Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3006_(lppZ)_3364719_3365840
DateThu Aug 8 16:20:17 BST 2019
Unique Job IDaa3ae08c5e76533c
SequenceMWTTRLVRSG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:48.840 Y:55.203 Z:61.006
Model (left) based on template c3ho5B_
Top template information
PDB header:signaling protein
Chain: B: PDB Molecule:hedgehog-interacting protein;
PDBTitle: crystal structure of hedgehog-interacting protein (hhip) and sonic2 hedgehog (shh) complex
Confidence and coverage
Confidence:100.0% Coverage: 81%
302 residues ( 81% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ho5B_



100.0 17
PDB header:signaling protein
Chain: B: PDB Molecule:hedgehog-interacting protein;
PDBTitle: crystal structure of hedgehog-interacting protein (hhip) and sonic2 hedgehog (shh) complex
2c2wg3C_



100.0 18
PDB header:signaling protein
Chain: C: PDB Molecule:hedgehog-interacting protein;
PDBTitle: crystal structure of the complex between human hedgehog-2 interacting protein hip and desert hedgehog without calcium
3d1crua_



100.0 24
Fold:6-bladed beta-propeller
Superfamily:Soluble quinoprotein glucose dehydrogenase
Family:Soluble quinoprotein glucose dehydrogenase
4c3a9gA_



100.0 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of pqq-dependent sugar dehydrogenase apo-form
5c2ismA_



100.0 24
PDB header:sugar binding protein
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of the putative oxidoreductase (glucose2 dehydrogenase) (ttha0570) from thermus theromophilus hb8
6c3dasA_



100.0 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: structure of the pqq-bound form of aldose sugar2 dehydrogenase (adh) from streptomyces coelicolor
7c2g8sB_



100.0 22
PDB header:sugar binding protein
Chain: B: PDB Molecule:glucose/sorbosone dehydrogenases;
PDBTitle: crystal structure of the soluble aldose sugar dehydrogenase2 (asd) from escherichia coli in the apo-form
8c2qe8B_



99.8 13
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative hydrolase (ava_4197) from anabaena2 variabilis atcc 29413 at 1.35 a resolution
9d1pjxa_



99.8 12
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:SGL-like
10d2p4oa1



99.7 15
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:All0351-like
11d2dg1a1



99.7 13
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:SGL-like
12c3dr2A_



99.7 11
PDB header:hydrolase
Chain: A: PDB Molecule:exported gluconolactonase;
PDBTitle: structural and functional analyses of xc5397 from2 xanthomonas campestris: a gluconolactonase important in3 glucose secondary metabolic pathways
13c6fb3A_



99.7 17
PDB header:cell adhesion
Chain: A: PDB Molecule:teneurin-2;
PDBTitle: teneurin 2 partial extracellular domain
14c3g4hB_



99.7 11
PDB header:hydrolase
Chain: B: PDB Molecule:regucalcin;
PDBTitle: crystal structure of human senescence marker protein-30 (zinc bound)
15c3e5zA_



99.7 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative gluconolactonase;
PDBTitle: x-ray structure of the putative gluconolactonase in protein family2 pf08450. northeast structural genomics consortium target drr130.
16c5d9bA_



99.7 10
PDB header:hydrolase
Chain: A: PDB Molecule:luciferin regenerating enzyme;
PDBTitle: luciferin-regenerating enzyme solved by siras using xfel (refined2 against native data)
17c2ghsA_



99.6 14
PDB header:calcium-binding protein
Chain: A: PDB Molecule:agr_c_1268p;
PDBTitle: crystal structure of a calcium-binding protein, regucalcin2 (agr_c_1268) from agrobacterium tumefaciens str. c58 at 1.55 a3 resolution
18d2ghsa1



99.6 14
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:SGL-like
19c6gc1A_



99.6 15
PDB header:unknown function
Chain: A: PDB Molecule:nhl repeat-containing protein 2;
PDBTitle: crystal structure of trx-like and nhl repeat containing domains of2 human nhlrc2
20c2z2pA_



99.5 13
PDB header:lyase/antibiotic
Chain: A: PDB Molecule:virginiamycin b lyase;
PDBTitle: crystal structure of catalytically inactive h270a virginiamycin b2 lyase from staphylococcus aureus with quinupristin
21c2qc5A_



not modelled 99.5 18
PDB header:lyase
Chain: A: PDB Molecule:streptogramin b lactonase;
PDBTitle: streptogramin b lyase structure
22c6fayA_



not modelled 99.5 18
PDB header:cell adhesion
Chain: A: PDB Molecule:odz3 protein;
PDBTitle: teneurin3 monomer
23d1v04a_



not modelled 99.5 10
Fold:6-bladed beta-propeller
Superfamily:Calcium-dependent phosphotriesterase
Family:Serum paraoxonase/arylesterase 1, PON1
24c3s94A_



not modelled 99.5 14
PDB header:signaling protein
Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6;
PDBTitle: crystal structure of lrp6-e1e2
25c1n7dA_



not modelled 99.4 11
PDB header:lipid transport
Chain: A: PDB Molecule:low-density lipoprotein receptor;
PDBTitle: extracellular domain of the ldl receptor
26c3soqA_



not modelled 99.4 14
PDB header:protein binding/antagonist
Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6;
PDBTitle: the structure of the first ywtd beta propeller domain of lrp6 in2 complex with a dkk1 peptide
27c3fw0A_



not modelled 99.4 13
PDB header:lyase
Chain: A: PDB Molecule:peptidyl-glycine alpha-amidating monooxygenase;
PDBTitle: structure of peptidyl-alpha-hydroxyglycine alpha-amidating2 lyase (pal) bound to alpha-hydroxyhippuric acid (non-3 peptidic substrate)
28c6f0qB_



not modelled 99.3 16
PDB header:de novo protein
Chain: B: PDB Molecule:pizza6-ayw;
PDBTitle: crystal structure of pizza6-ayw
29c3hrpA_



not modelled 99.3 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of structural genomics protein of unknown function2 (np_812590.1) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a3 resolution
30c3s8vA_



not modelled 99.3 13
PDB header:signaling protein
Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6;
PDBTitle: crystal structure of lrp6-dkk1 complex
31c3qqzA_



not modelled 99.3 13
PDB header:metal binding protein
Chain: A: PDB Molecule:putative uncharacterized protein yjik;
PDBTitle: crystal structure of the c-terminal domain of the yjik protein from2 escherichia coli cft073
32d1npea_



not modelled 99.3 12
Fold:6-bladed beta-propeller
Superfamily:YWTD domain
Family:YWTD domain
33d1ijqa1



not modelled 99.2 10
Fold:6-bladed beta-propeller
Superfamily:YWTD domain
Family:YWTD domain
34c1ijqA_



not modelled 99.2 11
PDB header:lipid transport
Chain: A: PDB Molecule:low-density lipoprotein receptor;
PDBTitle: crystal structure of the ldl receptor ywtd-egf domain pair
35c3u4yA_



not modelled 99.2 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein (dtox_1751)2 from desulfotomaculum acetoxidans dsm 771.
36c3kyaA_



not modelled 99.2 9
PDB header:hydrolase
Chain: A: PDB Molecule:putative phosphatase;
PDBTitle: crystal structure of putative phosphatase (np_812416.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.77 a resolution
37c3tc9B_



not modelled 99.1 12
PDB header:hydrolase
Chain: B: PDB Molecule:hypothetical hydrolase;
PDBTitle: crystal structure of an auxiliary nutrient binding protein (bt_3476)2 from bacteroides thetaiotaomicron vpi-5482 at 2.23 a resolution
38c3vh0C_



not modelled 99.1 9
PDB header:protein binding/dna
Chain: C: PDB Molecule:uncharacterized protein ynce;
PDBTitle: crystal structure of e. coli ynce complexed with dna
39d1rwia_



not modelled 99.1 21
Fold:6-bladed beta-propeller
Superfamily:NHL repeat
Family:NHL repeat
40c6d69A_



not modelled 99.1 10
PDB header:protein binding
Chain: A: PDB Molecule:nhl repeat region of d. melanogaster thin;
PDBTitle: crystal structure of the nhl repeat region of d. melanogaster thin
41c2p9wA_



not modelled 99.1 12
PDB header:allergen
Chain: A: PDB Molecule:mal s 1 allergenic protein;
PDBTitle: crystal structure of the major malassezia sympodialis allergen mala s2 1
42c2fp8A_



not modelled 99.0 15
PDB header:lyase
Chain: A: PDB Molecule:strictosidine synthase;
PDBTitle: structure of strictosidine synthase, the biosynthetic entry to the2 monoterpenoid indole alkaloid family
43c4hw6D_



not modelled 99.0 10
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein, ipt/tig domain protein;
PDBTitle: crystal structure of an auxiliary nutrient binding protein2 (bacova_00264) from bacteroides ovatus atcc 8483 at 1.70 a resolution
44c3hfqB_



not modelled 98.9 11
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein lp_2219;
PDBTitle: crystal structure of the lp_2219 protein from lactobacillus plantarum.2 northeast structural genomics consortium target lpr118.
45c3mbrX_



not modelled 98.5 9
PDB header:transferase
Chain: X: PDB Molecule:glutamine cyclotransferase;
PDBTitle: crystal structure of the glutaminyl cyclase from xanthomonas2 campestris
46c4qrjA_



not modelled 98.5 12
PDB header:hydrolase
Chain: A: PDB Molecule:putative 6-phosphogluconolactonase;
PDBTitle: crystal structure of a putative 6-phosphogluconolactonase2 (bacuni_04672) from bacteroides uniformis atcc 8492 at 2.20 a3 resolution
47c6rteB_



not modelled 98.5 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome c;
PDBTitle: dihydro-heme d1 dehydrogenase nirn in complex with dhe
48d1q7fa_



not modelled 98.5 11
Fold:6-bladed beta-propeller
Superfamily:NHL repeat
Family:NHL repeat
49c3nolA_



not modelled 98.3 14
PDB header:transferase
Chain: A: PDB Molecule:glutamine cyclotransferase;
PDBTitle: crystal structure of zymomonas mobilis glutaminyl cyclase (trigonal2 form)
50c3fgbB_



not modelled 98.3 9
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein q89zh8_bactn;
PDBTitle: crystal structure of the q89zh8_bactn protein from bacteroides2 thetaiotaomicron. northeast structural genomics consortium target3 btr289b.
51c3bwsA_



not modelled 98.2 11
PDB header:unknown function
Chain: A: PDB Molecule:protein lp49;
PDBTitle: crystal structure of the leptospiral antigen lp49
52c6igbB_



not modelled 98.2 12
PDB header:hydrolase
Chain: B: PDB Molecule:periplasmic gluconolactonase, ppgl;
PDBTitle: the structure of pseudomonas aeruginosa periplasmic gluconolactonase,2 ppgl
53c3sbrF_



not modelled 98.2 12
PDB header:oxidoreductase
Chain: F: PDB Molecule:nitrous-oxide reductase;
PDBTitle: pseudomonas stutzeri nitrous oxide reductase, p1 crystal form with2 substrate
54c2iwaA_



not modelled 98.1 19
PDB header:transferase
Chain: A: PDB Molecule:glutamine cyclotransferase;
PDBTitle: unbound glutaminyl cyclotransferase from carica papaya.
55d1jofa_



not modelled 98.1 12
Fold:7-bladed beta-propeller
Superfamily:3-carboxy-cis,cis-mucoante lactonizing enzyme
Family:3-carboxy-cis,cis-mucoante lactonizing enzyme
56c5f30B_



not modelled 98.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:thiocyanate dehydrogenase;
PDBTitle: thiocyanate dehydrogenase from thioalkalivibrio paradoxus
57d1tl2a_



not modelled 98.0 17
Fold:5-bladed beta-propeller
Superfamily:Tachylectin-2
Family:Tachylectin-2
58d1fwxa2



not modelled 98.0 14
Fold:7-bladed beta-propeller
Superfamily:Nitrous oxide reductase, N-terminal domain
Family:Nitrous oxide reductase, N-terminal domain
59c2i0tB_



not modelled 98.0 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:aromatic amine dehydrogenase;
PDBTitle: crystal structure of phenylacetaldehyde derived r-2 carbinolamine adduct of aromatic amine dehydrogenase
60c6cmkB_



not modelled 97.8 10
PDB header:metal binding protein
Chain: B: PDB Molecule:aztd protein;
PDBTitle: crystal structure of citrobacter koseri aztd
61d1ri6a_



not modelled 97.8 11
Fold:7-bladed beta-propeller
Superfamily:Putative isomerase YbhE
Family:Putative isomerase YbhE
62c1fwxB_



not modelled 97.7 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitrous oxide reductase;
PDBTitle: crystal structure of nitrous oxide reductase from p. denitrificans
63c1nnoA_



not modelled 97.6 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitrite reductase;
PDBTitle: conformational changes occurring upon no binding in nitrite reductase2 from pseudomonas aeruginosa
64c1qniE_



not modelled 97.6 13
PDB header:oxidoreductase
Chain: E: PDB Molecule:nitrous-oxide reductase;
PDBTitle: crystal structure of nitrous oxide reductase from pseudomonas nautica,2 at 2.4a resolution
65c1gq1B_



not modelled 97.6 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome cd1 nitrite reductase;
PDBTitle: cytochrome cd1 nitrite reductase, y25s mutant, oxidised form
66d1qnia2



not modelled 97.6 16
Fold:7-bladed beta-propeller
Superfamily:Nitrous oxide reductase, N-terminal domain
Family:Nitrous oxide reductase, N-terminal domain
67c5i5iA_



not modelled 97.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitrous-oxide reductase;
PDBTitle: shewanella denitrificans nitrous oxide reductase, app form
68d1jmxb_



not modelled 97.5 9
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Quinohemoprotein amine dehydrogenase B chain
69d2bbkh_



not modelled 97.4 12
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Methylamine dehydrogenase, H-chain
70c2j57J_



not modelled 97.3 11
PDB header:oxidoreductase
Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain;
PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin.
71d1qksa2



not modelled 97.3 11
Fold:8-bladed beta-propeller
Superfamily:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Family:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
72c6ck1C_



not modelled 97.3 11
PDB header:metal binding protein
Chain: C: PDB Molecule:a1b2f4 protein;
PDBTitle: crystal structure of paracoccus denitrificans aztd
73c2h47F_



not modelled 97.2 8
PDB header:oxidoreductase/electron transport
Chain: F: PDB Molecule:aromatic amine dehydrogenase;
PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1)
74c3c75J_



not modelled 97.1 14
PDB header:oxidoreductase
Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain;
PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin
75c6fqlA_



not modelled 97.0 9
PDB header:rna binding protein
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase trim71;
PDBTitle: crystal structure of danio rerio lin41 filamin-nhl domains in complex2 with mab-10 3'utr 13mer rna
76c3nokB_



not modelled 97.0 15
PDB header:transferase
Chain: B: PDB Molecule:glutaminyl cyclase;
PDBTitle: crystal structure of myxococcus xanthus glutaminyl cyclase
77d1nira2



not modelled 97.0 10
Fold:8-bladed beta-propeller
Superfamily:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Family:C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
78d2madh_



not modelled 97.0 10
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Methylamine dehydrogenase, H-chain
79c3dsmA_



not modelled 97.0 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bacuni_02894;
PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d.
80c1l0qC_



not modelled 96.8 15
PDB header:protein binding
Chain: C: PDB Molecule:surface layer protein;
PDBTitle: tandem yvtn beta-propeller and pkd domains from an archaeal surface2 layer protein
81d2bgra1



not modelled 96.5 12
Fold:8-bladed beta-propeller
Superfamily:DPP6 N-terminal domain-like
Family:DPP6 N-terminal domain-like
82c6qk7A_



not modelled 96.4 12
PDB header:translation
Chain: A: PDB Molecule:elongator complex protein 1;
PDBTitle: elongator catalytic subcomplex elp123 lobe
83c4e54B_



not modelled 96.3 10
PDB header:dna binding protein/dna
Chain: B: PDB Molecule:dna damage-binding protein 2;
PDBTitle: damaged dna induced uv-damaged dna-binding protein (uv-ddb)2 dimerization and its roles in chromatinized dna repair
84c2iwkB_



not modelled 96.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitrous oxide reductase;
PDBTitle: inhibitor-bound form of nitrous oxide reductase from2 achromobacter cycloclastes at 1.7 angstrom resolution
85c3no2A_



not modelled 96.1 13
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein of unknown function (baccac_01654) from2 bacteroides caccae at 1.35 a resolution
86c3zwuB_



not modelled 96.0 16
PDB header:hydrolase
Chain: B: PDB Molecule:alkaline phosphatase phox;
PDBTitle: pseudomonas fluorescens phox in complex with vanadate, a2 transition state analogue
87c2ivzD_



not modelled 96.0 11
PDB header:protein transport/hydrolase
Chain: D: PDB Molecule:protein tolb;
PDBTitle: structure of tolb in complex with a peptide of the colicin2 e9 t-domain
88c5c2mA_



not modelled 96.0 18
PDB header:structural protein
Chain: A: PDB Molecule:predicted protein;
PDBTitle: the de novo evolutionary emergence of a symmetrical protein is shaped2 by folding constraints
89c5hrmB_



not modelled 95.7 12
PDB header:hydrolase
Chain: B: PDB Molecule:haloalkylphosphorus hydrolase;
PDBTitle: crystal structure of phosphotriesterase from sphingobium sp. tcm1
90c6nd4H_



not modelled 94.9 9
PDB header:ribosome
Chain: H: PDB Molecule:utp17;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
91c2ecfA_



not modelled 94.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:dipeptidyl peptidase iv;
PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia
92c2w8bB_



not modelled 94.7 10
PDB header:protein transport/membrane protein
Chain: B: PDB Molecule:protein tolb;
PDBTitle: crystal structure of processed tolb in complex with pal
93c5c2vB_



not modelled 94.2 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:hydrazine synthase beta subunit;
PDBTitle: kuenenia stuttgartiensis hydrazine synthase
94c5ch2A_



not modelled 94.0 17
PDB header:transferase
Chain: A: PDB Molecule:putative polycomb protein eed;
PDBTitle: crystal structure of an active polycomb repressive complex 2 in the2 basal state
95c3ottB_



not modelled 93.8 11
PDB header:transcription
Chain: B: PDB Molecule:two-component system sensor histidine kinase;
PDBTitle: crystal structure of the extracellular domain of the putative one2 component system bt4673 from b. thetaiotaomicron
96d1orva1



not modelled 93.7 12
Fold:8-bladed beta-propeller
Superfamily:DPP6 N-terminal domain-like
Family:DPP6 N-terminal domain-like
97c6nd4S_



not modelled 93.6 10
PDB header:ribosome
Chain: S: PDB Molecule:utp18;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
98c5a5uB_



not modelled 93.4 15
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: structure of mammalian eif3 in the context of the 43s preinitiation2 complex
99d1xfda1



not modelled 93.3 9
Fold:8-bladed beta-propeller
Superfamily:DPP6 N-terminal domain-like
Family:DPP6 N-terminal domain-like
100c5a1vK_



not modelled 92.7 12
PDB header:transport protein
Chain: K: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat linkage i
101c6nd4O_



not modelled 92.1 10
PDB header:ribosome
Chain: O: PDB Molecule:utp1;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
102c5yznA_



not modelled 92.1 11
PDB header:hydrolase
Chain: A: PDB Molecule:acyl-peptide hydrolase, putative;
PDBTitle: crystal structure of s9 peptidase (active form) from deinococcus2 radiodurans r1
103c4yczA_



not modelled 91.9 9
PDB header:structural protein
Chain: A: PDB Molecule:fusion protein of sec13 and nup145c;
PDBTitle: y-complex hub (nup85-nup120-nup145c-sec13 complex) from m. thermophila2 (a.k.a. t. heterothallica)
104c3q6kA_



not modelled 91.2 17
PDB header:protein binding
Chain: A: PDB Molecule:43.2 kda salivary protein;
PDBTitle: salivary protein from lutzomyia longipalpis
105d1l0qa2



not modelled 90.9 14
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:YVTN repeat
106c5yylA_



not modelled 90.2 15
PDB header:signaling protein
Chain: A: PDB Molecule:major royal jelly protein 1;
PDBTitle: structure of major royal jelly protein 1 oligomer
107d1h6la_



not modelled 90.2 14
Fold:6-bladed beta-propeller
Superfamily:Thermostable phytase (3-phytase)
Family:Thermostable phytase (3-phytase)
108c5i2tA_



not modelled 89.5 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:periodic tryptophan protein 2;
PDBTitle: domain characterization of the wd protein pwp2 and their relevance in2 ribosome biogenesis
109c5oljA_



not modelled 89.4 10
PDB header:hydrolase
Chain: A: PDB Molecule:dipeptidyl peptidase iv;
PDBTitle: crystal structure of porphyromonas gingivalis dipeptidyl peptidase 4
110d1pbyb_



not modelled 89.2 12
Fold:7-bladed beta-propeller
Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase
Family:Quinohemoprotein amine dehydrogenase B chain
111c2j04B_



not modelled 87.3 11
PDB header:transcription
Chain: B: PDB Molecule:ydr362cp;
PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor iiic
112c4wjlB_



not modelled 86.2 12
PDB header:membrane protein
Chain: B: PDB Molecule:inactive dipeptidyl peptidase 10;
PDBTitle: structure of human dipeptidyl peptidase 10 (dppy): a modulator of2 neuronal kv4 channels
113c6nd4W_



not modelled 85.7 11
PDB header:ribosome
Chain: W: PDB Molecule:utp7;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
114c6em5m_



not modelled 85.3 9
PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l14-a;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
115c4xfvA_



not modelled 84.9 8
PDB header:translation
Chain: A: PDB Molecule:elongator complex protein 2;
PDBTitle: crystal structure of elp2
116c3dm0A_



not modelled 84.5 14
PDB header:sugar binding protein,signaling protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with rack1;
PDBTitle: maltose binding protein fusion with rack1 from a. thaliana
117c4a2lD_



not modelled 83.5 11
PDB header:transcription
Chain: D: PDB Molecule:two-component system sensor histidine kinase/response;
PDBTitle: structure of the periplasmic domain of the heparin and heparan2 sulphate sensing hybrid two component system bt4663 in apo and3 ligand bound forms
118c1k32E_



not modelled 83.5 8
PDB header:hydrolase
Chain: E: PDB Molecule:tricorn protease;
PDBTitle: crystal structure of the tricorn protease
119c6iyyA_



not modelled 82.9 10
PDB header:lipid binding protein
Chain: A: PDB Molecule:wd repeat domain phosphoinositide-interacting protein 3;
PDBTitle: crystal structure of human wipi3,loop deletion mutant
120c3kifD_



not modelled 82.6 15
PDB header:sugar binding protein
Chain: D: PDB Molecule:5-bladed beta-propeller lectin;
PDBTitle: the crystal structures of two fragments truncated from 5-bladed beta-2 propeller lectin, tachylectin-2 (lib1-b7-18 and lib2-d2-15)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite