1 c2pt7G_
97.5
16
PDB header: hydrolase/protein bindingChain: G: PDB Molecule: hypothetical protein;
PDBTitle: crystal structure of cag virb11 (hp0525) and an inhibitory protein2 (hp1451)
2 c3gkuB_
97.4
21
PDB header: rna binding proteinChain: B: PDB Molecule: probable rna-binding protein;
PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940
3 c2cy1A_
97.3
21
PDB header: transcriptionChain: A: PDB Molecule: nusa protein homolog;
PDBTitle: crystal structure of ape1850
4 c2jzxA_
96.2
23
PDB header: rna binding proteinChain: A: PDB Molecule: poly(rc)-binding protein 2;
PDBTitle: pcbp2 kh1-kh2 domains
5 c2hh2A_
96.1
31
PDB header: rna binding proteinChain: A: PDB Molecule: kh-type splicing regulatory protein;
PDBTitle: solution structure of the fourth kh domain of ksrp
6 d1x4ma1
96.0
28
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
7 d1wh9a_
95.8
15
Fold: Alpha-lytic protease prodomain-likeSuperfamily: Prokaryotic type KH domain (KH-domain type II)Family: Prokaryotic type KH domain (KH-domain type II)
8 c2anrA_
95.8
26
PDB header: rna-binding protein/rnaChain: A: PDB Molecule: neuro-oncological ventral antigen 1;
PDBTitle: crystal structure (ii) of nova-1 kh1/kh2 domain tandem with 25nt rna2 hairpin
9 d2axya1
95.7
25
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
10 d1j4wa2
95.6
26
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
11 d1we8a_
95.6
26
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
12 c1ztgD_
95.5
25
PDB header: dna, rna binding protein/dnaChain: D: PDB Molecule: poly(rc)-binding protein 1;
PDBTitle: human alpha polyc binding protein kh1
13 d1wvna1
95.5
29
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
14 d1j4wa1
95.5
23
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
15 c2jvzA_
95.4
34
PDB header: splicingChain: A: PDB Molecule: far upstream element-binding protein 2;
PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp
16 d1khma_
95.4
25
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
17 c2qndA_
95.3
27
PDB header: rna binding proteinChain: A: PDB Molecule: fmr1 protein;
PDBTitle: crystal structure of the kh1-kh2 domains from human fragile x mental2 retardation protein
18 d1ec6a_
95.3
30
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
19 d1zzka1
95.2
29
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
20 c2hh3A_
95.0
31
PDB header: rna binding proteinChain: A: PDB Molecule: kh-type splicing regulatory protein;
PDBTitle: solution structure of the third kh domain of ksrp
21 c4b8tA_
not modelled
94.8
31
PDB header: transcription/rnaChain: A: PDB Molecule: kh-type splicing regulatory protein;
PDBTitle: rna binding protein solution structure of the third kh2 domain of ksrp in complex with the g-rich target sequence.
22 d1x4na1
not modelled
94.8
30
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
23 d2asba3
not modelled
94.7
22
Fold: Alpha-lytic protease prodomain-likeSuperfamily: Prokaryotic type KH domain (KH-domain type II)Family: Prokaryotic type KH domain (KH-domain type II)
24 d1viga_
not modelled
94.7
19
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
25 d2ba0a3
not modelled
94.7
27
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
26 d1dtja_
not modelled
94.7
29
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
27 d1tuaa1
not modelled
94.6
35
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
28 c1j4wA_
not modelled
94.6
23
PDB header: transcription/dnaChain: A: PDB Molecule: fuse binding protein;
PDBTitle: complex of the kh3 and kh4 domains of fbp with a2 single_stranded 29mer dna oligonucleotide from the fuse3 element of the c-myc oncogene
29 d1hh2p3
not modelled
94.6
27
Fold: Alpha-lytic protease prodomain-likeSuperfamily: Prokaryotic type KH domain (KH-domain type II)Family: Prokaryotic type KH domain (KH-domain type II)
30 c2dgrA_
not modelled
94.5
28
PDB header: rna binding proteinChain: A: PDB Molecule: ring finger and kh domain-containing protein 1;
PDBTitle: solution structure of the second kh domain in ring finger2 and kh domain containing protein 1
31 d2qalc1
not modelled
94.5
22
Fold: Alpha-lytic protease prodomain-likeSuperfamily: Prokaryotic type KH domain (KH-domain type II)Family: Prokaryotic type KH domain (KH-domain type II)
32 c2n8lA_
not modelled
94.4
26
PDB header: rna binding protein/rnaChain: A: PDB Molecule: insulin-like growth factor 2 mrna-binding protein 1;
PDBTitle: zipcode-binding-protein-1 kh3kh4(dd) domains in complex with the kh32 rna target
33 d2z0sa2
not modelled
94.4
27
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
34 c3krmB_
not modelled
94.4
25
PDB header: rna binding proteinChain: B: PDB Molecule: insulin-like growth factor 2 mrna-binding protein 1;
PDBTitle: imp1 kh34
35 d1dt4a_
not modelled
94.2
29
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
36 d2ctla1
not modelled
94.1
37
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
37 d2ctma1
not modelled
94.0
13
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
38 d2ctea1
not modelled
94.0
20
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
39 c6qeyA_
not modelled
93.9
19
PDB header: rna binding proteinChain: A: PDB Molecule: insulin-like growth factor 2 mrna-binding protein 1;
PDBTitle: imp1 kh1 and kh2 domains create a structural platform with unique rna2 recognition and re-modelling properties
40 d2ctka1
not modelled
93.5
32
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
41 c3n89B_
not modelled
93.5
6
PDB header: cell cycleChain: B: PDB Molecule: defective in germ line development protein 3, isoform a;
PDBTitle: kh domains
42 c5wwwA_
not modelled
93.3
29
PDB header: rna binding protein/rnaChain: A: PDB Molecule: rna-binding e3 ubiquitin-protein ligase mex3c;
PDBTitle: crystal structure of the kh1 domain of human rna-binding e3 ubiquitin-2 protein ligase mex-3c complex with rna
43 d2ctja1
not modelled
93.3
23
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
44 c6emlp_
not modelled
92.8
23
PDB header: ribosomeChain: P: PDB Molecule: 40s ribosomal protein s0-a;
PDBTitle: cryo-em structure of a late pre-40s ribosomal subunit from2 saccharomyces cerevisiae
45 c3zeyX_
not modelled
92.8
14
PDB header: ribosomeChain: X: PDB Molecule: 40s ribosomal protein s3, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
46 d2ctfa1
not modelled
92.7
13
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
47 d1tuaa2
not modelled
92.7
33
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
48 c1tuaA_
not modelled
92.6
35
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein ape0754;
PDBTitle: 1.5 a crystal structure of a protein of unknown function2 ape0754 from aeropyrum pernix
49 c2asbA_
not modelled
92.3
22
PDB header: transcription/rnaChain: A: PDB Molecule: transcription elongation protein nusa;
PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex
50 c6qh2A_
not modelled
92.1
33
PDB header: signaling proteinChain: A: PDB Molecule: polyribonucleotide nucleotidyltransferase;
PDBTitle: solution nmr ensemble for a chimeric kh-s1 domain construct of2 exosomal polynucleotide phosphrylase at 298k compiled using the3 comand method
51 c2xznC_
not modelled
91.4
11
PDB header: ribosomeChain: C: PDB Molecule: kh domain containing protein;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
52 d2uubc1
not modelled
91.3
29
Fold: Alpha-lytic protease prodomain-likeSuperfamily: Prokaryotic type KH domain (KH-domain type II)Family: Prokaryotic type KH domain (KH-domain type II)
53 d2fmra_
not modelled
91.1
27
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
54 c1hh2P_
not modelled
89.8
27
PDB header: transcription regulationChain: P: PDB Molecule: n utilization substance protein a;
PDBTitle: crystal structure of nusa from thermotoga maritima
55 c1k0rB_
not modelled
89.7
22
PDB header: transcriptionChain: B: PDB Molecule: nusa;
PDBTitle: crystal structure of mycobacterium tuberculosis nusa
56 d1egaa2
not modelled
89.6
13
Fold: Alpha-lytic protease prodomain-likeSuperfamily: Prokaryotic type KH domain (KH-domain type II)Family: Prokaryotic type KH domain (KH-domain type II)
57 c2zkqc_
not modelled
89.3
10
PDB header: ribosomal protein/rnaChain: C: PDB Molecule: rna expansion segment es4;
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
58 c6g18x_
not modelled
88.9
28
PDB header: ribosomeChain: X: PDB Molecule: 40s ribosomal protein s23;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state c
59 c2e3uA_
not modelled
87.8
24
PDB header: rna binding proteinChain: A: PDB Molecule: hypothetical protein ph1566;
PDBTitle: crystal structure analysis of dim2p from pyrococcus horikoshii ot3
60 c5xyiD_
not modelled
87.6
5
PDB header: ribosomeChain: D: PDB Molecule: ribosomal protein s3, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
61 c1l2fA_
not modelled
87.5
27
PDB header: transcriptionChain: A: PDB Molecule: n utilization substance protein a;
PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain
62 c4nbqB_
not modelled
86.9
27
PDB header: transferaseChain: B: PDB Molecule: polyribonucleotide nucleotidyltransferase;
PDBTitle: structure of the polynucleotide phosphorylase (cbu_0852) from coxiella2 burnetii
63 c4am3A_
not modelled
86.0
23
PDB header: transferase/rnaChain: A: PDB Molecule: polyribonucleotide nucleotidyltransferase;
PDBTitle: crystal structure of c. crescentus pnpase bound to rna
64 c1wf3A_
not modelled
84.9
24
PDB header: hydrolaseChain: A: PDB Molecule: gtp-binding protein;
PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8
65 d2cpqa1
not modelled
84.5
31
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
66 c4aimA_
not modelled
84.0
23
PDB header: transferase/peptideChain: A: PDB Molecule: polyribonucleotide nucleotidyltransferase;
PDBTitle: crystal structure of c. crescentus pnpase bound to rnase e2 recognition peptide
67 c3u1kB_
not modelled
83.9
27
PDB header: transferaseChain: B: PDB Molecule: polyribonucleotide nucleotidyltransferase 1, mitochondrial;
PDBTitle: crystal structure of human pnpase
68 c3j20C_
not modelled
82.9
20
PDB header: ribosomeChain: C: PDB Molecule: 30s ribosomal protein s3p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
69 c6flqF_
not modelled
82.3
21
PDB header: transcriptionChain: F: PDB Molecule: transcription termination/antitermination protein nusa;
PDBTitle: cryoem structure of e.coli rna polymerase paused elongation complex2 bound to nusa
70 c1s1hC_
not modelled
81.9
14
PDB header: ribosomeChain: C: PDB Molecule: 40s ribosomal protein s3;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s4 ribosomal subunit is in file 1s1i.
71 d1wf3a2
not modelled
78.1
21
Fold: Alpha-lytic protease prodomain-likeSuperfamily: Prokaryotic type KH domain (KH-domain type II)Family: Prokaryotic type KH domain (KH-domain type II)
72 d2je6i3
not modelled
77.3
23
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
73 c3ievA_
not modelled
75.1
19
PDB header: nucleotide binding protein/rnaChain: A: PDB Molecule: gtp-binding protein era;
PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna
74 c4mtnA_
not modelled
73.5
23
PDB header: transcription regulatorChain: A: PDB Molecule: transcription termination factor nusa;
PDBTitle: crystal structure of transcription termination factor nusa from2 planctomyces limnophilus dsm 3776
75 c4qmfB_
not modelled
70.9
33
PDB header: rna binding proteinChain: B: PDB Molecule: krr1 small subunit processome component;
PDBTitle: structure of the krr1 and faf1 complex from saccharomyces cerevisiae
76 c1egaB_
not modelled
64.8
13
PDB header: hydrolaseChain: B: PDB Molecule: protein (gtp-binding protein era);
PDBTitle: crystal structure of a widely conserved gtpase era
77 c3izbB_
not modelled
63.9
20
PDB header: ribosomeChain: B: PDB Molecule: 40s ribosomal protein rps3 (s3p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
78 c2yqrA_
not modelled
61.2
24
PDB header: rna binding proteinChain: A: PDB Molecule: kiaa0907 protein;
PDBTitle: solution structure of the kh domain in kiaa0907 protein
79 c5lm7A_
not modelled
60.9
17
PDB header: transcriptionChain: A: PDB Molecule: transcription termination/antitermination protein nusa;
PDBTitle: crystal structure of the lambda n-nus factor complex
80 c5o5jC_
not modelled
55.4
21
PDB header: ribosomeChain: C: PDB Molecule: 30s ribosomal protein s3;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
81 c4jvyA_
not modelled
46.4
31
PDB header: rna binding proteinChain: A: PDB Molecule: female germline-specific tumor suppressor gld-1;
PDBTitle: structure of the star (signal transduction and activation of rna)2 domain of gld-1 bound to rna
82 c1pnxC_
not modelled
45.5
28
PDB header: ribosomeChain: C: PDB Molecule: 30s ribosomal protein s3;
PDBTitle: crystal structure of the wild type ribosome from e. coli, 30s subunit2 of 70s ribosome. this file, 1pnx, contains only molecules of the 30s3 ribosomal subunit. the 50s subunit is in the pdb file 1pny.
83 d1k1ga_
not modelled
40.7
25
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
84 c3j00C_
not modelled
40.2
20
PDB header: ribosome/ribosomal proteinChain: C: PDB Molecule: 30s ribosomal protein s3;
PDBTitle: structure of the ribosome-secye complex in the membrane environment
85 c5eltB_
not modelled
32.2
21
PDB header: rna binding proteinChain: B: PDB Molecule: kh domain-containing, rna-binding, signal transduction-
PDBTitle: structure of the qua1-kh domain of t-star in complex with uaau rna
86 c4pfsA_
not modelled
31.3
32
PDB header: ligaseChain: A: PDB Molecule: cobyrinic acid a,c-diamide synthase;
PDBTitle: crystal structure of cobyrinic acid a,c-diamide synthase from2 mycobacterium smegmatis
87 c5el3D_
not modelled
31.1
21
PDB header: rna binding proteinChain: D: PDB Molecule: kh domain-containing, rna-binding, signal transduction-
PDBTitle: structure of the kh domain of t-star
88 c4walA_
not modelled
28.1
29
PDB header: protein binding/rnaChain: A: PDB Molecule: branchpoint-bridging protein;
PDBTitle: crystal structure of selenomethionine msl5 protein in complex with rna2 at 2.2 a
89 c2qbfC_
not modelled
26.0
21
PDB header: ribosomeChain: C: PDB Molecule: 30s ribosomal protein s3;
PDBTitle: crystal structure of the bacterial ribosome from escherichia coli in2 complex with ribosome recycling factor (rrf). this file contains the3 30s subunit of the second 70s ribosome. the entire crystal structure4 contains two 70s ribosomes and is described in remark 400.
90 c4jvhA_
not modelled
22.5
35
PDB header: rna binding proteinChain: A: PDB Molecule: protein quaking;
PDBTitle: structure of the star domain of quaking protein in complex with rna
91 d1wzla1
not modelled
18.4
15
Fold: Immunoglobulin-like beta-sandwichSuperfamily: E set domainsFamily: E-set domains of sugar-utilizing enzymes
92 c2gy9C_
not modelled
16.2
29
PDB header: ribosomeChain: C: PDB Molecule: 30s ribosomal subunit protein s3;
PDBTitle: structure of the 30s subunit of a pre-translocational e. coli ribosome2 obtained by fitting atomic models for rna and protein components into3 cryo-em map emd-1056
93 d2bl5a1
not modelled
14.9
35
Fold: Eukaryotic type KH-domain (KH-domain type I)Superfamily: Eukaryotic type KH-domain (KH-domain type I)Family: Eukaryotic type KH-domain (KH-domain type I)
94 d1j0ha1
not modelled
13.3
15
Fold: Immunoglobulin-like beta-sandwichSuperfamily: E set domainsFamily: E-set domains of sugar-utilizing enzymes
95 c2kxoA_
not modelled
12.5
14
PDB header: cell cycleChain: A: PDB Molecule: cell division topological specificity factor;
PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae
96 c1hnwC_
not modelled
12.5
34
PDB header: ribosomeChain: C: PDB Molecule: 30s ribosomal protein s3;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit2 in complex with tetracycline
97 c2lvlA_
not modelled
12.1
30
PDB header: lantibiotic-binding-proteinChain: A: PDB Molecule: spai;
PDBTitle: nmr structure the lantibiotic immunity protein spai
98 c3tekA_
not modelled
11.6
13
PDB header: dna binding proteinChain: A: PDB Molecule: thermodbp-single stranded dna binding protein;
PDBTitle: thermodbp: a non-canonical single-stranded dna binding protein with a2 novel structure and mechanism
99 d2z0sa1
not modelled
11.0
14
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: Cold shock DNA-binding domain-like