Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2972c_(-)_3327033_3327746
DateThu Aug 8 16:20:13 BST 2019
Unique Job ID777423d939f00c40
SequenceMNRRTLLWLS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:31.862 Y:37.892 Z:38.887
Model (left) based on template c5vgbA_
Top template information
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:crispr-associated endonuclease cas9;
PDBTitle: crystal structure of nmecas9 hnh domain bound to anti-crispr acriic1
Confidence and coverage
Confidence: 99.0% Coverage: 32%
75 residues ( 32% of your sequence) have been modelled with 99.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5vgbA_



99.0 25
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:crispr-associated endonuclease cas9;
PDBTitle: crystal structure of nmecas9 hnh domain bound to anti-crispr acriic1
2c5axwA_



98.5 19
PDB header:hydrolase/rna/dna
Chain: A: PDB Molecule:crispr-associated endonuclease cas9;
PDBTitle: crystal structure of staphylococcus aureus cas9 in complex with sgrna2 and target dna (ttgggt pam)
3c4ogeA_



97.8 40
PDB header:hydrolase
Chain: A: PDB Molecule:hnh endonuclease domain protein;
PDBTitle: crystal structure of the type ii-c cas9 enzyme from actinomyces2 naeslundii
4c2qgpA_



97.5 22
PDB header:hydrolase
Chain: A: PDB Molecule:hnh endonuclease;
PDBTitle: x-ray structure of the nhn endonuclease from geobacter2 metallireducens. northeast structural genomics consortium target3 gmr87.
5c4cmqB_



96.8 30
PDB header:hydrolase
Chain: B: PDB Molecule:crispr-associated endonuclease cas9/csn1;
PDBTitle: crystal structure of mn-bound s.pyogenes cas9
6d1ouoa_



94.1 19
Fold:His-Me finger endonucleases
Superfamily:His-Me finger endonucleases
Family:Endonuclease I
7c5mkwA_



92.2 19
PDB header:hydrolase
Chain: A: PDB Molecule:dna annealing helicase and endonuclease zranb3;
PDBTitle: crystal structure of the human zranb3 hnh domain
8c5h0mA_



85.2 28
PDB header:hydrolase
Chain: A: PDB Molecule:hnh endonuclease;
PDBTitle: crystal structure of deep-sea thermophilic bacteriophage gve2 hnh2 endonuclease with zinc ion
9c5fhzF_



37.8 18
PDB header:oxidoreductase
Chain: F: PDB Molecule:aldehyde dehydrogenase family 1 member a3;
PDBTitle: human aldehyde dehydrogenase 1a3 complexed with nad(+) and retinoic2 acid
10d1jmxa1



28.6 13
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
11c2o2qA_



27.6 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:formyltetrahydrofolate dehydrogenase;
PDBTitle: crystal structure of the c-terminal domain of rat2 10'formyltetrahydrofolate dehydrogenase in complex with nadp
12c4qyjD_



27.5 20
PDB header:oxidoreductase
Chain: D: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: structure of phenylacetaldehyde dehydrogenase from pseudomonas putida2 s12
13c5b2oA_



26.4 50
PDB header:hydrolase/rna/dna
Chain: A: PDB Molecule:crispr-associated endonuclease cas9;
PDBTitle: crystal structure of francisella novicida cas9 in complex with sgrna2 and target dna (tgg pam)
14c2m76A_



24.0 32
PDB header:signaling protein
Chain: A: PDB Molecule:carnitine o-palmitoyltransferase 1, brain isoform;
PDBTitle: structure of the regulatory domain of human brain carnitine2 palmitoyltransferase 1
15d1pbya1



23.9 4
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
16c2hqhE_



23.4 64
PDB header:structural protein, protein binding
Chain: E: PDB Molecule:restin;
PDBTitle: crystal structure of p150glued and clip-170
17c3e2uF_



23.4 64
PDB header:protein binding
Chain: F: PDB Molecule:cap-gly domain-containing linker protein 1;
PDBTitle: crystal structure of the zink-knuckle 2 domain of human clip-170 in2 complex with cap-gly domain of human dynactin-1 (p150-glued)
18c3e2uE_



23.4 64
PDB header:protein binding
Chain: E: PDB Molecule:cap-gly domain-containing linker protein 1;
PDBTitle: crystal structure of the zink-knuckle 2 domain of human clip-170 in2 complex with cap-gly domain of human dynactin-1 (p150-glued)
19d1bxsa_



23.1 22
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
20c3vz0B_



22.5 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nad-dependent aldehyde dehydrogenase;
PDBTitle: structural insights into cofactor and substrate selection by gox0499
21c2hg2A_



not modelled 21.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase a;
PDBTitle: structure of lactaldehyde dehydrogenase
22c2mnjA_



not modelled 21.7 26
PDB header:protein binding
Chain: A: PDB Molecule:tpr repeat-containing protein associated with hsp90;
PDBTitle: nmr solution structure of the yeast pih1 and tah1 c-terminal domains2 complex
23c4o5hD_



not modelled 21.2 22
PDB header:oxidoreductase
Chain: D: PDB Molecule:phenylacetaldehyde dehydrogenase;
PDBTitle: x-ray crystal structure of a putative phenylacetaldehyde dehydrogenase2 from burkholderia cenocepacia
24c3b4wA_



not modelled 21.1 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: crystal structure of mycobacterium tuberculosis aldehyde dehydrogenase2 complexed with nad+
25c3e2uH_



not modelled 20.7 64
PDB header:protein binding
Chain: H: PDB Molecule:cap-gly domain-containing linker protein 1;
PDBTitle: crystal structure of the zink-knuckle 2 domain of human clip-170 in2 complex with cap-gly domain of human dynactin-1 (p150-glued)
26d1o9ja_



not modelled 20.4 18
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
27c4pxlB_



not modelled 20.3 33
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytosolic aldehyde dehydrogenase rf2c;
PDBTitle: structure of zm aldh2-3 (rf2c) in complex with nad
28c4lihG_



not modelled 19.9 16
PDB header:oxidoreductase
Chain: G: PDB Molecule:gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase;
PDBTitle: the crystal structure of gamma-glutamyl-gamma-aminobutyraldehyde2 dehydrogenase from burkholderia cenocepacia j2315
29c5mz5A_



not modelled 19.2 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldh21);
PDBTitle: crystal structure of aldehyde dehydrogenase 21 (aldh21) from2 physcomitrella patens in its apoform
30c5iuuA_



not modelled 18.2 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase family protein;
PDBTitle: crystal structure of indole-3-acetaldehyde dehydrogenase in apo form
31c3efvC_



not modelled 16.8 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative succinate-semialdehyde dehydrogenase;
PDBTitle: crystal structure of a putative succinate-semialdehyde dehydrogenase2 from salmonella typhimurium lt2 with bound nad
32c3rh9A_



not modelled 16.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase (nad(p)(+));
PDBTitle: the crystal structure of oxidoreductase from marinobacter aquaeolei
33c3r64A_



not modelled 15.5 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:nad dependent benzaldehyde dehydrogenase;
PDBTitle: crystal structure of a nad-dependent benzaldehyde dehydrogenase from2 corynebacterium glutamicum
34c4jz6A_



not modelled 15.5 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:salicylaldehyde dehydrogenase nahf;
PDBTitle: crystal structure of a salicylaldehyde dehydrogenase from pseudomonas2 putida g7 complexed with salicylaldehyde
35c5vbfH_



not modelled 14.7 16
PDB header:oxidoreductase
Chain: H: PDB Molecule:nad-dependent succinate-semialdehyde dehydrogenase;
PDBTitle: crystal structure of succinate semialdehyde dehydrogenase from2 burkholderia vietnamiensis
36c2ve5H_



not modelled 14.1 11
PDB header:oxidoreductase
Chain: H: PDB Molecule:betaine aldehyde dehydrogenase;
PDBTitle: crystallographic structure of betaine aldehyde2 dehydrogenase from pseudomonas aeruginosa
37d1pgl22



not modelled 14.0 22
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Comoviridae-like VP
38d2f2ha3



not modelled 13.9 9
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:Putative glucosidase YicI, domain 3
39c4h7nA_



not modelled 13.9 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: the structure of putative aldehyde dehydrogenase puta from anabaena2 variabilis.
40c5f7sA_



not modelled 13.8 26
PDB header:hydrolase
Chain: A: PDB Molecule:glycoside hydrolase family 31;
PDBTitle: cycloalternan-degrading enzyme from trueperella pyogenes
41c1xsiF_



not modelled 13.6 11
PDB header:hydrolase
Chain: F: PDB Molecule:putative family 31 glucosidase yici;
PDBTitle: structure of a family 31 alpha glycosidase
42d1ny722



not modelled 13.5 17
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Comoviridae-like VP
43c3ifgH_



not modelled 13.1 16
PDB header:oxidoreductase
Chain: H: PDB Molecule:succinate-semialdehyde dehydrogenase (nadp+);
PDBTitle: crystal structure of succinate-semialdehyde dehydrogenase from2 burkholderia pseudomallei, part 1 of 2
44d1wnda_



not modelled 13.0 16
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
45d2fnoa1



not modelled 12.7 23
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
46c3pqaA_



not modelled 12.7 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:lactaldehyde dehydrogenase;
PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase gapn2 from methanocaldococcus jannaschii dsm 2661
47c4pt3C_



not modelled 12.4 24
PDB header:oxidoreductase
Chain: C: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: nadph complex structure of aldehyde dehydrogenase from bacillus cereus
48c3rkoE_



not modelled 12.1 31
PDB header:oxidoreductase
Chain: E: PDB Molecule:nadh-quinone oxidoreductase subunit a;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
49c3rkoA_



not modelled 12.1 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh-quinone oxidoreductase subunit a;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
50c4go4E_



not modelled 12.1 16
PDB header:oxidoreductase
Chain: E: PDB Molecule:putative gamma-hydroxymuconic semialdehyde dehydrogenase;
PDBTitle: crystal structure of pnpe in complex with nicotinamide adenine2 dinucleotide
51c5u0mB_



not modelled 12.0 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:n-succinylglutamate 5-semialdehyde dehydrogenase;
PDBTitle: fatty aldehyde dehydrogenase from marinobacter aquaeolei vt8 and2 cofactor complex
52c5tjrE_



not modelled 11.7 13
PDB header:oxidoreductase
Chain: E: PDB Molecule:methylmalonate-semialdehyde dehydrogenase;
PDBTitle: x-ray crystal structure of a methylmalonate semialdehyde dehydrogenase2 from pseudomonas sp. aac
53c4dngB_



not modelled 11.4 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized aldehyde dehydrogenase aldy;
PDBTitle: crystal structure of putative aldehyde dehydrogenase from bacillus2 subtilis subsp. subtilis str. 168
54c3prlD_



not modelled 11.3 9
PDB header:oxidoreductase
Chain: D: PDB Molecule:nadp-dependent glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-phosphate2 dehydrogenase from bacillus halodurans c-125
55c4pxnB_



not modelled 11.2 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: structure of zm aldh7 in complex with nad
56c3vdoB_



not modelled 11.2 18
PDB header:dna binding protein/protein binding
Chain: B: PDB Molecule:anti-sigma-k factor rska;
PDBTitle: structure of extra-cytoplasmic function(ecf) sigma factor sigk in2 complex with its negative regulator rska from mycobacterium3 tuberculosis
57c3rosA_



not modelled 10.9 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:nad-dependent aldehyde dehydrogenase;
PDBTitle: crystal structure of nad-dependent aldehyde dehydrogenase from2 lactobacillus acidophilus
58c3ek1C_



not modelled 10.8 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: crystal structure of aldehyde dehydrogenase from brucella2 melitensis biovar abortus 2308
59c5j6bB_



not modelled 10.4 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: crystal structure of aldehyde dehydrogenase from burkholderia2 thailandensis in covelent complex with nadph
60c4e4gF_



not modelled 10.3 13
PDB header:oxidoreductase
Chain: F: PDB Molecule:methylmalonate-semialdehyde dehydrogenase;
PDBTitle: crystal structure of putative methylmalonate-semialdehyde2 dehydrogenase from sinorhizobium meliloti 1021
61c4itaA_



not modelled 10.2 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase;
PDBTitle: structure of bacterial enzyme in complex with cofactor
62c2w8qA_



not modelled 10.2 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase,
PDBTitle: the crystal structure of human ssadh in complex with ssa.
63d1w7ca3



not modelled 10.2 26
Fold:Cystatin-like
Superfamily:Amine oxidase N-terminal region
Family:Amine oxidase N-terminal region
64c5j4aA_



not modelled 9.6 25
PDB header:toxin
Chain: A: PDB Molecule:trna nuclease cdia;
PDBTitle: cdia-ct toxin from burkholderia pseudomallei e479 in complex with2 cognate cdii immunity protein
65c4yweE_



not modelled 9.3 22
PDB header:oxidoreductase
Chain: E: PDB Molecule:putative aldehyde dehydrogenase;
PDBTitle: crystal structure of a putative aldehyde dehydrogenase from2 burkholderia cenocepacia
66c1t90B_



not modelled 9.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:probable methylmalonate-semialdehyde dehydrogenase;
PDBTitle: crystal structure of methylmalonate semialdehyde dehydrogenase from2 bacillus subtilis
67d1o04a_



not modelled 9.3 27
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
68c2jg7G_



not modelled 9.2 18
PDB header:oxidoreductase
Chain: G: PDB Molecule:antiquitin;
PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity
69d1ag8a_



not modelled 9.1 24
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
70c4xsjA_



not modelled 9.0 53
PDB header:transport protein
Chain: A: PDB Molecule:lysozyme,calcium uniporter protein, mitochondrial;
PDBTitle: crystal structure of the n-terminal domain of the human mitochondrial2 calcium uniporter fused with t4 lysozyme
71d1euha_



not modelled 8.9 9
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
72c3ed6B_



not modelled 8.7 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:betaine aldehyde dehydrogenase;
PDBTitle: 1.7 angstrom resolution crystal structure of betaine aldehyde2 dehydrogenase (betb) from staphylococcus aureus
73c4h73E_



not modelled 8.7 9
PDB header:oxidoreductase
Chain: E: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: thermostable aldehyde dehydrogenase from pyrobaculum sp. complexed2 with nadp+
74c5x5uB_



not modelled 8.6 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:alpha-ketoglutaric semialdehyde dehydrogenase;
PDBTitle: crystal strcuture of alpha-ketoglutarate-semialdehyde dehydrogenase2 (kgsadh) complexed with nad
75c3k2wD_



not modelled 8.5 11
PDB header:oxidoreductase
Chain: D: PDB Molecule:betaine-aldehyde dehydrogenase;
PDBTitle: crystal structure of betaine-aldehyde dehydrogenase from2 pseudoalteromonas atlantica t6c
76c4knaA_



not modelled 8.4 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:n-succinylglutamate 5-semialdehyde dehydrogenase;
PDBTitle: crystal structure of an n-succinylglutamate 5-semialdehyde2 dehydrogenase from burkholderia thailandensis
77c6g72A_



not modelled 8.3 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh-ubiquinone oxidoreductase chain 3;
PDBTitle: mouse mitochondrial complex i in the deactive state
78d1ky8a_



not modelled 8.2 18
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
79c5v89A_



not modelled 8.2 15
PDB header:ligase / protein binding
Chain: A: PDB Molecule:dcn1-like protein 4;
PDBTitle: structure of dcn4 pony domain bound to cul1 whb
80c6ghcA_



not modelled 8.2 29
PDB header:hydrolase
Chain: A: PDB Molecule:5-methylcytosine-specific restriction enzyme a;
PDBTitle: modification dependent ecokmcra restriction endonuclease
81c5omtA_



not modelled 7.8 7
PDB header:hydrolase
Chain: A: PDB Molecule:nucb;
PDBTitle: endonuclease nucb
82c3topA_



not modelled 7.7 29
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:maltase-glucoamylase, intestinal;
PDBTitle: crystral structure of the c-terminal subunit of human maltase-2 glucoamylase in complex with acarbose
83c5dkyA_



not modelled 7.6 10
PDB header:hydrolase
Chain: A: PDB Molecule:alpha glucosidase-like protein;
PDBTitle: crystal structure of glucosidase ii alpha subunit (dnj-bound from)
84c4xpsA_



not modelled 7.6 26
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-glucosidase;
PDBTitle: crystal structure of the mutant d365a of pedobacter saltans gh312 alpha-galactosidase complexed with p-nitrophenyl-alpha-3 galactopyranoside
85c5izdE_



not modelled 7.3 13
PDB header:oxidoreductase
Chain: E: PDB Molecule:d-glyceraldehyde dehydrogenase (nadp(+));
PDBTitle: wild-type glyceraldehyde dehydrogenase from thermoplasma acidophilum2 in complex with nadp
86c4gaoA_



not modelled 7.3 19
PDB header:ligase/peptide
Chain: A: PDB Molecule:dcn1-like protein 2;
PDBTitle: dcnl complex with n-terminally acetylated nedd8 e2 peptide
87c3i44A_



not modelled 7.2 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: crystal structure of aldehyde dehydrogenase from bartonella2 henselae at 2.0a resolution
88d1a4sa_



not modelled 7.1 18
Fold:ALDH-like
Superfamily:ALDH-like
Family:ALDH-like
89c2bpbB_



not modelled 7.1 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b;
PDBTitle: sulfite dehydrogenase from starkeya novella
90c5m73D_



not modelled 7.0 43
PDB header:rna binding protein
Chain: D: PDB Molecule:signal recognition particle subunit srp72;
PDBTitle: structure of the human srp s domain with srp72 rna-binding domain
91c5kzxA_



not modelled 7.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:lysosomal alpha-glucosidase;
PDBTitle: crystal structure of human gaa
92c4innA_



not modelled 7.0 11
PDB header:transport protein
Chain: A: PDB Molecule:hp1028;
PDBTitle: protein hp1028 from the human pathogen helicobacter pylori belongs to2 the lipocalin family
93c6feyH_



not modelled 6.8 33
PDB header:peptide binding protein
Chain: H: PDB Molecule:probable insulin-like peptide 5;
PDBTitle: crystal structure of drosophila neural ectodermal development factor2 imp-l2 with drosophila dilp5 insulin
94c6feyF_



not modelled 6.6 33
PDB header:peptide binding protein
Chain: F: PDB Molecule:probable insulin-like peptide 5;
PDBTitle: crystal structure of drosophila neural ectodermal development factor2 imp-l2 with drosophila dilp5 insulin
95c2wfuB_



not modelled 6.5 33
PDB header:signaling protein
Chain: B: PDB Molecule:probable insulin-like peptide 5 b chain;
PDBTitle: crystal structure of dilp5 variant db
96c2wfvB_



not modelled 6.5 33
PDB header:signaling protein
Chain: B: PDB Molecule:probable insulin-like peptide 5 b chain;
PDBTitle: crystal structure of dilp5 variant c4
97c3lppA_



not modelled 6.4 18
PDB header:hydrolase
Chain: A: PDB Molecule:sucrase-isomaltase;
PDBTitle: crystal complex of n-terminal sucrase-isomaltase with kotalanol
98d1miwa2



not modelled 6.3 22
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:Poly A polymerase head domain-like
99c3rlcA_



not modelled 6.2 20
PDB header:structural protein
Chain: A: PDB Molecule:a1 protein;
PDBTitle: crystal structure of the read-through domain from bacteriophage qbeta2 a1 protein, hexagonal crystal form

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