 94.7 14
PDB header:dna binding protein
Chain: B: PDB Molecule:dnaa initiator-associating protein diaa;
PDBTitle: crystal structure of escherichia coli diaa
25c3shoA_
not modelled 94.3 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, rpir family;
PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)
26d1m3sa_
not modelled 93.8 13
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
27c5by2A_
not modelled 93.7 13
PDB header:isomerase
Chain: A: PDB Molecule:phosphoheptose isomerase;
PDBTitle: sedoheptulose 7-phosphate isomerase from colwellia psychrerythraea2 strain 34h
28c3trjC_
not modelled 93.0 18
PDB header:isomerase
Chain: C: PDB Molecule:phosphoheptose isomerase;
PDBTitle: structure of a phosphoheptose isomerase from francisella tularensis
29c4ivnB_
not modelled 92.4 21
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: the vibrio vulnificus nanr protein complexed with mannac-6p
30c4s12C_
not modelled 91.6 15
PDB header:lyase
Chain: C: PDB Molecule:n-acetylmuramic acid 6-phosphate etherase;
PDBTitle: 1.55 angstrom crystal structure of n-acetylmuramic acid 6-phosphate2 etherase from yersinia enterocolitica.
31c4lzjD_
not modelled 91.1 15
PDB header:lyase/lyase inhibitor
Chain: D: PDB Molecule:n-acetylmuramic acid 6-phosphate etherase;
PDBTitle: crystal structure of murq from h.influenzae with bound inhibitor
32c3knzA_
not modelled 90.0 22
PDB header:sugar binding protein
Chain: A: PDB Molecule:putative sugar binding protein;
PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution
33c2amlB_
not modelled 89.8 12
PDB header:transferase
Chain: B: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution
34c3fxaA_
not modelled 88.0 16
PDB header:sugar binding protein
Chain: A: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution
35c2a3nA_
not modelled 85.9 22
PDB header:sugar binding protein
Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase;
PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution
36d1vima_
not modelled 85.2 12
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
37c5uqiA_
not modelled 84.8 13
PDB header:isomerase
Chain: A: PDB Molecule:phosphosugar isomerase;
PDBTitle: e. coli cft073 c3406 in complex with a5p
38c3cvjB_
not modelled 83.9 18
PDB header:isomerase
Chain: B: PDB Molecule:putative phosphoheptose isomerase;
PDBTitle: crystal structure of a putative phosphoheptose isomerase (bh3325) from2 bacillus halodurans c-125 at 2.00 a resolution
39c6dspB_
not modelled 83.8 20
PDB header:signaling protein
Chain: B: PDB Molecule:autoinducer 2-binding protein lsrb;
PDBTitle: lsrb from clostridium saccharobutylicum in complex with ai-2
40c3c65A_
not modelled 82.2 12
PDB header:hydrolase
Chain: A: PDB Molecule:uvrabc system protein c;
PDBTitle: crystal structure of bacillus stearothermophilus uvrc 5' endonuclease2 domain
41c4hwgA_
not modelled 79.9 18
PDB header:isomerase
Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase;
PDBTitle: structure of udp-n-acetylglucosamine 2-epimerase from rickettsia2 bellii
42d1kzyc2
not modelled 77.9 23
Fold:BRCT domain
Superfamily:BRCT domain
Family:53BP1
43c2nrrA_
not modelled 71.3 18
PDB header:hydrolase
Chain: A: PDB Molecule:uvrabc system protein c;
PDBTitle: crystal structure of the c-terminal rnaseh endonuclase domain of uvrc
44d1jeoa_
not modelled 68.6 15
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
45d1l7ba_
not modelled 66.1 23
Fold:BRCT domain
Superfamily:BRCT domain
Family:DNA ligase
46c3etnD_
not modelled 65.1 19
PDB header:isomerase
Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule
PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution
47d1pjqa1
not modelled 64.7 13
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Siroheme synthase N-terminal domain-like
48c4nspA_
not modelled 64.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease v;
PDBTitle: crystal structure of human endov
49c4ys6A_
not modelled 63.5 18
PDB header:solute-binding protein
Chain: A: PDB Molecule:putative solute-binding component of abc transporter;
PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from clostridium phytofermentans (cphy_1585, target efi-3 511156) with bound beta-d-glucose
50c4wzzA_
not modelled 63.1 22
PDB header:transport protein
Chain: A: PDB Molecule:putative sugar abc transporter, substrate-binding protein;
PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from clostridium phytofermentas (cphy_0583, target efi-3 511148) with bound l-rhamnose
51c3ga2A_
not modelled 60.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease v;
PDBTitle: crystal structure of the endonuclease_v (bsu36170) from bacillus2 subtilis, northeast structural genomics consortium target sr624
52c5ghrA_
not modelled 59.8 22
PDB header:dna binding protein/replication
Chain: A: PDB Molecule:ssdna-specific exonuclease;
PDBTitle: dna replication protein
53d2f9ya1
not modelled 59.7 28
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
54c2f9iC_
not modelled 58.9 28
PDB header:transferase
Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit
PDBTitle: crystal structure of the carboxyltransferase subunit of acc from2 staphylococcus aureus
55c1ir6A_
not modelled 58.5 19
PDB header:hydrolase
Chain: A: PDB Molecule:exonuclease recj;
PDBTitle: crystal structure of exonuclease recj bound to manganese
56d1ir6a_
not modelled 58.5 19
Fold:DHH phosphoesterases
Superfamily:DHH phosphoesterases
Family:Exonuclease RecJ
57c3hgtA_
not modelled 57.7 11
PDB header:transcription
Chain: A: PDB Molecule:hda1 complex subunit 3;
PDBTitle: structural and functional studies of the yeast class ii hda12 hdac complex
58c2r7aC_
not modelled 57.3 11
PDB header:transport protein
Chain: C: PDB Molecule:bacterial heme binding protein;
PDBTitle: crystal structure of a periplasmic heme binding protein from shigella2 dysenteriae
59c3gocB_
not modelled 55.5 20
PDB header:hydrolase
Chain: B: PDB Molecule:endonuclease v;
PDBTitle: crystal structure of the endonuclease v (sav1684) from streptomyces2 avermitilis. northeast structural genomics consortium target svr196
60c5f56A_
not modelled 54.7 18
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:single-stranded-dna-specific exonuclease;
PDBTitle: structure of recj complexed with dna and ssb-ct
61d1j5xa_
not modelled 54.0 16
Fold:SIS domain
Superfamily:SIS domain
Family:double-SIS domain
62c4wwhA_
not modelled 54.0 22
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter;
PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi-3 510967) with bound d-galactose
63c3cf4A_
not modelled 52.4 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit;
PDBTitle: structure of the codh component of the m. barkeri acds complex
64c1xnwD_
not modelled 51.8 20
PDB header:ligase
Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit;
PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i
65c4rxuA_
not modelled 51.7 22
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic sugar-binding protein;
PDBTitle: crystal structure of carbohydrate transporter solute binding protein2 caur_1924 from chloroflexus aurantiacus, target efi-511158, in3 complex with d-glucose
66d1pixa3
not modelled 51.0 26
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
67c6epcN_
not modelled 50.8 19
PDB header:hydrolase
Chain: N: PDB Molecule:26s proteasome non-atpase regulatory subunit 1;
PDBTitle: ground state 26s proteasome (gs2)
68c1pixB_
not modelled 49.7 18
PDB header:lyase
Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit;
PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase
69c3n6rF_
not modelled 49.2 15
PDB header:ligase
Chain: F: PDB Molecule:propionyl-coa carboxylase, beta subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
70d1f0ka_
not modelled 48.9 16
Fold:UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase
Family:Peptidoglycan biosynthesis glycosyltransferase MurG
71c4xpuA_
not modelled 48.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease v;
PDBTitle: the crystal structure of endov from e.coli
72c2w36B_
not modelled 48.0 24
PDB header:hydrolase
Chain: B: PDB Molecule:endonuclease v;
PDBTitle: structures of endonuclease v with dna reveal initiation of2 deaminated adenine repair
73d1j6ua1
not modelled 48.0 12
Fold:MurCD N-terminal domain
Superfamily:MurCD N-terminal domain
Family:MurCD N-terminal domain
74c4gudA_
not modelled 45.8 21
PDB header:transferase
Chain: A: PDB Molecule:imidazole glycerol phosphate synthase subunit hish;
PDBTitle: crystal structure of amidotransferase hish from vibrio cholerae
75c3uugB_
not modelled 45.7 20
PDB header:sugar binding protein
Chain: B: PDB Molecule:multiple sugar-binding periplasmic receptor chve;
PDBTitle: crystal structure of the periplasmic sugar binding protein chve
76c6bwsA_
not modelled 45.5 36
PDB header:unknown function
Chain: A: PDB Molecule:glycolate utilization protein;
PDBTitle: crystal structure of efga from methylobacterium extorquens
77c4zhtB_
not modelled 45.0 22
PDB header:isomerase
Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n-
PDBTitle: crystal structure of udp-glcnac 2-epimerase
78d2jfga1
not modelled 44.7 20
Fold:MurCD N-terminal domain
Superfamily:MurCD N-terminal domain
Family:MurCD N-terminal domain
79c3g68A_
not modelled 44.2 18
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (cd3275) from2 clostridium difficile 630 at 1.80 a resolution
80c5xvnL_
not modelled 43.8 15
PDB header:immune system
Chain: L: PDB Molecule:crispr-associated endonuclease cas1;
PDBTitle: e. far cas1-cas2/prespacer binary complex
81c3glmD_
not modelled 43.0 32
PDB header:lyase
Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a;
PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium symbiosum co-2 crystallized with crotonyl-coa
82c2xhzC_
not modelled 42.4 16
PDB header:isomerase
Chain: C: PDB Molecule:arabinose 5-phosphate isomerase;
PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography
83c5ingC_
not modelled 42.2 15
PDB header:transferase
Chain: C: PDB Molecule:putative carboxyl transferase;
PDBTitle: a crotonyl-coa reductase-carboxylase independent pathway for assembly2 of unusual alkylmalonyl-coa polyketide synthase extender unit
84d1o6ca_
not modelled 41.7 23
Fold:UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase
Family:UDP-N-acetylglucosamine 2-epimerase
85c5nmwA_
not modelled 41.7 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavin-containing monooxygenase;
PDBTitle: crystal structure of the pyrrolizidine alkaloid n-oxygenase from2 zonocerus variegatus in complex with fad
86d1tjya_
not modelled 41.2 16
Fold:Periplasmic binding protein-like I
Superfamily:Periplasmic binding protein-like I
Family:L-arabinose binding protein-like
87c4pz0A_
not modelled 40.7 18
PDB header:sugar binding protein
Chain: A: PDB Molecule:sugar abc transporter, sugar-binding protein;
PDBTitle: the crystal structure of a solute binding protein from bacillus2 anthracis str. ames in complex with quorum-sensing signal3 autoinducer-2 (ai-2)
88c1vrgE_
not modelled 40.1 18
PDB header:ligase
Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit;
PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution
89c3qk7C_
not modelled 39.7 18
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulators;
PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001
90c5vj1M_
not modelled 39.6 24
PDB header:transferase
Chain: M: PDB Molecule:mdce;
PDBTitle: crystal structure of a pseudomonas malonate decarboxylase hetero-2 tetramer in complex with coenzyme a
91d1p3da1
not modelled 39.5 25
Fold:MurCD N-terminal domain
Superfamily:MurCD N-terminal domain
Family:MurCD N-terminal domain
92c5braA_
not modelled 39.2 19
PDB header:solute-binding protein
Chain: A: PDB Molecule:putative periplasmic binding protein with substrate ribose;
PDBTitle: crystal structure of a putative periplasmic solute binding protein2 (ipr025997) from ochrobactrum anthropi atcc49188 (oant_2843, target3 efi-511085)
93c4yleA_
not modelled 39.1 12
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator;
PDBTitle: crystal structure of an abc transpoter solute binding protein2 (ipr025997) from burkholderia multivorans (bmul_1631, target efi-3 511115) with an unknown ligand modelled as alpha-d-erythrofuranose
94c5iklD_
not modelled 38.5 11
PDB header:ligase
Chain: D: PDB Molecule:geranyl-coa carboxylase, beta-subunit;
PDBTitle: crystal structure of p. aeruginosa geranyl-coa carboxylase (gcc), beta2 subunit
95c3fpvC_
not modelled 38.4 36
PDB header:heme binding protein
Chain: C: PDB Molecule:extracellular haem-binding protein;
PDBTitle: crystal structure of hbps
96d2gv8a2
not modelled 38.2 26
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD/NAD-linked reductases, N-terminal and central domains
97c3s2uA_
not modelled 37.8 22
PDB header:transferase
Chain: A: PDB Molecule:udp-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide)
PDBTitle: crystal structure of the pseudomonas aeruginosa murg:udp-glcnac2 substrate complex
98d1euca1
not modelled 37.6 17
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
99c2nrzB_
not modelled 37.6 20
PDB header:hydrolase
Chain: B: PDB Molecule:uvrabc system protein c;
PDBTitle: crystal structure of the c-terminal half of uvrc bound to its2 catalytic divalent cation
100c4q0gC_
not modelled 37.2 16
PDB header:ligase
Chain: C: PDB Molecule:probable acetyl-/propionyl-coa carboxylase (beta subunit)
PDBTitle: crystal structure of beta subunit of acyl-coa carboxylase accd1 from2 mycobacterium tuberculosis
101c4l6wB_
not modelled 36.6 26
PDB header:ligase
Chain: B: PDB Molecule:probable propionyl-coa carboxylase beta chain 6;
PDBTitle: carboxyltransferase subunit (accd6) of mycobacterium tuberculosis2 acetyl-coa carboxylase
102d1xnya1
not modelled 36.5 39
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
103d1on3a1
not modelled 36.5 22
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
104c1s3mA_
not modelled 36.2 16
PDB header:phosphodiesterase
Chain: A: PDB Molecule:hypothetical protein mj0936;
PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase
105d1s3la_
not modelled 36.2 16
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:YfcE-like
106d2a7sa2
not modelled 36.1 22
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
107d1a9xa4
not modelled 36.0 27
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
108c1x0uB_
not modelled 35.8 25
PDB header:lyase
Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit;
PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii
109c5gj3A_
not modelled 35.7 15
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic binding protein;
PDBTitle: periplasmic heme-binding protein rhut from roseiflexus sp. rs-1 in2 two-heme bound form (holo-2)
110c2a7sD_
not modelled 35.5 18
PDB header:ligase
Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5;
PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis
111c1on3E_
not modelled 35.3 15
PDB header:transferase
Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s
PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound)
112c5e9tA_
not modelled 35.0 30
PDB header:transferase/chaperone
Chain: A: PDB Molecule:glycosyltransferase gtf1;
PDBTitle: crystal structure of gtfa/b complex
113c3u9rB_
not modelled 34.9 21
PDB header:ligase
Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit
114d1xnya2
not modelled 34.3 22
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
115c3bblA_
not modelled 33.8 8
PDB header:regulatory protein
Chain: A: PDB Molecule:regulatory protein of laci family;
PDBTitle: crystal structure of a regulatory protein of laci family from2 chloroflexus aggregans
116c1keeH_
not modelled 33.7 27
PDB header:ligase
Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain;
PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
117d1vrga1
not modelled 33.5 50
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
118c4kzkA_
not modelled 33.2 17
PDB header:sugar binding protein
Chain: A: PDB Molecule:l-arabinose abc transporter, periplasmic l-arabinose-
PDBTitle: the structure of the periplasmic l-arabinose binding protein from2 burkholderia thailandensis
119d1vrga2
not modelled 33.2 22
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain
120d2a7sa1
not modelled 33.0 39
Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Biotin dependent carboxylase carboxyltransferase domain

Binding site prediction 

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