Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2974c_(-)_3329959_3331371
DateThu Aug 8 16:20:13 BST 2019
Unique Job ID436e82600363152c
SequenceLNGARGNSGV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:29.798 Y:47.883 Z:43.370
Model (left) based on template c2btdA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:pts-dependent dihydroxyacetone kinase;
PDBTitle: crystal structure of dhal from e. coli
Confidence and coverage
Confidence: 99.9% Coverage: 27%
128 residues ( 27% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
320 residues ( 68%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2btdA_
99.9 18
PDB header:transferase
Chain: A: PDB Molecule:pts-dependent dihydroxyacetone kinase;
PDBTitle: crystal structure of dhal from e. coli
2d3cr3a1
99.8 17
Fold:DhaL-like
Superfamily:DhaL-like
Family:DhaL-like
3d1un8a1
99.8 24
Fold:DhaL-like
Superfamily:DhaL-like
Family:DhaL-like
4c1un9B_
99.7 24
PDB header:kinase
Chain: B: PDB Molecule:dihydroxyacetone kinase;
PDBTitle: crystal structure of the dihydroxyacetone kinase from c.2 freundii in complex with amp-pnp and mg2+
5c4x9xA_
99.0 8
PDB header:transferase
Chain: A: PDB Molecule:degv domain-containing protein mw1315;
PDBTitle: biochemical roles for conserved residues in the bacterial fatty acid2 binding protein family
6d1mgpa_
98.9 15
Fold:DAK1/DegV-like
Superfamily:DAK1/DegV-like
Family:DegV-like
7c1mgpA_
98.9 15
PDB header:lipid binding protein
Chain: A: PDB Molecule:hypothetical protein tm841;
PDBTitle: hypothetical protein tm841 from thermotoga maritima reveals2 fatty acid binding function
8c6cngA_
98.8 13
PDB header:transferase
Chain: A: PDB Molecule:fatty acid kinase (fak) b3 protein;
PDBTitle: the x-ray crystal structure of the streptococcus pneumoniae fatty acid2 kinase (fak) b3 protein loaded with linoleic acid to 1.47 angstrom3 resolution
9c2g7zB_
98.7 9
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:conserved hypothetical protein spy1493;
PDBTitle: conserved degv-like protein of unknown function from streptococcus2 pyogenes m1 gas binds long-chain fatty acids
10d1pzxa_
98.2 10
Fold:DAK1/DegV-like
Superfamily:DAK1/DegV-like
Family:DegV-like
11c3fysA_
98.1 14
PDB header:fatty acid-binding protein
Chain: A: PDB Molecule:protein degv;
PDBTitle: crystal structure of degv, a fatty acid binding protein2 from bacillus subtilis
12c3lupA_
98.1 13
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:degv family protein;
PDBTitle: crystal structure of fatty acid binding degv family protein sag13422 from streptococcus agalactiae
13c6dj6B_
98.1 14
PDB header:transferase
Chain: B: PDB Molecule:fatty acid kinase (fak) b2 protein (spr1019);
PDBTitle: the x-ray crystal structure of the streptococcus pneumoniae fatty acid2 kinase (fak) b2 protein loaded with cis-oleic acid to 1.9 angstrom3 resolution
14c3pl5A_
98.0 13
PDB header:lipid binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: fatty acid binding protein
15c5utoB_
98.0 12
PDB header:transport protein
Chain: B: PDB Molecule:edd domain protein, degv family;
PDBTitle: the crystal structure of the staphylococcus aureus fatty acid kinase2 (fak) b1 protein loaded with palmitic acid to 1.83 angstrom3 resolution
16c3jr7A_
98.0 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized egv family protein cog1307;
PDBTitle: the crystal structure of the protein of degv family cog1307 with2 unknown function from ruminococcus gnavus atcc 29149
17c2dt8A_
97.9 18
PDB header:lipid binding protein
Chain: A: PDB Molecule:degv family protein;
PDBTitle: fatty acid binding of a degv family protein from thermus thermophilus
18c3fdjA_
97.9 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:degv family protein;
PDBTitle: the structure of a degv family protein from eubacterium eligens.
19c6dkeA_
97.9 17
PDB header:transferase
Chain: A: PDB Molecule:fatty acid kinase (fak) b1 protein;
PDBTitle: the x-ray crystal structure of streptococcus pneumoniae fatty acid2 kinase (fak) b1 protein loaded with palmitic acid (c16:0) to 1.763 angstrom resolution
20c3nyiA_
97.4 9
PDB header:lipid binding protein
Chain: A: PDB Molecule:fat acid-binding protein;
PDBTitle: the crystal structure of a fat acid (stearic acid)-binding protein2 from eubacterium ventriosum atcc 27560.
21c3eglC_
not modelled 96.1 14
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:degv family protein;
PDBTitle: crystal structure of degv family protein cg2579 from corynebacterium2 glutamicum
22d3ct6a1
not modelled 95.7 11
Fold:PTS system fructose IIA component-like
Superfamily:PTS system fructose IIA component-like
Family:DhaM-like
23c4wzzA_
not modelled 94.6 15
PDB header:transport protein
Chain: A: PDB Molecule:putative sugar abc transporter, substrate-binding protein;
PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from clostridium phytofermentas (cphy_0583, target efi-3 511148) with bound l-rhamnose
24d1ccwa_
not modelled 94.2 19
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
25c6dspB_
not modelled 91.5 10
PDB header:signaling protein
Chain: B: PDB Molecule:autoinducer 2-binding protein lsrb;
PDBTitle: lsrb from clostridium saccharobutylicum in complex with ai-2
26c4pz0A_
not modelled 91.5 13
PDB header:sugar binding protein
Chain: A: PDB Molecule:sugar abc transporter, sugar-binding protein;
PDBTitle: the crystal structure of a solute binding protein from bacillus2 anthracis str. ames in complex with quorum-sensing signal3 autoinducer-2 (ai-2)
27c1y80A_
not modelled 90.2 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted cobalamin binding protein;
PDBTitle: structure of a corrinoid (factor iiim)-binding protein from moorella2 thermoacetica
28d1fmfa_
not modelled 88.8 21
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
29d7reqa2
not modelled 87.2 15
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
30c5braA_
not modelled 86.9 16
PDB header:solute-binding protein
Chain: A: PDB Molecule:putative periplasmic binding protein with substrate ribose;
PDBTitle: crystal structure of a putative periplasmic solute binding protein2 (ipr025997) from ochrobactrum anthropi atcc49188 (oant_2843, target3 efi-511085)
31c2yxbA_
not modelled 85.9 16
PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
32c6fjlD_
not modelled 81.3 22
PDB header:metal binding protein
Chain: D: PDB Molecule:abc-type fe3+ transport system, periplasmic component;
PDBTitle: structure of ibps from dickeya dadantii
33d1xvla1
not modelled 81.3 10
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:TroA-like
34c1w5fA_
not modelled 80.3 12
PDB header:cell division
Chain: A: PDB Molecule:cell division protein ftsz;
PDBTitle: ftsz, t7 mutated, domain swapped (t. maritima)
35d3b48a1
not modelled 80.0 7
Fold:PTS system fructose IIA component-like
Superfamily:PTS system fructose IIA component-like
Family:DhaM-like
36c3hjtB_
not modelled 79.7 13
PDB header:cell adhesion, transport protein
Chain: B: PDB Molecule:lmb;
PDBTitle: structure of laminin binding protein (lmb) of streptococcus agalactiae2 a bifunctional protein with adhesin and metal transporting activity
37c3ezxA_
not modelled 76.5 16
PDB header:transferase
Chain: A: PDB Molecule:monomethylamine corrinoid protein 1;
PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein
38d1psza_
not modelled 75.2 7
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:TroA-like
39c4kvfA_
not modelled 74.7 13
PDB header:transport protein
Chain: A: PDB Molecule:rhamnose abc transporter, periplasmic rhamnose-binding
PDBTitle: the crystal structure of a rhamnose abc transporter, periplasmic2 rhamnose-binding protein from kribbella flavida dsm 17836
40c1bmtB_
not modelled 73.3 19
PDB header:methyltransferase
Chain: B: PDB Molecule:methionine synthase;
PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
41c5c8eC_
not modelled 72.6 28
PDB header:transcription regulator/dna
Chain: C: PDB Molecule:light-dependent transcriptional regulator carh;
PDBTitle: crystal structure of thermus thermophilus carh bound to2 adenosylcobalamin and a 26-bp dna segment
42c2i2xD_
not modelled 72.4 26
PDB header:transferase
Chain: D: PDB Molecule:methyltransferase 1;
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
43c3gx1A_
not modelled 71.4 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin1832 protein;
PDBTitle: crystal structure of a domain of lin1832 from listeria innocua
44d3bula2
not modelled 70.7 19
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
45d1wh9a_
not modelled 68.7 16
Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
46c4pe6B_
not modelled 68.3 15
PDB header:solute-binding protein
Chain: B: PDB Molecule:putative abc transporter;
PDBTitle: crystal structure of abc transporter solute binding protein from2 thermobispora bispora dsm 43833
47c2vxyA_
not modelled 67.5 17
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsz;
PDBTitle: the structure of ftsz from bacillus subtilis at 1.7a2 resolution
48c4bloC_
not modelled 67.1 12
PDB header:hydrolase
Chain: C: PDB Molecule:packaging enzyme p4;
PDBTitle: p4 protein from bacteriophage phi6 in complex with adp
49d1jhda2
not modelled 66.8 13
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
50c3whpA_
not modelled 66.8 28
PDB header:gene regulation
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of the c-terminal domain of themus thermophilus litr2 in complex with cobalamin
51d1lssa_
not modelled 65.4 13
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Potassium channel NAD-binding domain
52d1oi2a_
not modelled 65.3 16
Fold:DAK1/DegV-like
Superfamily:DAK1/DegV-like
Family:DAK1
53c3d02A_
not modelled 65.1 14
PDB header:sugar binding protein
Chain: A: PDB Molecule:putative laci-type transcriptional regulator;
PDBTitle: crystal structure of periplasmic sugar-binding protein2 (yp_001338366.1) from klebsiella pneumoniae subsp. pneumoniae mgh3 78578 at 1.30 a resolution
54c2iu6B_
not modelled 64.9 17
PDB header:transferase
Chain: B: PDB Molecule:dihydroxyacetone kinase;
PDBTitle: regulation of the dha operon of lactococcus lactis
55c4jgiB_
not modelled 63.8 23
PDB header:protein binding
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: 1.5 angstrom crystal structure of a novel cobalamin-binding protein2 from desulfitobacterium hafniense dcb-2
56c2cw6B_
not modelled 63.5 13
PDB header:lyase
Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial;
PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria
57c2vawA_
not modelled 62.4 16
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsz;
PDBTitle: ftsz pseudomonas aeruginosa gdp
58c4xrvB_
not modelled 61.9 13
PDB header:metal binding protein
Chain: B: PDB Molecule:periplasmic solute binding protein;
PDBTitle: structure of a zn abc transporter substrate binding protein from2 paracoccus denitrificans
59c2o1eB_
not modelled 61.1 10
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ycdh;
PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583
60c6mspA_
not modelled 61.0 16
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed protein foldit3;
PDBTitle: de novo designed protein foldit3
61c3llvA_
not modelled 60.5 19
PDB header:nad(p) binding protein
Chain: A: PDB Molecule:exopolyphosphatase-related protein;
PDBTitle: the crystal structure of the nad(p)-binding domain of an2 exopolyphosphatase-related protein from archaeoglobus fulgidus to3 1.7a
62d1tjya_
not modelled 59.2 14
Fold:Periplasmic binding protein-like I
Superfamily:Periplasmic binding protein-like I
Family:L-arabinose binding protein-like
63c4blpD_
not modelled 59.0 16
PDB header:hydrolase
Chain: D: PDB Molecule:packaging enzyme p4;
PDBTitle: p4 protein from bacteriophage phi13
64c3c9hB_
not modelled 58.8 10
PDB header:transport protein
Chain: B: PDB Molecule:abc transporter, substrate binding protein;
PDBTitle: crystal structure of the substrate binding protein of the abc2 transporter from agrobacterium tumefaciens
65c3e6sD_
not modelled 57.9 18
PDB header:oxidoreductase
Chain: D: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin soaked with iron from pseudo-nitzschia2 multiseries
66c1ofuB_
not modelled 56.8 16
PDB header:bacterial cell division inhibitor
Chain: B: PDB Molecule:cell division protein ftsz;
PDBTitle: crystal structure of sula:ftsz from pseudomonas aeruginosa
67c2kz0A_
not modelled 56.8 13
PDB header:transcription
Chain: A: PDB Molecule:bola family protein;
PDBTitle: solution structure of a bola protein (ech_0303) from ehrlichia2 chaffeensis. seattle structural genomics center for infectious3 disease target ehcha.10365.a
68d1pjwa_
not modelled 56.5 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
69c3tr3A_
not modelled 56.3 3
PDB header:unknown function
Chain: A: PDB Molecule:bola;
PDBTitle: structure of a bola protein homologue from coxiella burnetii
70d1q77a_
not modelled 56.3 10
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
71c4hh3C_
not modelled 56.2 21
PDB header:flavoprotein/transcription
Chain: C: PDB Molecule:appa protein;
PDBTitle: structure of the appa-ppsr2 core complex from rb. sphaeroides
72c1jhdA_
not modelled 56.1 13
PDB header:transferase
Chain: A: PDB Molecule:sulfate adenylyltransferase;
PDBTitle: crystal structure of bacterial atp sulfurylase from the2 riftia pachyptila symbiont
73c3rf7A_
not modelled 56.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:iron-containing alcohol dehydrogenase;
PDBTitle: crystal structure of an iron-containing alcohol dehydrogenase2 (sden_2133) from shewanella denitrificans os-217 at 2.12 a resolution
74c4r3uD_
not modelled 55.2 19
PDB header:isomerase
Chain: D: PDB Molecule:2-hydroxyisobutyryl-coa mutase small subunit;
PDBTitle: crystal structure of 2-hydroxyisobutyryl-coa mutase
75c2q1yB_
not modelled 55.0 20
PDB header:cell cycle, signaling protein
Chain: B: PDB Molecule:cell division protein ftsz;
PDBTitle: crystal structure of cell division protein ftsz from mycobacterium2 tuberculosis in complex with gtp-gamma-s
76c2odaB_
not modelled 54.9 18
PDB header:protein binding
Chain: B: PDB Molecule:hypothetical protein pspto_2114;
PDBTitle: crystal structure of pspto_2114
77c1xrsB_
not modelled 54.6 15
PDB header:isomerase
Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit;
PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine
78c2fqxA_
not modelled 54.4 15
PDB header:transport protein
Chain: A: PDB Molecule:membrane lipoprotein tmpc;
PDBTitle: pnra from treponema pallidum complexed with guanosine
79c3okfA_
not modelled 53.9 18
PDB header:lyase
Chain: A: PDB Molecule:3-dehydroquinate synthase;
PDBTitle: 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase2 (arob) from vibrio cholerae
80c3ct4B_
not modelled 53.2 13
PDB header:transferase
Chain: B: PDB Molecule:pts-dependent dihydroxyacetone kinase, dihydroxyacetone-
PDBTitle: structure of dha-kinase subunit dhak from l. lactis
81d1zbsa2
not modelled 52.9 23
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:BadF/BadG/BcrA/BcrD-like
82c3clhA_
not modelled 52.6 15
PDB header:lyase
Chain: A: PDB Molecule:3-dehydroquinate synthase;
PDBTitle: crystal structure of 3-dehydroquinate synthase (dhqs)from2 helicobacter pylori
83c3mfqB_
not modelled 52.4 13
PDB header:metal binding protein
Chain: B: PDB Molecule:high-affinity zinc uptake system protein znua;
PDBTitle: a glance into the metal binding specificity of troa: where elaborate2 behaviors occur in the active center
84c5wb4H_
not modelled 49.4 24
PDB header:transferase
Chain: H: PDB Molecule:n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-
PDBTitle: crystal structure of the tara wall teichoic acid glycosyltransferase
85c2rjoA_
not modelled 48.5 13
PDB header:signaling protein
Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein;
PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans
86d1ztxe1
not modelled 48.3 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
87c1s1hC_
not modelled 48.3 16
PDB header:ribosome
Chain: C: PDB Molecule:40s ribosomal protein s3;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s4 ribosomal subunit is in file 1s1i.
88c3uzeC_
not modelled 47.8 12
PDB header:immune system
Chain: C: PDB Molecule:envelope protein;
PDBTitle: crystal structure of the dengue virus serotype 3 envelope protein2 domain iii in complex with the variable domains of mab 4e11
89c2mcqA_
not modelled 47.8 23
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein rp812;
PDBTitle: nmr structure of a bola-like hypothetical protein rp812 from2 rickettsia prowazekii, seattle structural genomics center for3 infectious disease (ssgcid)
90d1s6na_
not modelled 47.7 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
91c2ftpA_
not modelled 47.7 16
PDB header:lyase
Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase;
PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa
92d2uubc1
not modelled 46.7 22
Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
93c3egpA_
not modelled 45.5 19
PDB header:viral protein
Chain: A: PDB Molecule:envelope protein;
PDBTitle: crystal structure analysis of dengue-1 envelope protein2 domain iii
94c2jqmA_
not modelled 44.4 19
PDB header:transferase
Chain: A: PDB Molecule:envelope protein e;
PDBTitle: yellow fever envelope protein domain iii nmr structure2 (s288-k398)
95d1pvda2
not modelled 44.2 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
96d1ok8a1
not modelled 44.1 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
97c3h75A_
not modelled 43.9 13
PDB header:sugar binding protein
Chain: A: PDB Molecule:periplasmic sugar-binding domain protein;
PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens
98c3gdwA_
not modelled 43.8 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sigma-54 interaction domain protein;
PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis
99c2ps3A_
not modelled 43.4 16
PDB header:metal transport
Chain: A: PDB Molecule:high-affinity zinc uptake system protein znua;
PDBTitle: structure and metal binding properties of znua, a periplasmic zinc2 transporter from escherichia coli
100d2qalc1
not modelled 43.1 24
Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
101d2ptza1
not modelled 42.9 14
Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:Enolase
102c6hyhA_
not modelled 42.4 13
PDB header:sugar binding protein
Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator;
PDBTitle: crystal structure of msmeg_1712 from mycobacterium smegmatis in2 complex with beta-d-fucofuranose
103c5xyiD_
not modelled 42.2 14
PDB header:ribosome
Chain: D: PDB Molecule:ribosomal protein s3, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
104c2h0pA_
not modelled 41.9 14
PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein;
PDBTitle: nmr structure of the dengue-4 virus envelope protein domain2 iii
105c6r6kB_
not modelled 40.8 16
PDB header:protein transport
Chain: B: PDB Molecule:abc transporter substrate-binding protein;
PDBTitle: structure of a fpvc mutant from pseudomonas aeruginosa
106c4av2P_
not modelled 40.6 22
PDB header:protein transport
Chain: P: PDB Molecule:pilp protein;
PDBTitle: single particle electron microscopy of pilq dodecameric complexes from2 neisseria meningitidis.
107d1un8a4
not modelled 40.2 18
Fold:DAK1/DegV-like
Superfamily:DAK1/DegV-like
Family:DAK1
108c2xznC_
not modelled 39.9 8
PDB header:ribosome
Chain: C: PDB Molecule:kh domain containing protein;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
109d1ad1a_
not modelled 39.7 18
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
110c2r6r1_
not modelled 38.4 18
PDB header:cell cycle
Chain: 1: PDB Molecule:cell division protein ftsz;
PDBTitle: aquifex aeolicus ftsz
111c3zeyX_
not modelled 38.1 11
PDB header:ribosome
Chain: X: PDB Molecule:40s ribosomal protein s3, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
112c4af1A_
not modelled 37.9 20
PDB header:hydrolase
Chain: A: PDB Molecule:peptide chain release factor subunit 1;
PDBTitle: archeal release factor arf1
113c3eq5G_
not modelled 36.9 28
PDB header:signaling protein
Chain: G: PDB Molecule:ski-like protein;
PDBTitle: crystal structure of fragment 137 to 238 of the human ski-like protein
114c4yajA_
not modelled 36.4 12
PDB header:ligase
Chain: A: PDB Molecule:alpha subunit of acetyl-coenzyme a synthetase
PDBTitle: ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a2 synthetase 1 (apo form)
115c3ewbX_
not modelled 36.3 12
PDB header:transferase
Chain: X: PDB Molecule:2-isopropylmalate synthase;
PDBTitle: crystal structure of n-terminal domain of putative 2-isopropylmalate2 synthase from listeria monocytogenes
116c2h9aB_
not modelled 36.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase, iron-sulfur protein;
PDBTitle: corrinoid iron-sulfur protein
117d1ovma2
not modelled 36.1 22
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
118d1xrsb1
not modelled 35.9 15
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
119c1xs3A_
not modelled 35.8 6
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein xc975;
PDBTitle: solution structure analysis of the xc975 protein
120c3izbB_
not modelled 35.2 16
PDB header:ribosome
Chain: B: PDB Molecule:40s ribosomal protein rps3 (s3p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite