Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3004_(cfp6)_3363358_3363696
DateThu Aug 8 16:20:17 BST 2019
Unique Job ID5a714f9b5f79f431
SequenceMAHFAVGFLT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.562 Y:18.975 Z:27.089
Model (left) based on template c2na7A_
Top template information
PDB header:apoptosis
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of human fas/cd95 death receptor
Confidence and coverage
Confidence: 60.8% Coverage: 17%
19 residues ( 17% of your sequence) have been modelled with 60.8% confidence by the single highest scoring template.
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2na7A_



60.8 37
PDB header:apoptosis
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of human fas/cd95 death receptor
2c2na7B_



57.1 37
PDB header:apoptosis
Chain: B: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of human fas/cd95 death receptor
3c2na7C_



57.1 37
PDB header:apoptosis
Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of human fas/cd95 death receptor
4c3kifD_



53.6 25
PDB header:sugar binding protein
Chain: D: PDB Molecule:5-bladed beta-propeller lectin;
PDBTitle: the crystal structures of two fragments truncated from 5-bladed beta-2 propeller lectin, tachylectin-2 (lib1-b7-18 and lib2-d2-15)
5d1e5wa2



31.5 17
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Third domain of FERM
6c4cvuA_



29.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:beta-mannosidase;
PDBTitle: structure of fungal beta-mannosidase from glycoside hydrolase family 22 of trichoderma harzianum
7d1j19a2



25.7 17
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Third domain of FERM
8c3k8rA_



25.6 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of protein of unknown function (yp_427503.1) from2 rhodospirillum rubrum atcc 11170 at 2.75 a resolution
9d1tl2a_



23.1 17
Fold:5-bladed beta-propeller
Superfamily:Tachylectin-2
Family:Tachylectin-2
10d1ef1a2



22.9 15
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Third domain of FERM
11c3kihC_



22.7 14
PDB header:sugar binding protein
Chain: C: PDB Molecule:5-bladed beta-propeller lectin;
PDBTitle: the crystal structures of two fragments truncated from 5-bladed beta-2 propeller lectin, tachylectin-2 (lib2-d2-15)
12d1isna2



21.7 13
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Third domain of FERM
13d1gg3a2



19.6 13
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Third domain of FERM
14d2cx1a2



18.6 23
Fold:Cystatin-like
Superfamily:Pre-PUA domain
Family:Hypothetical protein APE0525, N-terminal domain
15c5c2mA_



18.3 15
PDB header:structural protein
Chain: A: PDB Molecule:predicted protein;
PDBTitle: the de novo evolutionary emergence of a symmetrical protein is shaped2 by folding constraints
16d2zpya2



18.1 15
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Third domain of FERM
17d1h4ra2



16.4 11
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Third domain of FERM
18c2x8nA_



9.1 17
PDB header:structural genomics
Chain: A: PDB Molecule:cv0863;
PDBTitle: solution nmr structure of uncharacterized protein cv0863 from2 chromobacterium violaceum. northeast structural genomics target3 (nesg) target cvt3. ocsp target cv0863.
19c2i1jA_



9.0 17
PDB header:cell adhesion, membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution
20c3nqnB_



8.6 17
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein with unknown function. (dr_2006) from2 deinococcus radiodurans at 1.88 a resolution
21c3osvC_



not modelled 8.4 28
PDB header:structural protein
Chain: C: PDB Molecule:flagellar basal-body rod modification protein flgd;
PDBTitle: the crytsal structure of flgd from p. aeruginosa
22c2i1kA_



not modelled 7.6 17
PDB header:cell adhesion, membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin from spodoptera frugiperda reveals the coiled-coil domain at2 3.0 angstrom resolution
23c4h7lB_



not modelled 7.4 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of plim_4148 protein from planctomyces limnophilus
24c6d2qA_



not modelled 7.2 21
PDB header:signaling protein
Chain: A: PDB Molecule:ferm, rhogef (arhgef) and pleckstrin domain protein 1
PDBTitle: crystal structure of the ferm domain of zebrafish farp1
25c2lnzA_



not modelled 7.1 60
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin-like protein mdy2;
PDBTitle: solution structure of the get5 carboxyl domain from s. cerevisiae
26c3vejB_



not modelled 7.0 60
PDB header:protein binding
Chain: B: PDB Molecule:ubiquitin-like protein mdy2;
PDBTitle: crystal structure of the get5 carboxyl domain from s. cerevisiae
27c1e5wA_



not modelled 6.8 15
PDB header:membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: structure of isolated ferm domain and first long helix of moesin
28d1hnga1



not modelled 6.6 37
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
29d1rl6a2



not modelled 6.1 57
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
30d2zjre1



not modelled 6.0 43
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
31d2diga1



not modelled 5.7 32
Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
32d2j01h2



not modelled 5.6 43
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
33c2yowB_



not modelled 5.6 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:rbam17540;
PDBTitle: bacillus amyloliquefaciens cbm33
34c2e6xD_



not modelled 5.5 50
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein ttha1281;
PDBTitle: x-ray structure of tt1592 from thermus thermophilus hb8
35c2digA_



not modelled 5.5 32
PDB header:dna binding protein
Chain: A: PDB Molecule:lamin-b receptor;
PDBTitle: solusion structure of the todor domain of human lamin-b2 receptor
36c3c8lB_



not modelled 5.4 25
PDB header:unknown function
Chain: B: PDB Molecule:ftsz-like protein of unknown function;
PDBTitle: crystal structure of a ftsz-like protein of unknown function2 (npun_r1471) from nostoc punctiforme pcc 73102 at 1.22 a resolution
37c1u2pA_



not modelled 5.4 50
PDB header:hydrolase
Chain: A: PDB Molecule:low molecular weight protein-tyrosine-
PDBTitle: crystal structure of mycobacterium tuberculosis low2 molecular protein tyrosine phosphatase (mptpa) at 1.9a3 resolution
38d1dg9a_



not modelled 5.4 18
Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
39d2qamg2



not modelled 5.2 57
Fold:Ribosomal protein L6
Superfamily:Ribosomal protein L6
Family:Ribosomal protein L6
40c4a02A_



not modelled 5.2 9
PDB header:chitin binding protein
Chain: A: PDB Molecule:chitin binding protein;
PDBTitle: x-ray crystallographic structure of efcbm33a

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below