Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2981c_(ddl)_3336806_3337927
DateThu Aug 8 16:20:14 BST 2019
Unique Job IDe3c88eba809684d3
SequenceVSANDRRDRR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:62.134 Y:54.928 Z:61.371
Model (left) based on template c3i12A_
Top template information
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-d-alanine ligase a;
PDBTitle: the crystal structure of the d-alanyl-alanine synthetase a from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2
Confidence and coverage
Confidence:100.0% Coverage: 94%
349 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3i12A_
100.0 43
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-d-alanine ligase a;
PDBTitle: the crystal structure of the d-alanyl-alanine synthetase a from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2
2c1ehiB_
100.0 33
PDB header:ligase
Chain: B: PDB Molecule:d-alanine:d-lactate ligase;
PDBTitle: d-alanine:d-lactate ligase (lmddl2) of vancomycin-resistant2 leuconostoc mesenteroides
3c2i80B_
100.0 38
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies
4c4fu0B_
100.0 33
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase 7;
PDBTitle: crystal structure of vang d-ala:d-ser ligase from enterococcus2 faecalis
5c3lwbA_
100.0 100
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of apo d-alanine:d-alanine ligase (ddl) from2 mycobacterium tuberculosis
6c3e5nA_
100.0 43
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-d-alanine ligase a;
PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331
7c1e4eB_
100.0 36
PDB header:ligase
Chain: B: PDB Molecule:vancomycin/teicoplanin a-type resistance protein vana;
PDBTitle: d-alanyl-d-lacate ligase
8c3tqtB_
100.0 40
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: structure of the d-alanine-d-alanine ligase from coxiella burnetii
9c3se7A_
100.0 36
PDB header:ligase
Chain: A: PDB Molecule:vana;
PDBTitle: ancient vana
10c6dgiA_
100.0 33
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: the crystal structure of d-alanyl-alanine synthetase a from vibrio2 cholerae o1 biovar eltor str. n16961
11c2pvpB_
100.0 23
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori
12c2dlnA_
100.0 35
PDB header:ligase(peptidoglycan synthesis)
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine ligase at 2.32 angstroms resolution
13c3r23B_
100.0 30
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis
14c2zdqA_
100.0 44
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine:d-alanine ligase with atp2 and d-alanine:d-alanine from thermus thermophius hb8
15c5dmxC_
100.0 35
PDB header:ligase
Chain: C: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from acinetobacter2 baumannii, space group p212121
16c4egjD_
100.0 39
PDB header:ligase
Chain: D: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from burkholderia2 xenovorans
17c4egqD_
100.0 34
PDB header:ligase
Chain: D: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase b from burkholderia2 pseudomallei
18c3k3pA_
100.0 38
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans
19c1m6vE_
100.0 16
PDB header:ligase
Chain: E: PDB Molecule:carbamoyl phosphate synthetase large chain;
PDBTitle: crystal structure of the g359f (small subunit) point mutant of2 carbamoyl phosphate synthetase
20c5douC_
100.0 15
PDB header:ligase
Chain: C: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 ligand-bound form
21c2dzdB_
not modelled 100.0 18
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of the biotin carboxylase domain of pyruvate2 carboxylase
22c1kjjA_
not modelled 100.0 21
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase 2;
PDBTitle: crystal structure of glycniamide ribonucleotide transformylase in2 complex with mg-atp-gamma-s
23c3g8cB_
not modelled 100.0 18
PDB header:ligase
Chain: B: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase in complex with biotin,2 bicarbonate, adp and mg ion
24c5dotA_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 apo form
25c3bg5C_
not modelled 100.0 17
PDB header:ligase
Chain: C: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of staphylococcus aureus pyruvate carboxylase
26c3ouzA_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni
27c2xd4A_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase
28c1ulzA_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain;
PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
29c2vpqA_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of biotin carboxylase from s. aureus2 complexed with amppnp
30c3tw6B_
not modelled 100.0 17
PDB header:ligase/activator
Chain: B: PDB Molecule:pyruvate carboxylase protein;
PDBTitle: structure of rhizobium etli pyruvate carboxylase t882a with the2 allosteric activator, acetyl coenzyme-a
31c3lp8A_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis
32c2yyaB_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of gar synthetase from aquifex aeolicus
33c1vkzA_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution
34c2hjwA_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: crystal structure of the bc domain of acc2
35c1w96B_
not modelled 100.0 16
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase;
PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a
36c4mamB_
not modelled 100.0 14
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: the crystal structure of phosphoribosylaminoimidazole carboxylase2 atpase subunit of francisella tularensis subsp. tularensis schu s4 in3 complex with an adp analog, amp-cp
37c2ip4A_
not modelled 100.0 24
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of glycinamide ribonucleotide synthetase from2 thermus thermophilus hb8
38c3u9sA_
not modelled 100.0 21
PDB header:ligase
Chain: A: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
39c4wd3B_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:l-amino acid ligase;
PDBTitle: crystal structure of an l-amino acid ligase riza
40c5mlkA_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: biotin dependent carboxylase acca3 dimer from mycobacterium2 tuberculosis (rv3285)
41c2gpwC_
not modelled 100.0 19
PDB header:ligase
Chain: C: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli.
42c2ys6A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase;
PDBTitle: crystal structure of gar synthetase from geobacillus kaustophilus
43c3gidB_
not modelled 100.0 15
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa carboxylase 22 (acc2) in complex with soraphen a
44c3q2oB_
not modelled 100.0 17
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of purk: n5-carboxyaminoimidazole ribonucleotide2 synthetase
45c5vz0D_
not modelled 100.0 17
PDB header:ligase
Chain: D: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of lactococcus lactis pyruvate carboxylase g746a2 mutant in complex with cyclic-di-amp
46c3u9sE_
not modelled 100.0 20
PDB header:ligase
Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
47c3n6rK_
not modelled 100.0 18
PDB header:ligase
Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
48c4qslE_
not modelled 100.0 16
PDB header:ligase
Chain: E: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of listeria monocytogenes pyruvate carboxylase
49c3etjB_
not modelled 100.0 18
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase
PDBTitle: crystal structure e. coli purk in complex with mg, adp, and2 pi
50c3hblA_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of s. aureus pyruvate carboxylase t908a mutant
51c4dimA_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase;
PDBTitle: crystal structure of phosphoribosylglycinamide synthetase from2 anaerococcus prevotii
52c3vmmA_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:alanine-anticapsin ligase bacd;
PDBTitle: crystal structure of bacd, an l-amino acid dipeptide ligase from2 bacillus subtilis
53c4qslC_
not modelled 100.0 14
PDB header:ligase
Chain: C: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of listeria monocytogenes pyruvate carboxylase
54c3uvzB_
not modelled 100.0 20
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria
55c3orqA_
not modelled 100.0 16
PDB header:ligase,biosynthetic protein
Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide synthetase;
PDBTitle: crystal structure of n5-carboxyaminoimidazole synthetase from2 staphylococcus aureus complexed with adp
56c2qk4A_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3;
PDBTitle: human glycinamide ribonucleotide synthetase
57c3k5iB_
not modelled 100.0 19
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosyl-aminoimidazole carboxylase;
PDBTitle: crystal structure of n5-carboxyaminoimidazole synthase from2 aspergillus clavatus in complex with adp and 5-aminoimadazole3 ribonucleotide
58d1ehia2
not modelled 100.0 29
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
59c3aw8A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide2 synthetase from thermus thermophilus hb8
60c2dwcB_
not modelled 100.0 20
PDB header:transferase
Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl
PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp
61c4ffnA_
not modelled 100.0 18
PDB header:ligase/substrate
Chain: A: PDB Molecule:pylc;
PDBTitle: pylc in complex with d-ornithine and amppnp
62c5vevB_
not modelled 100.0 15
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from neisseria2 gonorrhoeae
63d1e4ea2
not modelled 100.0 36
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
64c3ax6C_
not modelled 100.0 20
PDB header:ligase
Chain: C: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide2 synthetase from thermotoga maritima
65d1iowa2
not modelled 100.0 32
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
66c4iwyA_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:ribosomal protein s6 modification protein;
PDBTitle: semet-substituted rimk structure
67c1gsoA_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:protein (glycinamide ribonucleotide synthetase);
PDBTitle: glycinamide ribonucleotide synthetase (gar-syn) from e.2 coli.
68c3votB_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:l-amino acid ligase, bl00235;
PDBTitle: crystal structure of l-amino acid ligase from bacillus licheniformis
69c6g2dC_
not modelled 100.0 17
PDB header:ligase
Chain: C: PDB Molecule:acetyl-coa carboxylase 1;
PDBTitle: citrate-induced acetyl-coa carboxylase (acc-cit) filament at 5.4 a2 resolution
70c5cskB_
not modelled 100.0 16
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of yeast acetyl-coa carboxylase, unbiotinylated
71c5h80A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:carboxylase;
PDBTitle: biotin carboxylase domain of single-chain bacterial carboxylase
72c2pn1A_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:carbamoylphosphate synthase large subunit;
PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution
73c3df7A_
not modelled 100.0 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative atp-grasp superfamily protein;
PDBTitle: crystal structure of a putative atp-grasp superfamily protein from2 archaeoglobus fulgidus
74c2r85B_
not modelled 100.0 18
PDB header:unknown function
Chain: B: PDB Molecule:purp protein pf1517;
PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp
75c5i47A_
not modelled 100.0 22
PDB header:biosynthetic protein
Chain: A: PDB Molecule:rimk domain protein atp-grasp;
PDBTitle: crystal structure of rimk domain protein atp-grasp from sphaerobacter2 thermophilus dsm 20745
76c3vpbC_
not modelled 100.0 18
PDB header:ligase
Chain: C: PDB Molecule:putative acetylornithine deacetylase;
PDBTitle: argx from sulfolobus tokodaii complexed with2 lysw/glu/adp/mg/zn/sulfate
77c5k2mG_
not modelled 100.0 18
PDB header:biosynthetic protein
Chain: G: PDB Molecule:rimk-related lysine biosynthesis protein;
PDBTitle: bifunctional lysx/argx from thermococcus kodakarensis with lysw-gamma-2 aaa
78c1z2pX_
not modelled 100.0 13
PDB header:transferase
Chain: X: PDB Molecule:inositol 1,3,4-trisphosphate 5/6-kinase;
PDBTitle: inositol 1,3,4-trisphosphate 5/6-kinase in complex with mg2+/amp-2 pcp/ins(1,3,4)p3
79c1uc8B_
not modelled 100.0 22
PDB header:biosynthetic protein
Chain: B: PDB Molecule:lysine biosynthesis enzyme;
PDBTitle: crystal structure of a lysine biosynthesis enzyme, lysx,2 from thermus thermophilus hb8
80c5cslA_
not modelled 100.0 15
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of the 500 kd yeast acetyl-coa carboxylase2 holoenzyme dimer
81c2z04A_
not modelled 100.0 21
PDB header:lyase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase
PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus
82c5ig8A_
not modelled 100.0 12
PDB header:ligase
Chain: A: PDB Molecule:atp grasp ligase;
PDBTitle: crystal structure of macrocyclase mdnb from microcystis aeruginosa mrc
83c5ig9H_
not modelled 100.0 12
PDB header:ligase
Chain: H: PDB Molecule:atp grasp ligase;
PDBTitle: crystal structure of macrocyclase mdnc bound with precursor peptide2 mdna from microcystis aeruginosa mrc
84c3ln6A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 streptococcus agalactiae
85d1vkza3
not modelled 100.0 15
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
86d1a9xa5
not modelled 100.0 16
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
87d1w96a3
not modelled 100.0 18
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
88c3jzfA_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase from e. coli in2 complex with benzimidazoles series
89c5mlkB_
not modelled 100.0 18
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: biotin dependent carboxylase acca3 dimer from mycobacterium2 tuberculosis (rv3285)
90d3etja3
not modelled 100.0 18
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
91c1pk8D_
not modelled 100.0 14
PDB header:membrane protein
Chain: D: PDB Molecule:rat synapsin i;
PDBTitle: crystal structure of rat synapsin i c domain complexed to2 ca.atp
92d2r7ka2
not modelled 100.0 14
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
93c1i7nA_
not modelled 100.0 15
PDB header:neuropeptide
Chain: A: PDB Molecule:synapsin ii;
PDBTitle: crystal structure analysis of the c domain of synapsin ii2 from rat brain
94d2j9ga3
not modelled 100.0 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
95d1a9xa6
not modelled 100.0 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
96d2r85a2
not modelled 100.0 16
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
97c2p0aA_
not modelled 100.0 15
PDB header:neuropeptide
Chain: A: PDB Molecule:synapsin-3;
PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp
98c3u9sI_
not modelled 100.0 22
PDB header:ligase
Chain: I: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
99c3wvqA_
not modelled 100.0 22
PDB header:biosynthetic protein
Chain: A: PDB Molecule:pgm1;
PDBTitle: structure of atp grasp protein
100d1kjqa3
not modelled 100.0 22
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
101c2qb5B_
not modelled 100.0 19
PDB header:transferase
Chain: B: PDB Molecule:inositol-tetrakisphosphate 1-kinase;
PDBTitle: crystal structure of human inositol 1,3,4-trisphosphate 5/6-kinase2 (itpk1) in complex with adp and mn2+
102d1ulza3
not modelled 100.0 18
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
103c5ks8B_
not modelled 100.0 18
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase subunit alpha;
PDBTitle: crystal structure of two-subunit pyruvate carboxylase from2 methylobacillus flagellatus
104c3ln7A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 pasteurella multocida
105d1e4ea1
not modelled 99.9 34
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
106d1uc8a2
not modelled 99.9 21
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Lysine biosynthesis enzyme LysX ATP-binding domain
107c3t9aA_
not modelled 99.9 15
PDB header:transferase
Chain: A: PDB Molecule:inositol pyrophosphate kinase;
PDBTitle: crystal structure of the catalytic domain of human diphosphoinositol2 pentakisphosphate kinase 2 (ppip5k2) in complex with amppnp at ph 7.0
108d1gsoa3
not modelled 99.9 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
109c4rcnA_
not modelled 99.9 24
PDB header:ligase
Chain: A: PDB Molecule:long-chain acyl-coa carboxylase;
PDBTitle: structure and function of a single-chain, multi-domain long-chain2 acyl-coa carboxylase
110d1ehia1
not modelled 99.9 32
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
111d1pk8a2
not modelled 99.9 11
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Synapsin C-terminal domain
112c4qskB_
not modelled 99.9 16
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of l. monocytogenes pyruvate carboxylase in complex2 with cyclic-di-amp
113c4hnvB_
not modelled 99.9 18
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of r54e mutant of s. aureus pyruvate carboxylase
114d1i7na2
not modelled 99.9 13
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Synapsin C-terminal domain
115c5i8iD_
not modelled 99.9 15
PDB header:hydrolase
Chain: D: PDB Molecule:urea amidolyase;
PDBTitle: crystal structure of the k. lactis urea amidolyase
116c3bg5B_
not modelled 99.9 18
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of staphylococcus aureus pyruvate carboxylase
117c3va7A_
not modelled 99.9 15
PDB header:ligase
Chain: A: PDB Molecule:klla0e08119p;
PDBTitle: crystal structure of the kluyveromyces lactis urea carboxylase
118c2qf7A_
not modelled 99.9 18
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase protein;
PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli
119d1iowa1
not modelled 99.9 44
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
120c1gshA_
not modelled 99.9 15
PDB header:glutathione biosynthesis ligase
Chain: A: PDB Molecule:glutathione biosynthetic ligase;
PDBTitle: structure of escherichia coli glutathione synthetase at ph 7.5

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below