Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2960c_(-)_3312963_3313211
DateThu Aug 8 16:20:12 BST 2019
Unique Job ID79abd7d2868ae42a
SequenceVGRNATAVVS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:20.624 Y:17.683 Z:13.749
Model (left) based on template d1uwva2
Top template information
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:(Uracil-5-)-methyltransferase
Confidence and coverage
Confidence: 19.6% Coverage: 17%
14 residues ( 17% of your sequence) have been modelled with 19.6% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1uwva2



19.6 50
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:(Uracil-5-)-methyltransferase
2c5xs1A_



19.4 24
PDB header:hormone
Chain: A: PDB Molecule:hyperglycemic hormone-like peptide;
PDBTitle: solution structure of crustacean hyperglycemic hormone-like (chh-l)2 from the scylla olivacea
3c5b5iB_



16.7 48
PDB header:hormone
Chain: B: PDB Molecule:crustacean hyperglycemic hormones 1;
PDBTitle: the crystal structure of a crustacean hyperglycemic hormone precursor2 from the kuruma prawn
4c5x3lA_



12.5 56
PDB header:antimicrobial protein
Chain: A: PDB Molecule:pilosulin-1;
PDBTitle: solution structure of a novel antimicrobial peptide, p1, from jumper2 ant myrmecia pilosula
5c1vbkA_



11.7 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph1313;
PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3
6c2xfyA_



10.9 44
PDB header:hydrolase
Chain: A: PDB Molecule:beta-amylase;
PDBTitle: crystal structure of barley beta-amylase complexed with alpha-2 cyclodextrin
7d1wdpa1



10.5 44
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
8d1fa2a_



10.1 44
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
9d3b7sa1



9.9 38
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:Leukotriene A4 hydrolase C-terminal domain
10c4v1af_



9.8 83
PDB header:ribosome
Chain: F: PDB Molecule:
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 22 of 2
11d2dloa1



9.1 67
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
12c5xj2C_



8.9 14
PDB header:transferase/rna
Chain: C: PDB Molecule:uncharacterized rna methyltransferase sp_1029;
PDBTitle: structure of sprlmcd with u747 rna
13c2yurA_



8.9 25
PDB header:protein binding
Chain: A: PDB Molecule:retinoblastoma-binding protein 6;
PDBTitle: solution structure of the ring finger of human2 retinoblastoma-binding protein 6
14d1b1ya_



8.6 47
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
15c4hrvB_



8.1 23
PDB header:lipid binding protein
Chain: B: PDB Molecule:putative lipoprotein gna1162;
PDBTitle: crystal structure of lipoprotein gna1162 from neisseria meningitidis
16c5j9hA_



7.8 24
PDB header:viral protein
Chain: A: PDB Molecule:envelopment polyprotein;
PDBTitle: crystal structure of glycoprotein c from puumala virus in the post-2 fusion conformation (ph 8.0)
17c1uwvA_



7.3 50
PDB header:transferase
Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma;
PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase
18c5ooma_



7.2 71
PDB header:ribosome
Chain: A: PDB Molecule:16s ribosomal rna;
PDBTitle: structure of a native assembly intermediate of the human mitochondrial2 ribosome with unfolded interfacial rrna
19d1xmta_



6.5 18
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
20c5ljyA_



6.5 33
PDB header:viral protein
Chain: A: PDB Molecule:envelopment polyprotein;
PDBTitle: structure of hantavirus envelope glycoprotein gc in complex with scfv2 a5
21c4indR_



not modelled 5.9 60
PDB header:viral protein
Chain: R: PDB Molecule:c381 turret protein;
PDBTitle: the triple jelly roll fold and turret assembly in an archaeal virus
22c5y7lA_



not modelled 5.8 50
PDB header:metal binding protein
Chain: A: PDB Molecule:calcium-activated potassium channel subunit beta-4;
PDBTitle: solution structure of hbeta4 extracellular loop of bk potassium2 channel
23d3blhb1



not modelled 5.6 21
Fold:Cyclin-like
Superfamily:Cyclin-like
Family:Cyclin
24c5lk1A_



not modelled 5.4 33
PDB header:viral protein
Chain: A: PDB Molecule:envelopment polyprotein;
PDBTitle: structure of hantavirus envelope glycoprotein gc in postfusion2 conformation in presence of 200 mm kcl
25d1sq4a_



not modelled 5.2 57
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:YlbA-like
26c2k2tA_



not modelled 5.2 47
PDB header:cell adhesion
Chain: A: PDB Molecule:micronemal protein 6;
PDBTitle: epidermal growth factor-like domain 2 from toxoplasma2 gondii microneme protein 6
27d2fp1a1



not modelled 5.1 29
Fold:Chorismate mutase II
Superfamily:Chorismate mutase II
Family:Secreted chorismate mutase-like
28c1j0tA_



not modelled 5.1 29
PDB header:hormone/growth factor
Chain: A: PDB Molecule:molt-inhibiting hormone;
PDBTitle: the solution structure of molt-inhibiting hormone from the2 kuruma prawn

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