Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3007c_(-)_3365846_3366460
DateThu Aug 8 16:20:17 BST 2019
Unique Job ID1c633d05c962f214
SequenceVSEDVARIHD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:47.182 Y:41.156 Z:46.280
Model (left) based on template c3rh7A_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 78%
159 residues ( 78% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3rh7A_



100.0 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution
2c5zc2B_



100.0 19
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
3c4hx6D_



100.0 19
PDB header:oxidoreductase
Chain: D: PDB Molecule:oxidoreductase;
PDBTitle: streptomyces globisporus c-1027 nadh:fad oxidoreductase sgce6
4c3nfwB_



100.0 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:flavin reductase-like, fmn-binding protein;
PDBTitle: crystal structure of nitrilotriacetate monooxygenase component b2 (a0r521 homolog) from mycobacterium thermoresistibile
5c2qckA_



100.0 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavin reductase domain protein;
PDBTitle: crystal structure of flavin reductase domain protein (yp_831077.1)2 from arthrobacter sp. fb24 at 1.90 a resolution
6c3k87B_



100.0 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:chlorophenol-4-monooxygenase component 1;
PDBTitle: crystal structure of nadh:fad oxidoreductase (tftc) - fad2 complex
7c3pftA_



100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavin reductase;
PDBTitle: crystal structure of untagged c54a mutant flavin reductase (dszd) in2 complex with fmn from mycobacterium goodii
8d1wgba_



100.0 23
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:NADH:FMN oxidoreductase-like
9c2r0xA_



100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:possible flavin reductase;
PDBTitle: crystal structure of a putative flavin reductase (ycdh, hs_1225) from2 haemophilus somnus 129pt at 1.06 a resolution
10c3cb0B_



100.0 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:4-hydroxyphenylacetate 3-monooxygenase;
PDBTitle: cobr
11c4l82D_



100.0 21
PDB header:oxidoreductase
Chain: D: PDB Molecule:rifea.00250.a;
PDBTitle: structure of a putative oxidoreductase from rickettsia felis
12c2d38A_



100.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical nadh-dependent fmn oxidoreductase;
PDBTitle: the crystal structure of flavin reductase hpac complexed with nadp+
13c4xhyA_



100.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavin reductase domain protein, fmn-binding protein;
PDBTitle: nadh:fmn oxidoreductase from paracoccus denitrificans
14c2ecrA_



100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavin reductase component (hpac) of 4-hydroxyphenylacetate
PDBTitle: crystal structure of the ligand-free form of the flavin reductase2 component (hpac) of 4-hydroxyphenylacetate 3-monooxygenase
15d1i0ra_



100.0 21
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:NADH:FMN oxidoreductase-like
16c4f07A_



100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:styrene monooxygenase component 2;
PDBTitle: structure of the styrene monooxygenase flavin reductase (smob) from2 pseudomonas putida s12
17d1rz0a_



100.0 25
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:NADH:FMN oxidoreductase-like
18c3bnkB_



100.0 16
PDB header:electron transport
Chain: B: PDB Molecule:flavoredoxin;
PDBTitle: x-ray crystal structure of flavoredoxin from methanosarcina2 acetivorans
19d1usca_



100.0 21
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:NADH:FMN oxidoreductase-like
20c2r6vA_



100.0 14
PDB header:flavoprotein
Chain: A: PDB Molecule:uncharacterized protein ph0856;
PDBTitle: crystal structure of fmn-binding protein (np_142786.1) from pyrococcus2 horikoshii at 1.35 a resolution
21d1ejea_



not modelled 100.0 16
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:NADH:FMN oxidoreductase-like
22c3e4vA_



not modelled 100.0 17
PDB header:flavoprotein
Chain: A: PDB Molecule:nadh:fmn oxidoreductase like protein;
PDBTitle: crystal structure of nadh:fmn oxidoreductase like protein in complex2 with fmn (yp_544701.1) from methylobacillus flagellatus kt at 1.40 a3 resolution
23c3hmzA_



not modelled 100.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavin reductase domain protein, fmn-binding;
PDBTitle: crystal structure of a fmn-binding domain of flavin reductases-like2 enzyme (sbal_0626) from shewanella baltica os155 at 1.50 a resolution
24c3bpkB_



not modelled 100.0 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b;
PDBTitle: crystal structure of nitrilotriacetate monooxygenase component b from2 bacillus cereus
25c3fgeA_



not modelled 100.0 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative flavin reductase with split barrel domain;
PDBTitle: crystal structure of putative flavin reductase with split barrel2 domain (yp_750721.1) from shewanella frigidimarina ncimb 400 at 1.743 a resolution
26c2d5mA_



not modelled 100.0 19
PDB header:electron transport
Chain: A: PDB Molecule:flavoredoxin;
PDBTitle: flavoredoxin of desulfovibrio vulgaris (miyazaki f)
27c4z85A_



not modelled 100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-nitrobenzoate nitroreductase;
PDBTitle: crystal structur of pseudomonas fluorescens 2-nitrobenzoate 2-2 nitroreductase nbaa
28c3b5mD_



not modelled 99.9 12
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved uncharacterized protein from2 rhodopirellula baltica
29d2imla1



not modelled 99.1 20
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
30d2nr4a1



not modelled 98.4 17
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
31c2ptfB_



not modelled 98.3 14
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein mth_863;
PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn
32d2ptfa1



not modelled 98.2 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
33c2kn9A_



not modelled 97.5 5
PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin;
PDBTitle: solution structure of zinc-substituted rubredoxin b (rv3250c) from2 mycobacterium tuberculosis. seattle structural genomics center for3 infectious disease target mytud.01635.a
34c2q9kA_



not modelled 96.1 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative oxidoreductase (exig_1997) from2 exiguobacterium sibiricum 255-15 at 1.59 a resolution
35d1lkoa2



not modelled 96.0 23
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
36c5escD_



not modelled 95.1 13
PDB header:oxidoreductase
Chain: D: PDB Molecule:hupz;
PDBTitle: crystal structure of group a streptococcus hupz
37d1yuza2



not modelled 95.0 5
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
38d1nnqa2



not modelled 94.8 15
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
39d1flma_



not modelled 94.7 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
40c2htdB_



not modelled 94.6 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:predicted flavin-nucleotide-binding protein from cog3576
PDBTitle: crystal structure of a putative pyridoxamine 5'-phosphate oxidase2 (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution
41c2hr5B_



not modelled 93.8 12
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
42c1dvbA_



not modelled 92.5 23
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
43c1yuzB_



not modelled 91.7 5
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
44c3tgvD_



not modelled 91.4 10
PDB header:heme binding protein
Chain: D: PDB Molecule:heme-binding protein hutz;
PDBTitle: crystal structure of hutz,the heme storsge protein from vibrio2 cholerae
45c4tpuA_



not modelled 91.2 11
PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin;
PDBTitle: crystal structure of ferredoxin-dependent disulfide reductase from2 methanosarcina acetivorans
46d1vl7a_



not modelled 89.0 9
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
47d6rxna_



not modelled 87.1 7
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
48d1qcva_



not modelled 86.3 7
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
49d1iu5a_



not modelled 85.7 9
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
50d4rxna_



not modelled 85.5 14
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
51d2dsxa1



not modelled 85.5 9
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
52d1rb9a_



not modelled 85.5 8
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
53d2rdva_



not modelled 85.4 7
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
54d1iroa_



not modelled 85.4 14
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
55c2ms3A_



not modelled 85.3 0
PDB header:electron transport
Chain: A: PDB Molecule:anaerobic nitric oxide reductase flavorubredoxin;
PDBTitle: the nmr structure of the rubredoxin domain of the no reductase2 flavorubredoxin from escherichia coli
56d1s24a_



not modelled 85.3 7
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
57c1s24A_



not modelled 85.3 7
PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin 2;
PDBTitle: rubredoxin domain ii from pseudomonas oleovorans
58d1brfa_



not modelled 85.2 7
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
59d1h7va_



not modelled 84.8 20
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
60c2v3bB_



not modelled 84.3 7
PDB header:oxidoreductase
Chain: B: PDB Molecule:rubredoxin 2;
PDBTitle: crystal structure of the electron transfer complex rubredoxin -2 rubredoxin reductase from pseudomonas aeruginosa.
61c2m4yA_



not modelled 82.1 0
PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin;
PDBTitle: rubredoxin type protein from mycobacterium ulcerans
62d1w9aa_



not modelled 79.6 14
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
63c3f7eB_



not modelled 65.8 15
PDB header:unknown function
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-
PDBTitle: msmeg_3380 f420 reductase
64c3dmbA_



not modelled 63.3 4
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like
PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution
65c3u34D_



not modelled 62.8 6
PDB header:protein binding
Chain: D: PDB Molecule:general stress protein;
PDBTitle: crystal structure of the general stress fmn/fad binding protein from2 the phytopathogen xanthomonas citri
66c3db0B_



not modelled 54.3 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:lin2891 protein;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution
67d2fhqa1



not modelled 52.2 9
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
68c2re7A_



not modelled 43.5 3
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution
69c3ec6A_



not modelled 41.0 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:general stress protein 26;
PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne
70d2htia1



not modelled 40.8 5
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
71c2htiA_



not modelled 40.8 5
PDB header:fmn-binding protein
Chain: A: PDB Molecule:bh0577 protein;
PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution
72c5z58w_



not modelled 33.1 8
PDB header:splicing
Chain: W: PDB Molecule:
PDBTitle: cryo-em structure of a human activated spliceosome (early bact) at 4.92 angstrom.
73d2i02a1



not modelled 31.8 16
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
74d2asfa1



not modelled 30.6 16
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
75d1rfea_



not modelled 29.4 11
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
76c3gasA_



not modelled 28.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:heme oxygenase;
PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme
77c2ig6B_



not modelled 26.7 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:nimc/nima family protein;
PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution
78c4a17Y_



not modelled 25.7 0
PDB header:ribosome
Chain: Y: PDB Molecule:rpl37a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
79c3izrm_



not modelled 25.7 15
PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l23 (l14p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
80d1pfva3



not modelled 25.1 15
Fold:Rubredoxin-like
Superfamily:Methionyl-tRNA synthetase (MetRS), Zn-domain
Family:Methionyl-tRNA synthetase (MetRS), Zn-domain
81d2hq7a1



not modelled 24.7 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
82c3j39p_



not modelled 24.7 8
PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l17;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
83c3cc4Z_



not modelled 23.7 0
PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: co-crystal structure of anisomycin bound to the 50s ribosomal subunit
84c2hhzA_



not modelled 23.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution
85d1ffkw_



not modelled 23.4 8
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
86c1yshD_



not modelled 23.4 15
PDB header:structural protein/rna
Chain: D: PDB Molecule:ribosomal protein l37a;
PDBTitle: localization and dynamic behavior of ribosomal protein l30e
87d1vqoz1



not modelled 23.3 0
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
88c2qa4Z_



not modelled 23.3 0
PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: a more complete structure of the the l7/l12 stalk of the2 haloarcula marismortui 50s large ribosomal subunit
89c3zf7o_



not modelled 23.2 0
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l13a, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
90c2zkrz_



not modelled 22.5 0
PDB header:ribosomal protein/rna
Chain: Z: PDB Molecule:e site t-rna;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
91c4b6ap_



not modelled 22.4 0
PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l17-a;
PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1
92d1jj2y_



not modelled 22.3 8
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
93c3j21i_



not modelled 21.5 8
PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l13p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
94d2arza1



not modelled 20.0 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
95d1mkya3



not modelled 19.8 15
Fold:Alpha-lytic protease prodomain-like
Superfamily:Probable GTPase Der, C-terminal domain
Family:Probable GTPase Der, C-terminal domain
96c5m30B_



not modelled 19.1 12
PDB header:secretion system
Chain: B: PDB Molecule:type vi secretion protein;
PDBTitle: structure of tssk from t6ss eaec in complex with nanobody nb18
97c1s1i9_



not modelled 18.7 0
PDB header:ribosome
Chain: 9: PDB Molecule:60s ribosomal protein l43;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s4 ribosomal subunit is in file 1s1h.
98c2m6oA_



not modelled 18.6 29
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the actinobacterial transcription factor rbpa binds to the principal2 sigma subunit of rna polymerase
99c2lv2A_



not modelled 18.5 6
PDB header:transcription
Chain: A: PDB Molecule:insulinoma-associated protein 1;
PDBTitle: solution nmr structure of c2h2-type zinc-fingers 4 and 5 from human2 insulinoma-associated protein 1 (fragment 424-497), northeast3 structural genomics consortium target hr7614b

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