1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		V	Y	R	V	F	E	A	L	D	E	L	S	A	I	V	E	E	A	R	G	V	P	M	T	A	G	C	V	V	P	R	G	D	V	L	E	L	I	D	D	I	K	D	A	I	P	G	E	L	D	D	A	Q	D	V	L	D	A	R	D
Secondary structure
SS confidence
Disorder		?	?	?																?		?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		S	M	L	Q	D	A	K	T	H	A	D	S	M	V	S	S	A	T	T	E	A	E	S	I	L	N	H	A	R	T	E	A	D	R	I	L	S	D	A	K	A	Q	A	D	R	M	V	S	E	A	R	Q	H	S	E	R	M	V	A	D
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		A	R	E	E	A	I	R	I	A	T	A	A	K	R	E	Y	E	A	S	V	S	R	A	Q	A	E	C	D	R	L	I	E	N	G	N	I	S	Y	E	K	A	V	Q	E	G	I	K	E	Q	Q	R	L	V	S	Q	N	E	V	V	A
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		A	A	N	A	E	S	T	R	L	V	D	T	A	H	A	E	A	D	R	L	R	G	E	C	D	I	Y	V	D	N	K	L	A	E	F	E	E	F	L	N	G	T	L	R	S	V	G	R	G	R	H	Q	L	R	T	A	A	G	T	H
Secondary structure
SS confidence
Disorder																																																								?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.
Sequence		D	Y	A	V	R
Secondary structure
SS confidence
Disorder		?	?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 8%) Alpha helix ( 93%) Beta strand ( 0%)

Rank Aligned region

PDB 6fki chain P Region: 32 - 140 Aligned: 109 Modelled: 109 Confidence: 83.0% Identity: 12% PDB header:membrane protein Chain: P: PDB Molecule:atp synthase subunit c, chloroplastic; PDBTitle: chloroplast f1fo conformation 3 Phyre2 PDB 5uyo chain A Region: 2 - 45 Aligned: 44 Modelled: 43 Confidence: 77.0% Identity: 11% PDB header:de novo protein Chain: A: PDB Molecule:heeh_rd4_0097; PDBTitle: solution nmr structure of the de novo mini protein heeh_rd4_0097 Phyre2 PDB 6fki chain B Region: 33 - 132 Aligned: 100 Modelled: 100 Confidence: 71.2% Identity: 9% PDB header:membrane protein Chain: B: PDB Molecule:atp synthase subunit beta, chloroplastic; PDBTitle: chloroplast f1fo conformation 3 Phyre2 PDB 2a01 chain B Region: 1 - 228 Aligned: 222 Modelled: 228 Confidence: 55.4% Identity: 12% PDB header:lipid transport Chain: B: PDB Molecule:apolipoprotein a-i; PDBTitle: crystal structure of lipid-free human apolipoprotein a-i Phyre2 PDB 6nrc chain 6 Region: 7 - 76 Aligned: 70 Modelled: 70 Confidence: 54.5% Identity: 11% PDB header:chaperone Chain: 6: PDB Molecule:prefoldin subunit 6; PDBTitle: htric-hpfd class3 Phyre2 PDB 3s84 chain B Region: 31 - 240 Aligned: 210 Modelled: 210 Confidence: 52.9% Identity: 10% PDB header:transport protein Chain: B: PDB Molecule:apolipoprotein a-iv; PDBTitle: dimeric apoa-iv Phyre2 PDB 2kk7 chain A Region: 59 - 94 Aligned: 36 Modelled: 36 Confidence: 50.2% Identity: 36% PDB header:hydrolase Chain: A: PDB Molecule:v-type atp synthase subunit e; PDBTitle: nmr solution structure of the n terminal domain of subunit e2 (e1-52) of a1ao atp synthase from methanocaldococcus3 jannaschii Phyre2 PDB 3r2p chain A Region: 38 - 222 Aligned: 174 Modelled: 185 Confidence: 45.9% Identity: 11% PDB header:lipid transport Chain: A: PDB Molecule:apolipoprotein a-i; PDBTitle: 2.2 angstrom crystal structure of c terminal truncated human2 apolipoprotein a-i reveals the assembly of hdl by dimerization. Phyre2 PDB 1l2p chain A Region: 61 - 125 Aligned: 58 Modelled: 65 Confidence: 34.9% Identity: 28% Fold: Single transmembrane helix Superfamily: F1F0 ATP synthase subunit B, membrane domain Family: F1F0 ATP synthase subunit B, membrane domain Phyre2 PDB 5t4o chain J Region: 32 - 138 Aligned: 107 Modelled: 107 Confidence: 34.5% Identity: 16% PDB header:hydrolase Chain: J: PDB Molecule:atp synthase subunit b; PDBTitle: autoinhibited e. coli atp synthase state 1 Phyre2 PDB 1y4c chain A Region: 70 - 195 Aligned: 124 Modelled: 126 Confidence: 30.0% Identity: 12% PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp Phyre2 PDB 3iuo chain A Region: 3 - 56 Aligned: 54 Modelled: 50 Confidence: 27.6% Identity: 19% PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent dna helicase recq; PDBTitle: the crystal structure of the c-terminal domain of the atp-dependent2 dna helicase recq from porphyromonas gingivalis to 1.6a Phyre2 PDB 1av1 chain B Region: 74 - 245 Aligned: 166 Modelled: 172 Confidence: 18.6% Identity: 13% PDB header:lipid transport Chain: B: PDB Molecule:apolipoprotein a-i; PDBTitle: crystal structure of human apolipoprotein a-i Phyre2 PDB 5t58 chain B Region: 3 - 84 Aligned: 82 Modelled: 82 Confidence: 17.0% Identity: 16% PDB header:cell cycle Chain: B: PDB Molecule:klla0e05809p; PDBTitle: structure of the mind complex shows a regulatory focus of yeast2 kinetochore assembly Phyre2 PDB 5wwl chain N Region: 3 - 94 Aligned: 86 Modelled: 92 Confidence: 16.4% Identity: 9% PDB header:cell cycle Chain: N: PDB Molecule:kinetochore protein nnf1; PDBTitle: crystal structure of the schizogenesis pombe kinetochore mis12c2 subcomplex Phyre2 PDB 5ic9 chain C Region: 2 - 57 Aligned: 56 Modelled: 56 Confidence: 13.7% Identity: 14% PDB header:structural protein Chain: C: PDB Molecule:putative uncharacterized protein; PDBTitle: structure of the ctd complex of utp12 and utp13 Phyre2 PDB 6nr9 chain 2 Region: 7 - 67 Aligned: 61 Modelled: 61 Confidence: 12.9% Identity: 23% PDB header:chaperone Chain: 2: PDB Molecule:prefoldin subunit 2; PDBTitle: htric-hpfd class5 Phyre2 PDB 2y44 chain A Region: 34 - 200 Aligned: 166 Modelled: 167 Confidence: 10.1% Identity: 16% PDB header:membrane protein Chain: A: PDB Molecule:glutamic acid/alanine-rich protein; PDBTitle: crystal structure of garp from trypanosoma congolense Phyre2 PDB 6nr8 chain 4 Region: 3 - 72 Aligned: 70 Modelled: 70 Confidence: 10.0% Identity: 14% PDB header:chaperone Chain: 4: PDB Molecule:prefoldin subunit 4; PDBTitle: htric-hpfd class6 Phyre2 PDB 5an5 chain J Region: 2 - 19 Aligned: 18 Modelled: 18 Confidence: 9.4% Identity: 17% PDB header:cell cycle Chain: J: PDB Molecule:cell cycle protein gpsb; PDBTitle: b. subtilis gpsb c-terminal domain Phyre2 1 c6fkip_ 2 c5uyoA_ 3 c6fkib_ 4 c2a01B_ 5 c6nrc6_ 6 c3s84B_ 7 c2kk7A_ 8 c3r2pA_ 9 d1l2pa_ 10 c5t4oJ_ 11 c1y4cA_ 12 c3iuoA_ 13 c1av1B_ 14 c5t58B_ 15 c5wwlN_ 16 c5ic9C_ 17 c6nr92_ 18 c2y44A_ 19 c6nr84_ 20 c5an5J_ 21 22 23 24 25 26 27